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Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 7LJ3 | 23388 | 2023-08-18 | 2021-01-28 | 2.9 | 2.92 | — | 3.4 | 0.005 | 0.72 | 0.0 | 0.04 | 17.12 | 0.00 | 1.041 | 27.61 | 3.30 | 3.6 | 96.0 | 0.4 | 0.29 | 0.10 | 0.23 | -0.14 | 2.9 | 0.003 | 0.60 | 0.0 | 0.03 | 19.24 | 0.00 | 2.017 | 7.67 | 4.04 | 4.5 | 95.4 | 0.2 | 2.58 | 1.42 | 0.22 | 0.79 | 1.76 | 25714 | 2564 | 12 | 225 | 0 | 0 | 0 | logfile |
✔ | 7oTi | 13060 | 2023-08-11 | 2021-06-10 | 4.2 | 4.80 | — | 7.9 | 0.014 | 1.99 | 12.0 | 0.10 | 16.95 | 0.02 | 2.507 | 0.59 | 4.71 | 10.8 | 87.9 | 1.4 | -3.63 | 0.36 | 0.23 | — | 4.9 | 0.003 | 0.86 | 0.0 | 0.04 | 14.40 | 0.00 | 2.119 | 20.52 | 0.00 | 7.2 | 92.3 | 0.5 | -1.27 | 1.77 | 0.52 | 0.51 | — | 9171 | 1182 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 8FZR | 29638 | 2023-08-09 | 2023-01-29 | 3.6 | 5.09 | 4.10 | 4.1 | 0.002 | 0.48 | 0.0 | 0.03 | 15.49 | 0.00 | 2.234 | 12.34 | 6.97 | 4.6 | 94.4 | 1.0 | -1.87 | 0.52 | 0.24 | 0.50 | 4.2 | 0.003 | 0.69 | 0.0 | 0.04 | 18.82 | 0.00 | 2.121 | 20.51 | 0.22 | 4.6 | 95.2 | 0.2 | -1.85 | 1.70 | 0.83 | 0.65 | 0.78 | 5711 | 503 | 3 | 77 | 1 | 0 | 0 | logfile |
✔ | 7D58 | 30577 | 2023-08-25 | 2020-09-25 | 2.9 | 3.51 | — | 5.3 | 0.002 | 0.66 | 0.0 | 0.54 | 13.94 | 0.00 | 2.139 | 8.32 | 0.09 | 5.8 | 94.2 | 0.0 | -3.64 | 0.55 | 0.24 | -0.02 | 3.3 | 0.006 | 1.28 | 0.0 | 0.17 | 17.76 | 0.01 | 2.107 | 18.57 | 2.59 | 5.9 | 94.1 | 0.0 | -2.10 | 2.19 | 0.79 | 0.77 | 0.98 | 40568 | 4980 | 26 | 46 | 8 | 0 | 0 | logfile |
✔ | 8GTB | 34248 | 2023-08-14 | 2022-09-08 | 3.43 | 3.83 | 2.04 | 5.0 | 0.007 | 0.71 | 0.0 | 0.04 | 12.85 | 0.00 | 2.213 | 7.43 | 0.00 | 3.1 | 96.9 | 0.0 | -3.27 | 0.48 | 0.25 | 0.01 | 3.9 | 0.004 | 0.74 | 0.0 | 0.04 | 15.89 | 0.00 | 2.107 | 9.16 | 0.50 | 3.4 | 96.6 | 0.0 | -0.97 | 3.18 | 0.74 | 0.86 | 1.81 | 17136 | 2340 | 18 | 0 | 0 | 0 | 0 | logfile |
✔ | 7BZX | 30262 | 2023-08-09 | 2020-04-28 | 4.0 | 4.19 | — | 3.2 | 0.019 | 2.22 | 9.0 | 0.12 | 8.56 | 0.01 | 2.485 | 2.40 | 0.00 | 6.6 | 92.1 | 1.3 | -2.90 | 0.47 | 0.25 | — | 2.8 | 0.006 | 1.18 | 0.0 | 0.05 | 9.20 | 0.01 | 2.035 | 27.91 | 0.00 | 24.1 | 75.8 | 0.1 | -4.93 | 2.97 | 0.75 | 0.58 | — | 5652 | 1154 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 7JSH | 22454 | 2023-08-10 | 2020-08-14 | 4.4 | 7.07 | — | 17.0 | 0.001 | 0.20 | 0.0 | 0.02 | 8.81 | 0.00 | 2.581 | 0.00 | 0.00 | 13.1 | 83.7 | 3.2 | -3.27 | 0.49 | 0.25 | — | 5.3 | 0.005 | 1.30 | 0.0 | 0.05 | 13.69 | 0.01 | 1.942 | 27.17 | 0.00 | 31.8 | 67.9 | 0.3 | -5.48 | 6.11 | 0.73 | 0.61 | — | 7916 | 1904 | 8 | 15 | 0 | 0 | 0 | logfile |
✔ | 7DZW | 30915 | 2023-08-13 | 2021-01-26 | 3.45 | 4.19 | 3.55 | 3.3 | 0.019 | 2.27 | 0.0 | 0.00 | 4.81 | 0.01 | 2.240 | 2.28 | 0.00 | 5.1 | 93.3 | 1.6 | -1.27 | 0.44 | 0.25 | — | 3.3 | 0.003 | 0.81 | 0.0 | 0.00 | 4.68 | 0.00 | 2.178 | 3.51 | 0.00 | 11.9 | 88.0 | 0.1 | -2.05 | 1.99 | 0.77 | 0.73 | — | 13452 | 3363 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 7oLE | 12979 | 2023-08-19 | 2021-05-19 | 3.41 | 4.34 | 3.59 | 3.9 | 0.013 | 1.74 | 25.0 | 0.10 | 15.12 | 0.01 | 1.371 | 42.05 | 0.38 | 17.2 | 81.9 | 0.8 | -5.68 | 0.55 | 0.26 | -0.19 | 3.6 | 0.005 | 0.85 | 0.0 | 0.04 | 15.96 | 0.00 | 2.067 | 24.45 | 0.57 | 11.8 | 88.0 | 0.2 | -2.00 | 1.97 | 0.76 | 0.74 | 0.66 | 26995 | 2899 | 14 | 0 | 1129 | 0 | 0 | logfile |
✔ | 5N6W | 3595 | 2023-08-25 | 2017-02-16 | 4.2 | 4.31 | — | 4.2 | 0.001 | 0.36 | 0.0 | 0.04 | 4.92 | 0.00 | 2.309 | 3.73 | 0.00 | 17.7 | 79.7 | 2.6 | -5.61 | 0.44 | 0.27 | — | 4.2 | 0.003 | 0.69 | 0.0 | 0.04 | 11.38 | 0.01 | 1.946 | 14.52 | 0.13 | 11.9 | 87.4 | 0.7 | -3.87 | 1.92 | 0.71 | 0.71 | — | 40752 | 2512 | 16 | 0 | 0 | 0 | 20032 | logfile |
✔ | 7DZY | 30921 | 2023-08-15 | 2021-01-26 | 3.6 | 3.83 | 3.38 | 3.1 | 0.020 | 2.12 | 0.0 | 0.00 | 4.32 | 0.01 | 1.980 | 3.14 | 0.00 | 3.7 | 95.4 | 0.9 | -0.42 | 0.43 | 0.27 | — | 3.3 | 0.003 | 0.83 | 0.0 | 0.00 | 5.21 | 0.00 | 2.105 | 3.02 | 0.00 | 10.5 | 89.3 | 0.2 | -2.46 | 2.13 | 0.71 | 0.70 | — | 18708 | 4677 | 9 | 0 | 0 | 0 | 0 | logfile |
✔ | 7JMF | 22392 | 2023-08-14 | 2020-07-31 | 4.5 | 5.06 | — | 4.7 | 0.005 | 0.98 | 0.0 | 0.05 | 10.23 | 0.01 | 1.373 | 8.08 | 0.36 | 11.2 | 88.6 | 0.2 | -4.91 | 0.54 | 0.27 | — | 7.7 | 0.004 | 0.94 | 0.0 | 0.05 | 11.59 | 0.01 | 1.145 | 21.14 | 0.00 | 11.3 | 88.5 | 0.2 | -3.66 | 1.53 | 0.76 | 0.56 | — | 120756 | 13500 | 12 | 0 | 3608 | 0 | 0 | logfile |
✔ | 5G2Y | 3332 | 2023-08-13 | 2016-04-16 | 4.5 | 4.38 | — | 3.8 | 0.001 | 0.22 | 0.0 | 0.01 | 11.90 | 0.00 | 2.269 | 2.32 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.58 | 0.28 | — | 3.7 | 0.007 | 1.02 | 0.0 | 0.05 | 23.60 | 0.01 | 1.933 | 73.59 | 0.00 | 0.0 | 0.0 | 0.0 | — | 2.96 | 0.89 | 0.78 | — | 13494 | 0 | 1 | 630 | 0 | 0 | 0 | logfile |
✔ | 3KTT | 5148 | 2023-08-09 | 2009-11-25 | 4.0 | 2.33 | — | 4.5 | 0.020 | 2.86 | 20.0 | 0.20 | 15.20 | 0.01 | 1.652 | 179.94 | 7.82 | 6.3 | 89.4 | 4.3 | -0.59 | 0.27 | 0.28 | — | 1.6 | 0.005 | 1.21 | 0.0 | 0.05 | 17.07 | 0.01 | 2.016 | 34.63 | 0.49 | 11.5 | 87.3 | 1.2 | -2.51 | 2.08 | 0.31 | 0.43 | — | 3855 | 513 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 6Q2J | 20572 | 2023-08-13 | 2019-08-08 | 4.1 | 4.32 | — | 4.1 | 0.006 | 0.98 | 0.0 | 0.06 | 8.67 | 0.01 | 1.677 | 4.24 | 0.13 | 5.0 | 94.8 | 0.1 | -3.22 | 0.52 | 0.28 | — | 4.2 | 0.003 | 0.79 | 0.0 | 0.05 | 12.08 | 0.00 | 2.100 | 11.28 | 0.00 | 5.5 | 94.5 | 0.0 | -1.64 | 2.03 | 0.68 | 0.58 | — | 13796 | 1738 | 8 | 0 | 22 | 0 | 0 | logfile |
✔ | 7EGA | 31110 | 2023-08-21 | 2021-03-24 | 4.1 | 4.55 | — | 4.1 | 0.008 | 1.08 | 35.0 | 0.07 | 16.87 | 0.01 | 1.445 | 18.65 | 3.89 | 6.5 | 93.1 | 0.4 | -3.75 | 0.60 | 0.28 | — | 3.9 | 0.005 | 0.75 | 0.0 | 0.04 | 15.60 | 0.00 | 1.890 | 17.26 | 0.01 | 6.0 | 93.9 | 0.1 | -0.67 | 1.39 | 0.75 | 0.55 | — | 85697 | 10273 | 49 | 170 | 11 | 0 | 0 | logfile |
✔ | 6C9K | 7437 | 2023-08-24 | 2018-01-26 | 3.49 | 5.32 | — | 5.0 | 0.016 | 1.08 | 0.0 | 0.07 | 11.33 | 0.01 | 2.388 | 0.77 | 0.00 | 0.6 | 99.4 | 0.0 | 1.74 | 0.55 | 0.28 | 0.81 | 5.0 | 0.003 | 0.58 | 0.0 | 0.04 | 14.68 | 0.00 | 2.172 | 14.08 | 0.15 | 1.7 | 98.3 | 0.0 | 3.68 | 0.87 | 0.81 | 0.66 | -0.16 | 37632 | 4923 | 24 | 0 | 0 | 0 | 0 | logfile |
✔ | 5FN1 | 3236 | 2023-08-11 | 2015-11-10 | 3.9 | 4.00 | — | 4.7 | 0.009 | 1.18 | 0.0 | 0.07 | 11.47 | 0.00 | 0.877 | 53.81 | 0.00 | 8.8 | 88.4 | 2.8 | -3.37 | 0.24 | 0.29 | 0.57 | 3.9 | 0.005 | 0.87 | 0.0 | 0.04 | 16.79 | 0.01 | 1.856 | 24.11 | 1.08 | 13.3 | 85.7 | 1.0 | -1.33 | 2.15 | 0.41 | 0.75 | 0.99 | 61308 | 3906 | 36 | 90 | 0 | 0 | 30078 | logfile |
✔ | 6RUo | 10007 | 2023-08-27 | 2019-05-28 | 3.5 | 3.56 | — | 4.0 | 0.007 | 1.05 | 0.0 | 0.06 | 13.11 | 0.01 | 2.170 | 7.99 | 0.40 | 10.5 | 89.4 | 0.1 | -4.99 | 0.53 | 0.29 | 0.05 | 3.5 | 0.004 | 0.80 | 0.0 | 0.05 | 17.28 | 0.00 | 2.059 | 18.24 | 0.66 | 7.0 | 93.0 | 0.0 | -2.70 | 2.38 | 0.67 | 0.58 | 0.65 | 50792 | 6086 | 26 | 93 | 8 | 0 | 0 | logfile |
✔ | 7U6V | 26381 | 2023-08-13 | 2022-03-06 | 4.1 | 3.17 | 4.21 | 6.8 | 0.002 | 0.52 | 0.0 | 0.04 | 13.79 | 0.00 | 1.948 | 13.74 | 1.57 | 4.7 | 95.3 | 0.0 | -0.16 | 0.64 | 0.29 | — | 6.8 | 0.002 | 0.50 | 0.0 | 0.04 | 13.89 | 0.00 | 1.956 | 14.79 | 1.75 | 6.1 | 93.9 | 0.0 | -0.54 | 0.42 | 0.82 | 0.72 | — | 9997 | 637 | 14 | 0 | 0 | 23 | 4901 | logfile |