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Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 3JAE | 6345 | 2023-08-12 | 2015-06-08 | 3.9 | 2.88 | — | 3.5 | 0.006 | 1.26 | 0.0 | 0.05 | 9.27 | 0.01 | 2.202 | 13.69 | 0.00 | 0.9 | 99.1 | 0.0 | -1.69 | 0.70 | 0.74 | 1.87 | 3.2 | 0.003 | 0.87 | 0.0 | 0.04 | 13.61 | 0.00 | 2.157 | 15.62 | 0.16 | 2.8 | 97.2 | 0.0 | 0.08 | 1.49 | 0.72 | 0.82 | 1.59 | 12825 | 1690 | 10 | 0 | 10 | 0 | 0 | logfile |
✔ | 3JAD | 6344 | 2023-08-12 | 2015-06-08 | 3.9 | 2.16 | — | 3.8 | 0.008 | 1.33 | 0.0 | 0.06 | 8.45 | 0.00 | 2.250 | 16.87 | 0.43 | 2.7 | 97.3 | 0.0 | -2.13 | 0.68 | 0.72 | 0.33 | 3.0 | 0.003 | 0.76 | 0.0 | 0.04 | 12.95 | 0.00 | 2.195 | 16.00 | 0.17 | 4.0 | 96.0 | 0.0 | 0.22 | 1.23 | 0.70 | 0.77 | 0.37 | 12705 | 1685 | 15 | 0 | 15 | 0 | 0 | logfile |
✘ | 3JAF | 6346 | 2023-08-13 | 2015-06-08 | 3.8 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 13865 | 1710 | 15 | 0 | 15 | 0 | 0 | logfile |
✔ | 3JAL | 6350 | 2023-08-25 | 2015-06-16 | 3.5 | 3.70 | — | 3.6 | 0.009 | 1.46 | 5.0 | 0.08 | 15.76 | 0.01 | 1.948 | 1.62 | 1.21 | 2.9 | 97.0 | 0.1 | 0.16 | 0.68 | 0.86 | 2.81 | 3.6 | 0.004 | 0.64 | 0.0 | 0.04 | 16.98 | 0.00 | 1.891 | 7.21 | 0.15 | 2.4 | 97.6 | 0.0 | 0.73 | 0.79 | 0.66 | 0.87 | 2.62 | 43012 | 5428 | 26 | 0 | 18 | 0 | 0 | logfile |
✔ | 3JAK | 6349 | 2023-08-25 | 2015-06-16 | 3.3 | 3.49 | — | 3.6 | 0.009 | 1.40 | 0.0 | 0.08 | 15.62 | 0.01 | 2.010 | 2.26 | 1.12 | 2.2 | 97.7 | 0.1 | 0.27 | 0.64 | 0.85 | 2.90 | 3.5 | 0.003 | 0.58 | 0.0 | 0.04 | 16.58 | 0.00 | 1.953 | 6.16 | 0.37 | 1.9 | 98.1 | 0.0 | 1.18 | 0.73 | 0.61 | 0.87 | 2.60 | 43066 | 5428 | 26 | 0 | 18 | 0 | 0 | logfile |
✔ | 3JAM | 3047 | 2023-08-19 | 2015-06-17 | 3.46 | 3.54 | 3.52 | 3.5 | 0.007 | 1.32 | 63.0 | 0.10 | 21.31 | 0.01 | 1.398 | 7.14 | 13.45 | 10.2 | 86.0 | 3.8 | -1.98 | 0.64 | 0.83 | 1.53 | 3.5 | 0.003 | 0.71 | 0.0 | 0.04 | 19.38 | 0.01 | 1.893 | 13.10 | 0.65 | 9.1 | 89.8 | 1.1 | -1.00 | 0.73 | 0.67 | 0.86 | 1.61 | 77850 | 5056 | 42 | 1780 | 83 | 0 | 0 | logfile |
✔ | 3JAP | 3048 | 2023-08-24 | 2015-06-18 | 4.9 | 5.03 | 5.08 | 5.0 | 0.007 | 1.39 | 79.0 | 0.11 | 22.42 | 0.01 | 1.307 | 9.48 | 13.17 | 10.9 | 85.8 | 3.4 | -1.68 | 0.68 | 0.69 | — | 4.9 | 0.004 | 0.77 | 0.0 | 0.04 | 18.91 | 0.01 | 1.237 | 23.76 | 0.03 | 10.5 | 88.7 | 0.8 | -1.59 | 2.18 | 0.71 | 0.80 | — | 98333 | 7272 | 53 | 1869 | 255 | 0 | 0 | logfile |
✔ | 3JAR | 6351 | 2023-08-25 | 2015-06-19 | 3.4 | 3.64 | — | 3.6 | 0.008 | 1.38 | 6.0 | 0.08 | 16.19 | 0.01 | 1.923 | 1.68 | 1.82 | 2.6 | 97.2 | 0.2 | 0.27 | 0.69 | 0.87 | 3.14 | 3.6 | 0.003 | 0.60 | 0.0 | 0.04 | 16.70 | 0.00 | 1.918 | 6.70 | 0.22 | 2.2 | 97.8 | 0.0 | 1.17 | 1.52 | 0.66 | 0.87 | 2.71 | 43024 | 5428 | 26 | 6 | 12 | 0 | 0 | logfile |
✔ | 3JAS | 6353 | 2023-08-25 | 2015-06-19 | 3.5 | 3.68 | — | 3.7 | 0.008 | 1.46 | 6.0 | 0.08 | 16.41 | 0.01 | 1.846 | 3.37 | 2.07 | 3.1 | 96.8 | 0.1 | 0.41 | 0.64 | 0.85 | 2.90 | 3.6 | 0.003 | 0.64 | 0.0 | 0.04 | 17.08 | 0.00 | 1.917 | 8.59 | 0.25 | 2.6 | 97.4 | 0.0 | 1.53 | 0.78 | 0.60 | 0.84 | 2.23 | 40506 | 5124 | 24 | 6 | 12 | 0 | 0 | logfile |
✔ | 3JAT | 6352 | 2023-08-25 | 2015-06-20 | 3.5 | 3.68 | — | 3.7 | 0.009 | 1.54 | 12.0 | 0.09 | 16.21 | 0.01 | 1.855 | 1.71 | 0.55 | 3.1 | 96.8 | 0.1 | 0.14 | 0.64 | 0.82 | 2.93 | 3.7 | 0.003 | 0.61 | 0.0 | 0.04 | 17.20 | 0.00 | 1.911 | 7.91 | 0.21 | 2.2 | 97.8 | 0.0 | 1.05 | 0.78 | 0.62 | 0.84 | 2.24 | 40500 | 5124 | 24 | 0 | 24 | 0 | 0 | logfile |
✔ | 3JAU | 6366 | 2023-08-12 | 2015-06-24 | 4.8 | 4.76 | — | 6.0 | 0.027 | 2.66 | 660.0 | 0.16 | 14.74 | 0.02 | 1.686 | 10.72 | 1.90 | 4.6 | 94.1 | 1.3 | -2.16 | 0.21 | 0.38 | — | 5.4 | 0.003 | 0.70 | 0.0 | 0.04 | 13.62 | 0.00 | 2.034 | 12.63 | 0.00 | 4.6 | 95.0 | 0.4 | -1.07 | 1.45 | 0.24 | 0.57 | — | 114900 | 14700 | 180 | 0 | 0 | 0 | 0 | logfile |
✔ | 5A63 | 3061 | 2023-08-11 | 2015-06-24 | 3.4 | 3.50 | 3.42 | 3.5 | 0.010 | 1.69 | 8.0 | 0.11 | 19.07 | 0.01 | 2.079 | 39.51 | 13.74 | 6.4 | 91.5 | 2.1 | -0.17 | 0.36 | 0.40 | 2.09 | 3.5 | 0.003 | 0.76 | 0.0 | 0.04 | 17.76 | 0.00 | 2.217 | 12.14 | 1.05 | 5.5 | 94.1 | 0.3 | 0.06 | 3.24 | 0.62 | 0.82 | 1.80 | 10003 | 1223 | 13 | 0 | 22 | 0 | 0 | logfile |
✔ | 5A6E | 3062 | 2023-08-12 | 2015-06-25 | 4.5 | 6.76 | — | 5.1 | 0.010 | 3.73 | 0.0 | 0.05 | 15.55 | 0.01 | 2.112 | 8.77 | 3.19 | 11.1 | 88.8 | 0.2 | -5.00 | 0.36 | 0.56 | — | 4.8 | 0.004 | 0.60 | 0.0 | 0.03 | 10.41 | 0.00 | 2.080 | 11.78 | 0.00 | 5.3 | 94.7 | 0.0 | -0.72 | 1.45 | 0.40 | 0.73 | — | 11093 | 634 | 4 | 0 | 182 | 0 | 5102 | logfile |
✔ | 5A6F | 3063 | 2023-08-11 | 2015-06-25 | 4.2 | 5.75 | — | 5.0 | 0.012 | 1.50 | 0.0 | 0.05 | 12.32 | 0.01 | 2.112 | 10.08 | 3.74 | 12.2 | 87.6 | 0.2 | -4.94 | 0.56 | 0.74 | — | 4.9 | 0.002 | 0.56 | 0.0 | 0.04 | 10.89 | 0.00 | 2.048 | 8.96 | 0.00 | 4.7 | 95.3 | 0.0 | -0.78 | 0.97 | 0.57 | 0.75 | — | 8881 | 540 | 2 | 0 | 43 | 0 | 4330 | logfile |
✘ | 5A7U | 3079 | 2023-08-09 | 2015-07-10 | 4.8 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 455 | 27 | 1 | 0 | 1 | 0 | 231 | logfile |
✔ | 5A8L | 3099 | 2023-08-12 | 2015-07-16 | 3.8 | 3.60 | — | 3.5 | 0.004 | 0.67 | 0.0 | 0.02 | 12.36 | 0.00 | 1.435 | 8.96 | 0.95 | 10.3 | 86.8 | 2.9 | -2.06 | 0.18 | 0.43 | 0.47 | 3.5 | 0.005 | 0.82 | 0.0 | 0.04 | 17.26 | 0.01 | 2.034 | 19.30 | 1.33 | 10.7 | 88.1 | 1.1 | -2.35 | 1.54 | 0.23 | 0.63 | 0.72 | 12264 | 624 | 9 | 347 | 0 | 0 | 0 | logfile |
✔ | 3JB6 | 6408 | 2023-08-13 | 2015-08-02 | 3.3 | 3.35 | — | 3.4 | 0.010 | 0.90 | 4.0 | 0.06 | 9.55 | 0.01 | 2.123 | 8.29 | 0.20 | 2.4 | 97.4 | 0.1 | -3.72 | 0.63 | 0.90 | 5.02 | 3.4 | 0.002 | 0.58 | 0.0 | 0.04 | 15.12 | 0.00 | 2.150 | 6.05 | 0.13 | 1.9 | 98.1 | 0.0 | 0.06 | 1.20 | 0.62 | 0.88 | 3.70 | 13904 | 1731 | 6 | 0 | 2 | 0 | 0 | logfile |
✔ | 3JB7 | 6404 | 2023-08-13 | 2015-08-03 | 4.0 | 4.13 | — | 4.1 | 0.007 | 0.76 | 3.0 | 0.05 | 10.78 | 0.00 | 0.793 | 10.58 | 1.13 | 3.9 | 95.9 | 0.2 | -2.17 | 0.76 | 0.85 | — | 4.1 | 0.003 | 0.69 | 0.0 | 0.04 | 15.29 | 0.00 | 2.179 | 11.30 | 0.53 | 2.7 | 97.2 | 0.1 | 0.16 | 0.89 | 0.78 | 0.85 | — | 14176 | 1733 | 8 | 11 | 3 | 0 | 0 | logfile |
✘ | 3JB9 | 6413 | 2023-08-21 | 2015-08-09 | 3.6 | 3.70 | — | 3.6 | 0.010 | 1.29 | 13.0 | 0.07 | 16.84 | 0.01 | 1.253 | 18.05 | 8.06 | 9.1 | 87.9 | 3.0 | -3.97 | 0.52 | 0.51 | 1.26 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 86551 | 9194 | 50 | 328 | 1328 | 0 | 0 | logfile |
✔ | 5ADY | 3133 | 2023-08-24 | 2015-08-25 | 4.5 | 4.75 | — | 4.5 | 0.011 | 1.28 | 0.0 | 0.06 | 18.75 | 0.01 | 1.391 | 57.89 | 0.21 | 11.7 | 81.7 | 6.7 | -3.35 | 0.72 | 0.63 | — | 4.5 | 0.004 | 0.72 | 0.0 | 0.04 | 17.25 | 0.01 | 1.860 | 27.36 | 0.00 | 12.1 | 86.9 | 1.0 | -2.95 | 1.11 | 0.87 | 0.84 | — | 97364 | 4197 | 35 | 3020 | 2 | 0 | 0 | logfile |