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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 6HD5 | 0201 | 2024-03-14 | 2018-08-17 | 4.8 | 6.01 | — | 5.9 | 0.001 | 0.40 | 0.0 | 0.03 | 8.70 | 0.00 | 2.289 | 4.36 | 0.10 | 10.5 | 88.4 | 1.1 | -1.81 | 0.36 | 0.32 | — | 5.9 | 0.004 | 0.81 | 0.0 | 0.04 | 12.06 | 0.00 | 2.092 | 22.70 | 0.00 | 6.5 | 93.4 | 0.1 | -0.69 | 2.09 | 0.46 | 0.57 | — | 9707 | 1234 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 6HD7 | 0202 | 2024-03-20 | 2018-08-17 | 3.4 | 3.54 | — | 3.3 | 0.002 | 0.43 | 0.0 | 0.03 | 22.25 | 0.00 | 0.345 | 24.96 | 0.08 | 11.1 | 87.1 | 1.9 | -3.26 | 0.66 | 0.65 | 0.74 | 3.3 | 0.009 | 0.85 | 0.0 | 0.05 | 23.56 | 0.01 | 1.962 | 19.94 | 4.29 | 7.8 | 91.8 | 0.4 | -1.43 | 1.91 | 0.76 | 0.88 | 1.82 | 141153 | 7514 | 52 | 3767 | 234 | 0 | 0 | logfile |
✔ | 6HDD | 0204 | 2024-03-20 | 2018-08-17 | 4.5 | 5.28 | — | 4.4 | 0.009 | 1.36 | 3.0 | 0.08 | 12.60 | 0.01 | 2.220 | 12.08 | 1.07 | 18.3 | 81.6 | 0.1 | -6.11 | 0.74 | 0.42 | — | 10.0 | 0.005 | 1.02 | 0.0 | 0.05 | 13.60 | 0.01 | 1.496 | 26.71 | 0.00 | 17.2 | 82.6 | 0.2 | -3.09 | 5.60 | 0.87 | 0.55 | — | 28154 | 3605 | 7 | 0 | 0 | 0 | 0 | logfile |
✔ | 6HE4 | 0209 | 2024-03-15 | 2018-08-20 | 4.85 | 4.88 | — | 4.8 | 0.036 | 3.65 | 111.0 | 0.21 | 19.33 | 0.03 | 1.953 | 1.83 | 3.66 | 6.4 | 89.5 | 4.1 | -2.84 | 0.55 | 0.56 | — | 4.8 | 0.004 | 0.99 | 0.0 | 0.05 | 15.13 | 0.01 | 1.872 | 28.99 | 0.00 | 8.4 | 90.9 | 0.7 | -1.36 | 1.95 | 0.58 | 0.77 | — | 12684 | 1602 | 11 | 0 | 10 | 0 | 0 | logfile |
✔ | 6HE5 | 0210 | 2024-03-19 | 2018-08-20 | 4.12 | 4.16 | — | 4.2 | 0.036 | 3.51 | 183.0 | 0.20 | 17.65 | 0.03 | 2.236 | 2.09 | 4.51 | 5.3 | 92.5 | 2.2 | -2.68 | 0.54 | 0.60 | — | 4.1 | 0.004 | 0.84 | 0.0 | 0.05 | 14.32 | 0.00 | 2.051 | 21.40 | 0.04 | 4.0 | 95.8 | 0.2 | -0.60 | 1.74 | 0.57 | 0.75 | — | 24633 | 3162 | 20 | 0 | 0 | 0 | 0 | logfile |
✔ | 6HE7 | 0211 | 2024-03-19 | 2018-08-20 | 3.69 | 3.80 | — | 3.8 | 0.039 | 3.60 | 213.0 | 0.21 | 17.65 | 0.03 | 2.081 | 3.03 | 4.93 | 5.6 | 92.9 | 1.6 | -2.44 | 0.64 | 0.70 | 2.28 | 3.8 | 0.012 | 0.75 | 0.0 | 0.05 | 17.58 | 0.00 | 1.905 | 11.54 | 3.67 | 3.4 | 96.6 | 0.0 | -0.04 | 0.90 | 0.63 | 0.78 | 1.50 | 23821 | 3059 | 14 | 0 | 0 | 0 | 0 | logfile |
✘ | 6HiN | 0225 | 2024-03-16 | 2018-08-30 | 4.1 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 14220 | 1675 | 20 | 0 | 30 | 0 | 0 | logfile |
✘ | 6Hio | 0226 | 2024-03-16 | 2018-08-30 | 4.2 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 16085 | 1925 | 20 | 0 | 30 | 0 | 0 | logfile |
✘ | 6HiQ | 0227 | 2024-03-17 | 2018-08-30 | 3.2 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 16110 | 1925 | 20 | 0 | 30 | 0 | 0 | logfile |
✔ | 6HiX | 0231 | 2024-03-17 | 2018-08-31 | 3.39 | 3.49 | 3.39 | 3.4 | 0.008 | 1.31 | 12.0 | 0.05 | 15.97 | 0.01 | 1.582 | 14.35 | 4.18 | 4.5 | 95.2 | 0.3 | -3.09 | 0.84 | 0.82 | 2.30 | 3.4 | 0.005 | 0.77 | 5.0 | 0.04 | 18.02 | 0.01 | 1.874 | 14.78 | 4.34 | 5.9 | 94.1 | 0.1 | -0.31 | 0.75 | 0.87 | 0.87 | 2.16 | 133849 | 14850 | 98 | 591 | 477 | 0 | 0 | logfile |
✔ | 6HiY | 0232 | 2024-03-21 | 2018-08-31 | 3.27 | 3.35 | 3.30 | 3.3 | 0.008 | 1.23 | 3.0 | 0.05 | 17.88 | 0.01 | 1.653 | 13.04 | 7.79 | 3.7 | 96.0 | 0.2 | -2.97 | 0.87 | 0.87 | 2.46 | 3.3 | 0.004 | 0.64 | 0.0 | 0.04 | 18.31 | 0.00 | 1.945 | 11.37 | 4.13 | 4.6 | 95.3 | 0.1 | 0.12 | 2.06 | 0.86 | 0.87 | 2.30 | 100780 | 10991 | 49 | 478 | 181 | 0 | 0 | logfile |
✔ | 6HiZ | 0233 | 2024-03-17 | 2018-08-31 | 3.08 | 3.20 | 3.05 | 3.1 | 0.009 | 1.39 | 0.0 | 0.06 | 18.47 | 0.01 | 1.866 | 11.16 | 12.80 | 3.2 | 96.7 | 0.1 | -2.90 | 0.89 | 0.91 | 2.63 | 3.1 | 0.002 | 0.56 | 0.0 | 0.04 | 17.46 | 0.00 | 1.965 | 8.07 | 2.24 | 3.3 | 96.7 | 0.0 | 1.30 | 0.76 | 0.87 | 0.90 | 2.65 | 76845 | 9056 | 33 | 143 | 19 | 3 | 0 | logfile |
✔ | 6HJN | 0234 | 2024-03-15 | 2018-09-04 | 3.3 | 3.88 | 3.28 | 3.6 | 0.008 | 1.23 | 3.0 | 0.11 | 15.25 | 0.02 | 1.734 | 5.04 | 2.80 | 8.9 | 91.1 | 0.0 | -3.22 | 0.91 | 0.91 | 4.09 | 3.6 | 0.003 | 0.68 | 0.0 | 0.04 | 13.75 | 0.00 | 2.093 | 6.28 | 1.64 | 8.3 | 91.7 | 0.0 | -0.19 | 0.55 | 0.89 | 0.89 | 3.22 | 12309 | 1488 | 24 | 0 | 48 | 0 | 0 | logfile |
✔ | 6HJP | 0235 | 2024-03-18 | 2018-09-04 | 3.3 | 3.74 | 3.29 | 3.5 | 0.008 | 1.17 | 9.0 | 0.09 | 14.76 | 0.02 | 2.158 | 3.91 | 2.40 | 7.9 | 91.9 | 0.2 | -2.34 | 0.88 | 0.90 | 3.43 | 3.5 | 0.003 | 0.65 | 0.0 | 0.04 | 13.71 | 0.00 | 2.081 | 6.40 | 2.23 | 5.0 | 95.0 | 0.0 | 0.00 | 0.61 | 0.87 | 0.89 | 2.82 | 22134 | 2784 | 30 | 0 | 51 | 0 | 0 | logfile |
✔ | 6HJQ | 0236 | 2024-03-19 | 2018-09-04 | 4.1 | 4.38 | 4.03 | 4.1 | 0.006 | 0.94 | 0.0 | 0.06 | 12.72 | 0.01 | 1.406 | 4.81 | 0.13 | 5.6 | 94.3 | 0.1 | -3.06 | 0.83 | 0.87 | — | 4.1 | 0.003 | 0.67 | 0.0 | 0.04 | 11.50 | 0.00 | 2.011 | 8.76 | 0.00 | 4.8 | 95.2 | 0.0 | -0.46 | 1.65 | 0.83 | 0.87 | — | 22530 | 2871 | 27 | 0 | 42 | 0 | 0 | logfile |
✔ | 6HJR | 0237 | 2024-03-15 | 2018-09-04 | 4.2 | 4.57 | 4.24 | 4.3 | 0.009 | 1.13 | 0.0 | 0.07 | 13.66 | 0.01 | 2.200 | 6.58 | 0.70 | 10.6 | 89.2 | 0.2 | -3.38 | 0.84 | 0.88 | — | 4.2 | 0.006 | 0.80 | 0.0 | 0.05 | 12.31 | 0.00 | 2.052 | 14.59 | 0.00 | 11.3 | 88.6 | 0.1 | -1.42 | 0.59 | 0.84 | 0.88 | — | 12579 | 1578 | 19 | 0 | 31 | 0 | 0 | logfile |
✔ | 6HKo | 0238 | 2024-03-22 | 2018-09-07 | 3.42 | 3.56 | — | 3.5 | 0.006 | 0.90 | 0.0 | 0.06 | 12.35 | 0.01 | 1.761 | 5.34 | 0.14 | 5.6 | 94.4 | 0.0 | -4.42 | 0.73 | 0.83 | 3.57 | 3.5 | 0.003 | 0.63 | 0.0 | 0.04 | 16.36 | 0.00 | 1.903 | 10.72 | 2.07 | 3.7 | 96.3 | 0.0 | -0.62 | 1.30 | 0.74 | 0.86 | 2.73 | 34518 | 4154 | 23 | 73 | 8 | 0 | 0 | logfile |
✔ | 6HLQ | 0239 | 2024-03-22 | 2018-09-11 | 3.18 | 3.18 | — | 3.2 | 0.006 | 0.90 | 0.0 | 0.06 | 12.53 | 0.01 | 1.742 | 5.18 | 0.09 | 4.6 | 95.4 | 0.0 | -4.49 | 0.68 | 0.82 | 4.22 | 3.2 | 0.004 | 0.64 | 0.0 | 0.04 | 16.70 | 0.00 | 1.940 | 8.91 | 3.63 | 3.7 | 96.3 | 0.0 | -0.81 | 0.70 | 0.69 | 0.87 | 3.53 | 32731 | 3926 | 22 | 73 | 9 | 0 | 0 | logfile |
✔ | 6HLR | 0240 | 2024-03-22 | 2018-09-11 | 3.18 | 3.30 | — | 3.3 | 0.007 | 0.95 | 0.0 | 0.06 | 12.67 | 0.01 | 1.734 | 4.72 | 0.15 | 4.9 | 95.1 | 0.0 | -4.37 | 0.70 | 0.84 | 4.14 | 3.2 | 0.003 | 0.62 | 0.0 | 0.04 | 16.44 | 0.00 | 1.974 | 8.92 | 2.88 | 3.3 | 96.7 | 0.0 | -0.16 | 1.64 | 0.72 | 0.87 | 3.07 | 32370 | 3881 | 21 | 73 | 8 | 0 | 0 | logfile |
✔ | 6HLS | 0241 | 2024-03-21 | 2018-09-11 | 3.21 | 3.27 | — | 3.3 | 0.007 | 0.94 | 0.0 | 0.06 | 10.21 | 0.01 | 2.231 | 5.15 | 0.32 | 5.4 | 94.6 | 0.0 | -4.54 | 0.64 | 0.82 | 4.01 | 3.2 | 0.006 | 0.83 | 1.0 | 0.05 | 15.23 | 0.00 | 2.017 | 10.70 | 3.63 | 5.0 | 95.0 | 0.0 | -1.22 | 1.26 | 0.67 | 0.86 | 3.06 | 30954 | 3896 | 17 | 0 | 7 | 0 | 0 | logfile |