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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 6HD7 | 0202 | 2022-04-09 | 2018-08-17 | 3.4 | 3.54 | — | 3.3 | 0.002 | 0.43 | 0.0 | 0.03 | 14.93 | 0.00 | 0.345 | 24.95 | 0.08 | 11.1 | 87.1 | 1.9 | -3.26 | 0.66 | 0.65 | 0.74 | 3.3 | 0.007 | 0.79 | 0.0 | 0.04 | 17.84 | 0.01 | 1.953 | 18.74 | 0.71 | 7.3 | 92.3 | 0.4 | -1.37 | 1.56 | 0.76 | 0.87 | 1.70 | 141153 | 7514 | 52 | 3767 | 234 | 0 | 0 | logfile |
✔ | 3J9W | 6306 | 2022-04-08 | 2015-03-16 | 3.9 | 3.93 | — | 3.8 | 0.010 | 1.50 | 0.0 | 0.03 | 15.63 | 0.02 | 1.433 | 8.85 | 0.26 | 6.0 | 92.0 | 2.0 | -1.66 | 0.74 | 0.72 | 0.72 | 3.8 | 0.005 | 0.78 | 0.0 | 0.04 | 17.69 | 0.01 | 2.004 | 20.54 | 1.64 | 8.4 | 91.0 | 0.6 | -0.70 | 1.35 | 0.80 | 0.85 | 1.39 | 135425 | 5661 | 54 | 4675 | 0 | 0 | 0 | logfile |
✔ | 7QV2 | 14158 | 2022-04-09 | 2022-01-19 | 3.5 | 3.59 | — | 3.2 | 0.002 | 0.48 | 0.0 | 0.03 | 15.58 | 0.00 | 1.833 | 5.98 | 0.25 | 4.7 | 95.2 | 0.1 | -1.90 | 0.77 | 0.82 | 1.24 | 3.2 | 0.005 | 0.71 | 0.0 | 0.04 | 16.91 | 0.01 | 1.986 | 17.12 | 1.00 | 7.9 | 92.0 | 0.1 | -1.33 | 3.66 | 0.78 | 0.86 | 1.22 | 142856 | 5268 | 53 | 4726 | 24 | 0 | 0 | logfile |
✔ | 7oLC | 12976 | 2022-04-17 | 2021-05-19 | 2.9 | 3.43 | — | 3.2 | 0.003 | 0.45 | 0.0 | 0.03 | 14.06 | 0.01 | 1.848 | 4.35 | 0.04 | 4.4 | 95.6 | 0.0 | -1.10 | 0.78 | 0.86 | 3.30 | 3.2 | 0.006 | 0.65 | 0.0 | 0.04 | 15.41 | 0.01 | 1.691 | 6.73 | 2.43 | 5.5 | 94.5 | 0.0 | -0.70 | 0.32 | 0.81 | 0.88 | 2.82 | 207344 | 11862 | 127 | 5231 | 579 | 945 | 0 | logfile |
✔ | 7R81 | 24307 | 2022-04-16 | 2021-06-25 | 2.7 | 3.15 | 2.85 | 3.1 | 0.003 | 0.52 | 0.0 | 0.03 | 14.47 | 0.00 | 1.908 | 7.78 | 0.02 | 4.4 | 95.5 | 0.1 | -0.20 | 0.78 | 0.84 | 3.14 | 3.1 | 0.007 | 0.68 | 0.0 | 0.04 | 15.69 | 0.01 | 1.757 | 8.63 | 1.99 | 4.9 | 95.0 | 0.1 | 0.20 | 1.10 | 0.74 | 0.83 | 2.76 | 202730 | 11133 | 91 | 5339 | 266 | 0 | 0 | logfile |
✘ | 7PiM | 13442 | 2022-04-05 | 2021-08-20 | 4.6 | 5.02 | 5.18 | 4.6 | 0.002 | 0.41 | 0.0 | 0.03 | 8.31 | 0.00 | 1.900 | 45.46 | 0.67 | 2.0 | 98.0 | 0.0 | 2.23 | 0.81 | 0.76 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 11844 | 1412 | 12 | 0 | 8 | 0 | 524 | logfile |
✔ | 7S1G | 24800 | 2022-04-26 | 2021-09-02 | 2.48 | 3.04 | — | 2.9 | 0.004 | 0.38 | 0.0 | 0.03 | 14.28 | 0.01 | 1.320 | 3.75 | 0.80 | 2.4 | 97.6 | 0.1 | 1.41 | 0.75 | 0.86 | 3.21 | 2.9 | 0.003 | 0.57 | 0.0 | 0.03 | 15.33 | 0.01 | 1.808 | 5.74 | 2.12 | 3.5 | 96.5 | 0.1 | 0.64 | 0.89 | 0.76 | 0.88 | 3.18 | 240537 | 5661 | 66 | 4638 | 199 | 42 | 96399 | logfile |
✔ | 7PGS | 13394 | 2022-04-06 | 2021-08-15 | 3.4 | 3.61 | 3.34 | 3.4 | 0.002 | 0.40 | 0.0 | 0.03 | 10.77 | 0.00 | 1.972 | 3.57 | 0.66 | 1.2 | 98.8 | 0.0 | -0.33 | 0.80 | 0.79 | 2.03 | 3.4 | 0.004 | 0.57 | 0.0 | 0.04 | 13.25 | 0.00 | 1.886 | 6.31 | 0.16 | 4.0 | 95.9 | 0.0 | 1.36 | 0.74 | 0.82 | 0.81 | 1.49 | 67202 | 4210 | 2 | 0 | 1 | 0 | 33807 | logfile |
✔ | 7LS2 | 23501 | 2022-04-24 | 2021-02-17 | 3.1 | 3.64 | 3.30 | 3.5 | 0.006 | 0.56 | 0.0 | 0.03 | 13.86 | 0.02 | 1.971 | 7.70 | 1.16 | 2.6 | 97.3 | 0.0 | 0.82 | 0.74 | 0.84 | 1.94 | 3.4 | 0.007 | 0.85 | 0.0 | 0.04 | 16.84 | 0.01 | 1.801 | 20.93 | 1.37 | 5.0 | 95.0 | 0.0 | -0.55 | 1.28 | 0.76 | 0.87 | 1.75 | 227130 | 12862 | 96 | 5782 | 8 | 4 | 0 | logfile |
✔ | 7S1H | 24801 | 2022-04-26 | 2021-09-02 | 2.35 | 3.01 | — | 2.9 | 0.004 | 0.40 | 0.0 | 0.03 | 14.30 | 0.01 | 1.638 | 3.98 | 0.99 | 2.3 | 97.6 | 0.1 | 1.27 | 0.73 | 0.86 | 3.34 | 2.9 | 0.005 | 0.58 | 0.0 | 0.04 | 15.19 | 0.01 | 1.753 | 5.85 | 2.49 | 3.6 | 96.3 | 0.1 | 0.56 | 0.40 | 0.74 | 0.87 | 3.47 | 237870 | 5656 | 63 | 4556 | 209 | 37 | 95478 | logfile |
✔ | 7FHL | 31586 | 2022-04-05 | 2021-07-29 | 3.1 | 3.71 | — | 3.6 | 0.002 | 0.55 | 0.0 | 0.03 | 12.50 | 0.00 | 2.150 | 6.83 | 0.00 | 1.2 | 98.8 | 0.0 | 1.13 | 0.70 | 0.81 | 1.99 | 3.6 | 0.003 | 0.58 | 0.0 | 0.04 | 14.73 | 0.00 | 2.130 | 8.74 | 0.34 | 2.1 | 97.9 | 0.0 | 2.16 | 0.46 | 0.70 | 0.83 | 1.72 | 11058 | 1326 | 6 | 0 | 28 | 0 | 0 | logfile |
✔ | 7oHW | 12911 | 2022-04-11 | 2021-05-11 | 3.5 | 4.33 | 3.60 | 3.3 | 0.002 | 0.44 | 0.0 | 0.03 | 15.80 | 0.00 | 1.811 | 5.00 | 0.66 | 3.9 | 96.0 | 0.1 | 1.91 | 0.81 | 0.75 | 1.34 | 3.3 | 0.008 | 0.65 | 0.0 | 0.04 | 16.78 | 0.00 | 1.870 | 13.12 | 0.34 | 6.4 | 93.6 | 0.0 | -0.09 | 0.88 | 0.82 | 0.81 | 1.53 | 171568 | 6824 | 41 | 1853 | 1 | 0 | 76920 | logfile |
✔ | 7oBR | 12801 | 2022-04-11 | 2021-04-23 | 2.8 | 2.88 | — | 2.9 | 0.002 | 0.49 | 1.0 | 0.03 | 15.19 | 0.00 | 1.835 | 8.02 | 2.55 | 4.6 | 95.3 | 0.0 | 0.58 | 0.61 | 0.80 | 2.85 | 2.8 | 0.006 | 0.71 | 0.0 | 0.04 | 17.24 | 0.01 | 1.825 | 9.62 | 3.50 | 5.8 | 94.1 | 0.1 | -0.01 | 1.18 | 0.63 | 0.83 | 3.05 | 146701 | 7484 | 60 | 4019 | 102 | 0 | 0 | logfile |
✔ | 6XKY | 22229 | 2022-04-08 | 2020-06-27 | 3.2 | 3.13 | 3.17 | 3.2 | 0.006 | 0.55 | 0.0 | 0.03 | 10.04 | 0.00 | 1.588 | 4.66 | 0.48 | 1.5 | 98.5 | 0.0 | 2.67 | 0.52 | 0.87 | 2.05 | 3.2 | 0.004 | 0.49 | 0.0 | 0.03 | 14.28 | 0.00 | 2.145 | 4.55 | 0.33 | 1.9 | 98.1 | 0.0 | 3.67 | 0.50 | 0.53 | 0.89 | 1.91 | 38760 | 5420 | 20 | 0 | 0 | 0 | 0 | logfile |
✔ | 7oHV | 12910 | 2022-04-16 | 2021-05-11 | 3.9 | 4.64 | 4.01 | 3.5 | 0.002 | 0.44 | 0.0 | 0.03 | 15.77 | 0.00 | 1.754 | 5.23 | 1.39 | 3.1 | 96.8 | 0.0 | 1.66 | 0.77 | 0.67 | 0.89 | 3.6 | 0.005 | 0.57 | 0.0 | 0.04 | 16.89 | 0.00 | 1.836 | 14.05 | 0.28 | 6.3 | 93.7 | 0.0 | 0.01 | 2.03 | 0.82 | 0.79 | 0.94 | 205079 | 7892 | 47 | 2361 | 1 | 0 | 91259 | logfile |
✔ | 7oHS | 12907 | 2022-04-12 | 2021-05-11 | 4.38 | 5.02 | 4.50 | 3.0 | 0.002 | 0.43 | 0.0 | 0.03 | 16.21 | 0.00 | 1.856 | 5.71 | 0.76 | 4.0 | 96.0 | 0.0 | 1.20 | 0.77 | 0.69 | — | 3.1 | 0.006 | 0.62 | 0.0 | 0.04 | 16.74 | 0.00 | 1.744 | 16.94 | 0.00 | 7.5 | 92.5 | 0.0 | -0.74 | 1.43 | 0.80 | 0.78 | — | 175937 | 6971 | 42 | 1909 | 2 | 0 | 78846 | logfile |
✔ | 7Sii | 25142 | 2022-04-06 | 2021-10-14 | 3.45 | 3.63 | — | 3.6 | 0.007 | 0.91 | 0.0 | 0.03 | 13.16 | 0.00 | 2.220 | 5.25 | 2.21 | 2.9 | 97.1 | 0.0 | 2.94 | 0.64 | 0.79 | 2.61 | 3.6 | 0.005 | 0.56 | 0.0 | 0.04 | 15.27 | 0.00 | 2.069 | 7.24 | 0.28 | 3.7 | 96.3 | 0.0 | 2.49 | 0.52 | 0.65 | 0.82 | 1.84 | 20484 | 1286 | 8 | 0 | 4 | 0 | 10184 | logfile |
✔ | 7P1J | 13162 | 2022-04-04 | 2021-07-01 | 3.04 | 4.02 | 2.96 | 4.0 | 0.002 | 0.48 | 0.0 | 0.03 | 8.89 | 0.00 | 2.305 | 5.96 | 2.29 | 3.5 | 96.5 | 0.0 | 2.14 | 0.65 | 0.71 | 0.64 | 4.0 | 0.013 | 1.57 | 0.0 | 0.05 | 14.60 | 0.00 | 2.181 | 23.02 | 0.57 | 6.0 | 94.0 | 0.0 | 0.85 | 1.42 | 0.66 | 0.73 | 0.37 | 6502 | 868 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 7oBQ | 12799 | 2022-04-05 | 2021-04-23 | 3.9 | 4.22 | — | 3.9 | 0.003 | 0.48 | 0.0 | 0.03 | 12.88 | 0.00 | 2.106 | 9.19 | 2.63 | 2.7 | 97.3 | 0.0 | 1.55 | 0.76 | 0.79 | 0.82 | 3.9 | 0.011 | 1.11 | 0.0 | 0.04 | 15.51 | 0.00 | 1.846 | 21.25 | 0.37 | 4.1 | 95.9 | 0.0 | 0.39 | 1.25 | 0.77 | 0.81 | 0.90 | 16668 | 1642 | 11 | 165 | 39 | 0 | 0 | logfile |
✔ | 7oHR | 12906 | 2022-04-26 | 2021-05-11 | 4.72 | 4.88 | 4.81 | 2.8 | 0.005 | 0.46 | 2.0 | 0.03 | 16.12 | 0.00 | 1.542 | 6.12 | 0.99 | 3.0 | 96.9 | 0.0 | 1.36 | 0.76 | 0.65 | — | 2.9 | 0.004 | 0.57 | 0.0 | 0.04 | 16.40 | 0.00 | 1.522 | 15.21 | 0.00 | 6.8 | 93.2 | 0.0 | -0.26 | 1.38 | 0.81 | 0.75 | — | 235846 | 9318 | 52 | 2596 | 1 | 0 | 105613 | logfile |