The table shows a selection of parameters. Activate more columns using
the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 7RFP | 24444 | 2022-04-04 | 2021-07-14 | 4.4 | 4.57 | — | 4.3 | 0.014 | 2.06 | 8.0 | 0.12 | 7.12 | 0.01 | 1.581 | 3.60 | 8.00 | 9.5 | 87.5 | 3.0 | -1.46 | 0.68 | 0.61 | — | 4.3 | 0.004 | 0.91 | 0.0 | 0.04 | 6.89 | 0.00 | 2.185 | 8.70 | 0.00 | 15.2 | 84.3 | 0.5 | -4.03 | 1.49 | 0.80 | 0.75 | — | 5532 | 1114 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 6KS8 | 0760 | 2022-04-05 | 2019-08-23 | 4.69 | 4.76 | — | 4.6 | 0.001 | 0.39 | 0.0 | 0.04 | 7.12 | 0.00 | 2.228 | 5.85 | 0.01 | 4.4 | 95.5 | 0.0 | -3.61 | 0.77 | 0.67 | — | 4.6 | 0.003 | 0.69 | 0.0 | 0.04 | 11.61 | 0.00 | 2.100 | 15.56 | 0.01 | 3.0 | 97.0 | 0.0 | -0.13 | 1.85 | 0.80 | 0.71 | — | 61943 | 8120 | 16 | 0 | 0 | 0 | 0 | logfile |
✔ | 6J2X | 9772 | 2022-04-04 | 2019-01-03 | 3.8 | 3.99 | — | 3.9 | 0.002 | 0.40 | 0.0 | 0.04 | 7.12 | 0.00 | 2.220 | 6.62 | 0.00 | 5.8 | 94.1 | 0.1 | -3.52 | 0.80 | 0.70 | 0.49 | 3.9 | 0.005 | 0.82 | 1.0 | 0.05 | 15.39 | 0.01 | 2.081 | 20.71 | 0.70 | 5.3 | 94.6 | 0.1 | -0.82 | 1.89 | 0.84 | 0.78 | 0.91 | 106176 | 13501 | 47 | 0 | 0 | 0 | 0 | logfile |
✔ | 6KRD | 0756 | 2022-04-05 | 2019-08-21 | 4.38 | 4.25 | — | 4.4 | 0.001 | 0.39 | 0.0 | 0.04 | 7.15 | 0.00 | 2.226 | 5.80 | 0.00 | 4.5 | 95.5 | 0.1 | -3.58 | 0.57 | 0.52 | — | 4.3 | 0.008 | 0.86 | 1.0 | 0.05 | 11.99 | 0.00 | 1.822 | 15.45 | 0.01 | 3.3 | 96.6 | 0.1 | -0.02 | 1.78 | 0.63 | 0.59 | — | 61005 | 8006 | 16 | 0 | 0 | 0 | 0 | logfile |
✔ | 7VXA | 32173 | 2022-04-09 | 2021-11-12 | 3.9 | 4.16 | — | 4.1 | 0.002 | 0.41 | 0.0 | 0.04 | 7.17 | 0.00 | 2.017 | 12.91 | 0.00 | 4.3 | 95.7 | 0.0 | -1.90 | 0.60 | 0.60 | 0.95 | 4.0 | 0.005 | 0.74 | 0.0 | 0.04 | 13.79 | 0.00 | 1.906 | 33.99 | 0.15 | 4.8 | 95.2 | 0.1 | -0.61 | 1.69 | 0.65 | 0.72 | 1.08 | 46176 | 3795 | 4 | 0 | 0 | 0 | 16288 | logfile |
✔ | 6J2Q | 9771 | 2022-04-04 | 2019-01-02 | 3.8 | 3.95 | — | 3.9 | 0.002 | 0.40 | 0.0 | 0.04 | 7.17 | 0.00 | 2.202 | 6.56 | 0.00 | 5.5 | 94.4 | 0.1 | -3.50 | 0.77 | 0.68 | 0.88 | 3.9 | 0.004 | 0.80 | 0.0 | 0.04 | 15.39 | 0.00 | 2.012 | 16.20 | 0.52 | 3.9 | 95.9 | 0.1 | -0.67 | 2.27 | 0.82 | 0.76 | 1.04 | 106311 | 13518 | 47 | 0 | 0 | 0 | 0 | logfile |
✔ | 7WK3 | 32557 | 2022-04-07 | 2022-01-08 | 3.4 | 2.86 | — | 3.4 | 0.004 | 0.56 | 0.0 | 0.04 | 7.18 | 0.00 | 1.998 | 3.79 | 0.00 | 3.6 | 96.3 | 0.0 | -2.17 | 0.65 | 0.57 | 1.77 | 3.3 | 0.004 | 0.71 | 0.0 | 0.04 | 14.43 | 0.00 | 2.154 | 10.51 | 0.36 | 2.9 | 97.1 | 0.0 | -0.15 | 1.12 | 0.79 | 0.79 | 1.85 | 24805 | 3162 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 7JG8 | 22314 | 2022-04-06 | 2020-07-18 | 3.3 | 2.35 | 3.38 | 3.3 | 0.009 | 1.50 | 0.0 | 0.20 | 7.20 | 0.01 | 2.424 | 0.51 | 0.00 | 3.2 | 96.6 | 0.2 | -1.30 | 0.62 | 0.55 | — | 3.4 | 0.002 | 0.82 | 0.0 | 0.08 | 5.33 | 0.00 | 2.297 | 1.62 | 0.00 | 7.7 | 92.2 | 0.1 | -1.26 | 1.28 | 0.72 | 0.70 | — | 19573 | 4827 | 26 | 0 | 7 | 0 | 0 | logfile |
✔ | 7VX9 | 32172 | 2022-04-09 | 2021-11-12 | 4.0 | 4.30 | — | 4.2 | 0.002 | 0.37 | 0.0 | 0.04 | 7.20 | 0.00 | 2.022 | 12.45 | 0.00 | 4.1 | 95.8 | 0.1 | -2.09 | 0.63 | 0.59 | — | 4.1 | 0.003 | 0.64 | 0.0 | 0.04 | 14.40 | 0.00 | 1.913 | 37.84 | 0.48 | 3.9 | 96.0 | 0.2 | -0.67 | 1.39 | 0.67 | 0.72 | — | 46098 | 3789 | 4 | 0 | 0 | 0 | 16250 | logfile |
✔ | 7WKA | 32564 | 2022-04-08 | 2022-01-08 | 3.64 | 3.27 | — | 3.6 | 0.002 | 0.47 | 0.0 | 0.04 | 7.20 | 0.00 | 2.171 | 7.35 | 0.11 | 4.0 | 95.9 | 0.1 | -1.95 | 0.59 | 0.46 | 0.82 | 3.8 | 0.004 | 0.79 | 0.0 | 0.05 | 13.97 | 0.01 | 2.068 | 15.37 | 0.68 | 3.4 | 96.5 | 0.1 | -0.45 | 1.57 | 0.76 | 0.72 | 1.23 | 31575 | 4041 | 7 | 0 | 0 | 0 | 0 | logfile |
✔ | 7VXB | 32174 | 2022-04-07 | 2021-11-12 | 3.9 | 4.21 | — | 4.1 | 0.002 | 0.41 | 0.0 | 0.04 | 7.20 | 0.00 | 2.045 | 12.24 | 0.00 | 4.1 | 95.8 | 0.0 | -1.93 | 0.60 | 0.62 | 0.94 | 4.1 | 0.009 | 0.97 | 1.0 | 0.04 | 14.21 | 0.01 | 2.006 | 15.01 | 0.18 | 3.7 | 96.2 | 0.1 | -0.16 | 1.15 | 0.66 | 0.75 | 1.06 | 29888 | 3795 | 4 | 0 | 0 | 0 | 0 | logfile |
✔ | 6DWB | 8924 | 2022-04-06 | 2018-06-26 | 3.3 | 3.43 | — | 3.4 | 0.007 | 0.66 | 0.0 | 0.04 | 7.21 | 0.01 | 2.161 | 2.34 | 0.00 | 5.1 | 94.9 | 0.0 | -6.22 | 0.61 | 0.75 | 2.51 | 3.4 | 0.004 | 0.53 | 0.0 | 0.04 | 13.66 | 0.00 | 2.134 | 4.08 | 0.05 | 3.8 | 96.2 | 0.0 | 4.41 | 1.14 | 0.76 | 0.91 | 3.08 | 18360 | 2340 | 30 | 0 | 0 | 0 | 0 | logfile |
✘ | 5GW4 | 9540 | 2022-04-05 | 2016-09-08 | 4.7 | 4.89 | — | 4.8 | 0.001 | 0.42 | 0.0 | 0.04 | 7.26 | 0.00 | 2.187 | 6.49 | 0.00 | 4.3 | 95.6 | 0.1 | -3.58 | 0.77 | 0.66 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 64544 | 8446 | 16 | 0 | 0 | 0 | 0 | logfile |
✔ | 7VXi | 32180 | 2022-04-07 | 2021-11-12 | 3.4 | 2.35 | — | 2.0 | 0.002 | 0.49 | 0.0 | 0.04 | 7.29 | 0.00 | 2.125 | 3.01 | 0.00 | 4.3 | 95.5 | 0.1 | -1.83 | 0.65 | 0.60 | 1.83 | 2.1 | 0.004 | 0.70 | 0.0 | 0.05 | 13.63 | 0.01 | 2.105 | 10.97 | 0.29 | 4.0 | 95.8 | 0.2 | -0.16 | 1.43 | 0.72 | 0.70 | 2.44 | 24570 | 3144 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 7WK2 | 32556 | 2022-04-07 | 2022-01-08 | 3.1 | 2.75 | — | 3.3 | 0.004 | 0.57 | 0.0 | 0.04 | 7.30 | 0.00 | 1.974 | 3.94 | 0.00 | 3.8 | 96.2 | 0.0 | -2.33 | 0.66 | 0.57 | 1.89 | 3.3 | 0.003 | 0.71 | 0.0 | 0.05 | 14.60 | 0.00 | 1.947 | 10.19 | 0.32 | 2.7 | 97.3 | 0.0 | -0.05 | 1.16 | 0.80 | 0.79 | 2.05 | 24879 | 3171 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 3JCZ | 6630 | 2022-04-06 | 2016-03-27 | 3.26 | 3.11 | — | 3.3 | 0.008 | 0.69 | 0.0 | 0.05 | 7.32 | 0.01 | 2.244 | 8.63 | 0.00 | 7.0 | 93.0 | 0.0 | -4.42 | 0.77 | 0.85 | 4.34 | 3.3 | 0.004 | 0.66 | 0.0 | 0.04 | 13.91 | 0.00 | 2.084 | 10.87 | 0.28 | 5.3 | 94.7 | 0.0 | -0.61 | 2.04 | 0.78 | 0.87 | 2.39 | 23286 | 2976 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 6J30 | 9773 | 2022-04-04 | 2019-01-03 | 4.5 | 4.74 | — | 4.6 | 0.002 | 0.44 | 0.0 | 0.04 | 7.35 | 0.00 | 2.093 | 8.56 | 0.07 | 6.4 | 93.4 | 0.3 | -3.38 | 0.86 | 0.72 | — | 4.5 | 0.003 | 0.73 | 0.0 | 0.04 | 12.16 | 0.00 | 2.060 | 19.34 | 0.00 | 5.3 | 94.5 | 0.2 | -0.65 | 1.90 | 0.89 | 0.77 | — | 106227 | 13504 | 47 | 0 | 0 | 0 | 0 | logfile |
✔ | 7WD9 | 32435 | 2022-04-06 | 2021-12-21 | 3.7 | 4.02 | — | 3.8 | 0.003 | 0.45 | 0.0 | 0.04 | 7.35 | 0.00 | 1.967 | 2.73 | 0.00 | 4.2 | 95.6 | 0.1 | -1.79 | 0.57 | 0.42 | 0.74 | 3.8 | 0.005 | 0.80 | 1.0 | 0.04 | 13.65 | 0.00 | 1.834 | 13.06 | 0.15 | 6.0 | 93.9 | 0.1 | -1.01 | 1.31 | 0.75 | 0.69 | 1.08 | 69720 | 4533 | 9 | 0 | 0 | 0 | 34404 | logfile |
✔ | 6DSo | 8910 | 2022-04-04 | 2018-06-14 | 3.0 | 3.30 | 2.98 | 3.4 | 0.009 | 0.94 | 0.0 | 0.06 | 7.35 | 0.00 | 2.431 | 1.53 | 0.00 | 3.2 | 96.8 | 0.0 | -4.46 | 0.49 | 0.81 | 6.10 | 3.3 | 0.006 | 0.73 | 0.0 | 0.05 | 15.53 | 0.00 | 2.156 | 11.82 | 0.69 | 9.5 | 90.5 | 0.0 | -4.38 | 1.55 | 0.50 | 0.83 | 5.18 | 6588 | 828 | 12 | 0 | 0 | 0 | 0 | logfile |
✔ | 7VXE | 32177 | 2022-04-09 | 2021-11-12 | 3.2 | 2.31 | — | 2.0 | 0.003 | 0.45 | 0.0 | 0.04 | 7.36 | 0.00 | 2.082 | 1.83 | 0.00 | 4.4 | 95.5 | 0.1 | -1.79 | 0.61 | 0.54 | 2.41 | 2.1 | 0.003 | 0.58 | 0.0 | 0.04 | 12.72 | 0.00 | 1.935 | 4.93 | 0.22 | 3.3 | 96.6 | 0.2 | -0.03 | 1.46 | 0.70 | 0.72 | 2.67 | 49296 | 3186 | 3 | 0 | 0 | 0 | 24366 | logfile |