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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 6HXX | 0297 | 2023-02-25 | 2018-10-18 | 3.4 | 3.76 | 3.51 | 3.7 | 0.008 | 1.14 | 0.0 | 0.07 | 12.31 | 0.01 | 1.586 | 8.35 | 0.28 | 8.1 | 91.9 | 0.0 | -3.79 | 0.53 | 0.84 | 2.51 | 3.7 | 0.003 | 0.69 | 0.0 | 0.04 | 16.37 | 0.00 | 2.130 | 13.65 | 0.28 | 7.4 | 92.6 | 0.0 | -0.24 | 1.27 | 0.56 | 0.86 | 2.11 | 65765 | 7840 | 70 | 175 | 0 | 0 | 0 | logfile |
✔ | 6HYD | 0308 | 2023-02-20 | 2018-10-19 | 3.9 | 4.01 | — | 4.0 | 0.004 | 0.85 | 0.0 | 0.05 | 9.33 | 0.01 | 2.319 | 2.63 | 0.24 | 5.7 | 94.0 | 0.3 | -6.69 | 0.74 | 0.77 | 2.59 | 4.0 | 0.003 | 0.66 | 0.0 | 0.04 | 14.61 | 0.00 | 2.180 | 5.80 | 0.40 | 5.3 | 94.6 | 0.1 | -1.15 | 1.75 | 0.76 | 0.79 | 1.50 | 12168 | 1543 | 1 | 0 | 31 | 0 | 0 | logfile |
✔ | 6HZ5 | 0311 | 2023-02-26 | 2018-10-22 | 4.2 | 4.28 | 4.18 | 4.3 | 0.009 | 0.97 | 0.0 | 0.05 | 14.60 | 0.01 | 1.960 | 2.94 | 0.70 | 2.7 | 97.3 | 0.0 | -0.55 | 0.79 | 0.76 | — | 4.2 | 0.003 | 0.58 | 0.0 | 0.04 | 14.66 | 0.00 | 1.803 | 11.78 | 0.05 | 4.9 | 95.1 | 0.0 | 0.00 | 1.88 | 0.81 | 0.78 | — | 67582 | 4120 | 26 | 6 | 12 | 0 | 33368 | logfile |
✔ | 6HZ6 | 0312 | 2023-02-26 | 2018-10-22 | 4.3 | 4.35 | 4.18 | 4.3 | 0.010 | 1.00 | 0.0 | 0.05 | 14.61 | 0.01 | 1.941 | 3.48 | 0.59 | 2.8 | 97.2 | 0.0 | -0.71 | 0.81 | 0.77 | — | 4.3 | 0.003 | 0.59 | 0.0 | 0.04 | 14.63 | 0.00 | 1.839 | 13.61 | 0.03 | 4.2 | 95.8 | 0.0 | -0.20 | 1.90 | 0.82 | 0.78 | — | 67582 | 4120 | 26 | 6 | 12 | 0 | 33368 | logfile |
✘ | 6HZ7 | 0313 | 2023-02-26 | 2018-10-22 | 4.3 | 4.43 | 4.32 | 4.3 | 0.008 | 0.97 | 0.0 | 0.05 | 14.60 | 0.01 | 1.959 | 2.86 | 0.59 | 2.9 | 97.1 | 0.0 | -0.47 | 0.81 | 0.76 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 67582 | 4120 | 26 | 6 | 12 | 0 | 33368 | logfile |
✔ | 6HZ8 | 0314 | 2023-02-26 | 2018-10-22 | 4.3 | 4.47 | 4.31 | 4.4 | 0.009 | 0.99 | 0.0 | 0.05 | 14.59 | 0.01 | 1.943 | 3.29 | 0.59 | 2.7 | 97.3 | 0.0 | -0.48 | 0.77 | 0.73 | — | 4.4 | 0.005 | 0.67 | 0.0 | 0.04 | 14.60 | 0.00 | 1.739 | 14.95 | 0.00 | 5.3 | 94.7 | 0.0 | -0.46 | 1.89 | 0.79 | 0.76 | — | 67582 | 4120 | 26 | 6 | 12 | 0 | 33368 | logfile |
✔ | 6HZ9 | 0315 | 2023-02-26 | 2018-10-22 | 4.8 | 4.94 | 4.76 | 4.8 | 0.009 | 1.01 | 0.0 | 0.05 | 14.59 | 0.01 | 1.957 | 3.22 | 0.51 | 2.9 | 97.1 | 0.0 | -0.60 | 0.83 | 0.76 | — | 4.8 | 0.004 | 0.62 | 0.0 | 0.04 | 14.32 | 0.00 | 1.779 | 15.48 | 0.00 | 5.2 | 94.8 | 0.0 | -0.16 | 2.82 | 0.84 | 0.78 | — | 67582 | 4120 | 26 | 6 | 12 | 0 | 33368 | logfile |
✘ | 6i00 | 0320 | 2023-02-25 | 2018-10-24 | 3.4 | 3.52 | — | 3.5 | 0.010 | 1.58 | 25.0 | 0.11 | 11.84 | 0.02 | 2.285 | 7.12 | 2.72 | 16.2 | 83.0 | 0.7 | -5.33 | 0.58 | 0.91 | 4.26 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 26712 | 3468 | 12 | 0 | 0 | 0 | 0 | logfile |
✔ | 6i1X | 0326 | 2023-02-22 | 2018-10-30 | 3.7 | 3.83 | — | 3.8 | 0.013 | 1.81 | 34.0 | 0.10 | 14.94 | 0.01 | 0.458 | 50.06 | 4.35 | 7.5 | 90.6 | 1.9 | -3.51 | 0.50 | 0.32 | 0.28 | 3.8 | 0.003 | 0.77 | 0.0 | 0.05 | 16.37 | 0.00 | 2.134 | 17.07 | 0.28 | 4.8 | 95.0 | 0.2 | -0.88 | 1.06 | 0.65 | 0.60 | 0.83 | 54915 | 7290 | 15 | 0 | 0 | 0 | 0 | logfile |
✔ | 6i1Y | 0327 | 2023-02-22 | 2018-10-30 | 3.4 | 3.52 | — | 3.4 | 0.015 | 2.01 | 16.0 | 0.10 | 13.31 | 0.02 | 1.301 | 75.50 | 0.72 | 10.9 | 85.8 | 3.3 | -5.20 | 0.79 | 0.83 | 1.55 | 3.4 | 0.004 | 0.72 | 0.0 | 0.05 | 16.10 | 0.01 | 2.139 | 15.53 | 0.48 | 6.4 | 93.3 | 0.2 | -1.66 | 1.47 | 0.77 | 0.79 | 1.57 | 56520 | 7440 | 15 | 0 | 0 | 0 | 0 | logfile |
✔ | 6i26 | 0328 | 2023-02-24 | 2018-10-31 | 4.3 | 4.37 | — | 4.2 | 0.005 | 0.89 | 0.0 | 0.05 | 8.22 | 0.01 | 0.411 | 6.12 | 0.50 | 6.4 | 93.3 | 0.3 | -6.25 | 0.75 | 0.60 | — | 4.2 | 0.002 | 0.67 | 0.0 | 0.04 | 10.47 | 0.00 | 2.212 | 4.82 | 0.00 | 5.8 | 94.2 | 0.0 | 0.06 | 0.96 | 0.83 | 0.76 | — | 22765 | 3366 | 1 | 0 | 221 | 0 | 0 | logfile |
✔ | 6i2i | 0331 | 2023-02-18 | 2018-11-01 | 3.6 | 3.72 | — | 3.7 | 0.009 | 1.17 | 0.0 | 0.06 | 12.38 | 0.01 | 2.019 | 7.46 | 0.28 | 7.1 | 92.9 | 0.0 | -5.22 | 0.74 | 0.74 | 2.16 | 3.7 | 0.004 | 0.74 | 0.0 | 0.05 | 15.73 | 0.00 | 1.880 | 15.21 | 0.69 | 5.1 | 94.9 | 0.0 | -1.91 | 0.88 | 0.76 | 0.75 | 1.76 | 6830 | 856 | 4 | 0 | 5 | 0 | 0 | logfile |
✔ | 6i2N | 0333 | 2023-02-22 | 2018-11-01 | 3.3 | 3.45 | 3.33 | 3.4 | 0.007 | 0.97 | 0.0 | 0.05 | 11.09 | 0.01 | 2.323 | 2.82 | 0.00 | 6.0 | 94.0 | 0.0 | -3.81 | 0.75 | 0.79 | 2.55 | 3.4 | 0.003 | 0.58 | 0.0 | 0.04 | 14.80 | 0.00 | 2.127 | 7.88 | 0.05 | 4.5 | 95.5 | 0.0 | 0.66 | 2.27 | 0.77 | 0.84 | 1.68 | 18970 | 2352 | 14 | 21 | 0 | 0 | 0 | logfile |
✔ | 6N3C | 0334 | 2023-02-17 | 2018-11-14 | 3.3 | 3.53 | — | 3.5 | 0.009 | 1.31 | 0.0 | 0.07 | 14.00 | 0.00 | 2.387 | 18.47 | 0.00 | 11.5 | 88.5 | 0.0 | -5.01 | 0.52 | 0.83 | 4.06 | 3.5 | 0.005 | 0.71 | 0.0 | 0.04 | 15.41 | 0.00 | 2.401 | 13.69 | 1.32 | 11.3 | 88.7 | 0.0 | -3.70 | 2.40 | 0.52 | 0.83 | 3.98 | 4260 | 640 | 20 | 0 | 0 | 0 | 0 | logfile |
✔ | 6N3Q | 0336 | 2023-02-19 | 2018-11-16 | 3.68 | 4.01 | — | 4.0 | 0.006 | 1.03 | 0.0 | 0.05 | 10.91 | 0.01 | 2.308 | 4.48 | 0.67 | 3.2 | 96.8 | 0.0 | -3.32 | 0.63 | 0.78 | 2.20 | 4.0 | 0.005 | 0.80 | 0.0 | 0.04 | 15.42 | 0.00 | 2.175 | 12.00 | 0.86 | 4.4 | 95.6 | 0.0 | 0.89 | 2.71 | 0.69 | 0.81 | 1.66 | 9931 | 1290 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 6N4B | 0339 | 2023-02-18 | 2018-11-18 | 3.0 | 3.84 | — | 3.8 | 0.011 | 1.40 | 4.0 | 0.09 | 9.55 | 0.01 | 1.855 | 20.11 | 0.84 | 2.7 | 97.3 | 0.0 | -2.27 | 0.55 | 0.81 | 3.06 | 3.8 | 0.003 | 0.66 | 0.0 | 0.04 | 15.02 | 0.00 | 2.209 | 6.16 | 2.28 | 4.1 | 95.9 | 0.0 | -0.82 | 0.67 | 0.51 | 0.79 | 2.88 | 8453 | 1121 | 6 | 0 | 3 | 0 | 0 | logfile |
✔ | 6N4Q | 0341 | 2023-02-22 | 2018-11-20 | 3.6 | 4.01 | 3.86 | 4.0 | 0.008 | 1.03 | 0.0 | 0.06 | 10.17 | 0.01 | 2.288 | 3.98 | 0.11 | 7.9 | 92.1 | 0.0 | -3.41 | 0.57 | 0.73 | 1.48 | 4.0 | 0.004 | 0.76 | 0.0 | 0.04 | 14.85 | 0.00 | 2.048 | 10.40 | 0.43 | 6.8 | 93.2 | 0.0 | -0.55 | 0.82 | 0.58 | 0.74 | 1.18 | 16358 | 2052 | 12 | 0 | 0 | 0 | 0 | logfile |
✔ | 6N4R | 0342 | 2023-02-21 | 2018-11-20 | 4.2 | 4.09 | 4.16 | 4.1 | 0.008 | 1.07 | 0.0 | 0.06 | 10.26 | 0.01 | 2.222 | 4.60 | 0.23 | 6.8 | 93.2 | 0.0 | -3.27 | 0.66 | 0.76 | — | 4.1 | 0.003 | 0.72 | 0.0 | 0.04 | 12.63 | 0.00 | 2.154 | 11.44 | 0.12 | 5.9 | 94.1 | 0.0 | -0.61 | 0.84 | 0.64 | 0.77 | — | 15444 | 1942 | 12 | 0 | 0 | 0 | 0 | logfile |
✔ | 6N51 | 0345 | 2023-02-21 | 2018-11-20 | 4.0 | 4.15 | — | 4.0 | 0.006 | 0.84 | 0.0 | 0.05 | 9.48 | 0.01 | 2.274 | 5.66 | 0.00 | 6.8 | 93.2 | 0.0 | -3.65 | 0.71 | 0.81 | — | 4.0 | 0.003 | 0.74 | 0.0 | 0.04 | 13.70 | 0.00 | 2.120 | 13.77 | 0.20 | 4.6 | 95.4 | 0.0 | -0.68 | 1.43 | 0.72 | 0.82 | — | 14087 | 1830 | 6 | 0 | 6 | 0 | 0 | logfile |
✔ | 6N52 | 0346 | 2023-02-20 | 2018-11-20 | 4.0 | 4.42 | — | 3.9 | 0.003 | 0.69 | 0.0 | 0.05 | 8.41 | 0.01 | 2.328 | 4.12 | 0.00 | 4.1 | 95.9 | 0.0 | -4.16 | 0.72 | 0.78 | — | 3.9 | 0.005 | 0.75 | 0.0 | 0.04 | 11.45 | 0.00 | 2.167 | 14.65 | 0.00 | 8.1 | 91.9 | 0.0 | -0.73 | 2.41 | 0.73 | 0.82 | — | 11108 | 1548 | 4 | 0 | 4 | 0 | 0 | logfile |