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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 6HRB | 0258 | 2023-07-05 | 2018-09-26 | 4.0 | 4.20 | 3.96 | 4.0 | 0.008 | 0.96 | 0.0 | 0.05 | 9.28 | 0.01 | 2.186 | 6.75 | 0.26 | 7.2 | 92.8 | 0.0 | -4.97 | 0.74 | 0.84 | — | 4.0 | 0.003 | 0.73 | 0.0 | 0.04 | 13.52 | 0.00 | 2.051 | 13.69 | 0.26 | 3.4 | 96.6 | 0.0 | -0.23 | 1.28 | 0.74 | 0.84 | — | 10787 | 1447 | 5 | 0 | 1 | 0 | 0 | logfile |
✔ | 6HRM | 0261 | 2023-07-19 | 2018-09-27 | 2.96 | 3.03 | — | 3.0 | 0.010 | 1.02 | 0.0 | 0.17 | 14.98 | 0.02 | 2.029 | 3.00 | 0.49 | 5.2 | 94.8 | 0.1 | -4.48 | 0.73 | 0.83 | 3.89 | 3.0 | 0.005 | 0.69 | 0.0 | 0.04 | 15.37 | 0.01 | 1.856 | 6.90 | 3.20 | 5.0 | 94.9 | 0.0 | -1.36 | 1.14 | 0.72 | 0.84 | 2.99 | 145179 | 5972 | 64 | 4570 | 438 | 2 | 0 | logfile |
✔ | 6HS7 | 0264 | 2023-07-03 | 2018-09-28 | 4.6 | 3.02 | 4.27 | 4.3 | 0.006 | 1.00 | 1.0 | 0.05 | 14.59 | 0.01 | 2.156 | 6.39 | 0.04 | 10.5 | 89.5 | 0.0 | -5.02 | 0.77 | 0.69 | — | 4.3 | 0.003 | 0.72 | 0.0 | 0.04 | 14.05 | 0.00 | 2.131 | 10.59 | 0.07 | 7.9 | 92.1 | 0.0 | -2.30 | 0.94 | 0.79 | 0.71 | — | 52890 | 6905 | 25 | 0 | 0 | 0 | 0 | logfile |
✔ | 6HTQ | 0270 | 2023-07-21 | 2018-10-04 | 4.5 | 4.18 | — | 4.1 | 0.008 | 0.89 | 0.0 | 0.04 | 17.41 | 0.01 | 2.213 | 8.09 | 0.32 | 10.3 | 89.4 | 0.3 | -4.50 | 0.83 | 0.79 | — | 4.1 | 0.004 | 0.70 | 0.0 | 0.04 | 17.81 | 0.01 | 1.973 | 21.56 | 0.06 | 11.1 | 88.8 | 0.1 | -2.67 | 0.75 | 0.83 | 0.79 | — | 146680 | 5640 | 53 | 4770 | 0 | 0 | 0 | logfile |
✔ | 6HU7 | 0273 | 2023-07-03 | 2018-10-05 | 2.8 | 2.82 | 2.83 | 2.9 | 0.008 | 0.78 | 0.0 | 0.05 | 9.81 | 0.01 | 2.130 | 10.26 | 0.36 | 2.7 | 96.8 | 0.5 | -3.47 | 0.49 | 0.84 | 4.61 | 2.9 | 0.003 | 0.61 | 0.0 | 0.04 | 15.33 | 0.00 | 2.301 | 9.54 | 2.19 | 2.2 | 97.5 | 0.3 | 2.86 | 1.61 | 0.53 | 0.87 | 3.58 | 4890 | 609 | 7 | 0 | 0 | 0 | 0 | logfile |
✔ | 6HUJ | 0279 | 2023-07-07 | 2018-10-08 | 3.04 | 3.16 | 3.04 | 3.1 | 0.006 | 0.88 | 0.0 | 0.06 | 8.77 | 0.01 | 2.265 | 4.61 | 0.00 | 4.0 | 96.0 | 0.0 | -4.37 | 0.76 | 0.83 | 4.82 | 3.1 | 0.003 | 0.57 | 0.0 | 0.04 | 14.01 | 0.00 | 2.165 | 7.71 | 0.12 | 2.8 | 97.2 | 0.0 | 0.13 | 0.66 | 0.76 | 0.86 | 4.13 | 15255 | 1812 | 15 | 0 | 35 | 0 | 0 | logfile |
✔ | 6HUK | 0280 | 2023-07-07 | 2018-10-08 | 3.69 | 3.75 | 3.64 | 3.7 | 0.006 | 1.05 | 0.0 | 0.06 | 9.60 | 0.01 | 2.222 | 4.96 | 0.00 | 4.0 | 96.0 | 0.0 | -3.20 | 0.71 | 0.82 | 3.81 | 3.7 | 0.003 | 0.64 | 0.0 | 0.04 | 14.70 | 0.00 | 2.153 | 11.21 | 0.25 | 3.2 | 96.8 | 0.0 | -0.25 | 0.81 | 0.72 | 0.83 | 3.30 | 15300 | 1815 | 16 | 0 | 34 | 0 | 0 | logfile |
✘ | 6HUo | 0282 | 2023-07-07 | 2018-10-09 | 3.26 | 3.38 | 3.25 | 3.3 | 0.006 | 0.89 | 0.0 | 0.06 | 8.62 | 0.01 | 2.257 | 4.69 | 0.00 | 3.8 | 96.2 | 0.0 | -4.15 | 0.74 | 0.83 | 4.30 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 15227 | 1808 | 16 | 0 | 35 | 0 | 0 | logfile |
✔ | 6HUP | 0283 | 2023-07-07 | 2018-10-09 | 3.58 | 3.70 | 3.52 | 3.6 | 0.013 | 1.19 | 0.0 | 0.08 | 8.93 | 0.01 | 2.251 | 5.90 | 0.00 | 4.9 | 95.1 | 0.0 | -3.42 | 0.72 | 0.85 | 3.56 | 3.6 | 0.003 | 0.63 | 0.0 | 0.04 | 14.77 | 0.00 | 2.148 | 11.20 | 0.43 | 3.7 | 96.3 | 0.0 | -0.24 | 1.95 | 0.73 | 0.85 | 3.03 | 15265 | 1808 | 17 | 0 | 37 | 0 | 0 | logfile |
✔ | 6HV8 | 0287 | 2023-07-05 | 2018-10-10 | 4.4 | 4.51 | — | 4.4 | 0.009 | 1.62 | 2.0 | 0.08 | 10.20 | 0.01 | 1.472 | 8.97 | 1.31 | 22.1 | 77.3 | 0.6 | -4.84 | 0.74 | 0.72 | — | 4.4 | 0.003 | 0.84 | 0.0 | 0.05 | 12.78 | 0.00 | 2.083 | 14.58 | 0.00 | 14.2 | 85.8 | 0.0 | -2.84 | 1.02 | 0.74 | 0.71 | — | 9206 | 1184 | 2 | 0 | 2 | 0 | 0 | logfile |
✔ | 6HV9 | 0288 | 2023-07-19 | 2018-10-10 | 4.98 | 4.88 | — | 4.5 | 0.012 | 1.86 | 14.0 | 0.09 | 12.25 | 0.01 | 1.447 | 9.25 | 0.49 | 10.9 | 88.8 | 0.3 | -4.02 | 0.78 | 0.66 | — | 4.5 | 0.003 | 0.77 | 0.0 | 0.04 | 13.30 | 0.00 | 2.086 | 16.13 | 0.02 | 8.1 | 91.8 | 0.1 | -1.67 | 1.65 | 0.79 | 0.68 | — | 47617 | 6040 | 18 | 49 | 4 | 0 | 0 | logfile |
✘ | 6HWH | 0289 | 2023-07-18 | 2018-10-12 | 3.3 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 40632 | 4916 | 40 | 0 | 420 | 0 | 0 | logfile |
✘ | 6HYD | 0308 | 2023-07-06 | 2018-10-19 | 3.9 | 4.01 | — | 4.0 | 0.004 | 0.85 | 0.0 | 0.05 | 9.33 | 0.01 | 2.319 | 2.63 | 0.24 | 5.7 | 94.0 | 0.3 | -6.69 | 0.74 | 0.77 | 2.59 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 12168 | 1543 | 1 | 0 | 31 | 0 | 0 | logfile |
✔ | 6HYP | 0309 | 2023-07-06 | 2018-10-22 | 4.4 | 4.53 | — | 4.4 | 0.003 | 0.72 | 0.0 | 0.05 | 8.72 | 0.00 | 1.943 | 1.67 | 0.34 | 7.3 | 92.2 | 0.4 | -5.99 | 0.75 | 0.69 | — | 4.4 | 0.004 | 0.79 | 0.0 | 0.04 | 8.88 | 0.00 | 1.995 | 5.56 | 0.00 | 13.4 | 86.3 | 0.2 | -1.62 | 0.63 | 0.77 | 0.75 | — | 12392 | 2082 | 1 | 0 | 192 | 0 | 0 | logfile |
✔ | 6HZ4 | 0310 | 2023-07-16 | 2018-10-22 | 3.6 | 3.69 | 3.54 | 3.7 | 0.013 | 1.08 | 0.0 | 0.06 | 14.99 | 0.01 | 1.969 | 3.49 | 1.15 | 2.8 | 97.2 | 0.0 | -0.49 | 0.74 | 0.78 | 2.72 | 3.6 | 0.003 | 0.57 | 0.0 | 0.04 | 17.00 | 0.00 | 1.882 | 9.26 | 0.25 | 3.6 | 96.4 | 0.0 | 0.58 | 1.42 | 0.73 | 0.78 | 2.36 | 36308 | 2212 | 14 | 3 | 6 | 0 | 17933 | logfile |
✔ | 6HZ5 | 0311 | 2023-07-08 | 2018-10-22 | 4.2 | 4.28 | 4.18 | 4.3 | 0.009 | 0.97 | 0.0 | 0.05 | 14.60 | 0.01 | 1.960 | 2.94 | 0.70 | 2.7 | 97.3 | 0.0 | -0.55 | 0.79 | 0.76 | — | 4.2 | 0.003 | 0.58 | 0.0 | 0.04 | 14.66 | 0.00 | 1.803 | 11.78 | 0.05 | 4.9 | 95.1 | 0.0 | 0.00 | 1.88 | 0.81 | 0.78 | — | 67582 | 4120 | 26 | 6 | 12 | 0 | 33368 | logfile |
✔ | 6HZ6 | 0312 | 2023-07-08 | 2018-10-22 | 4.3 | 4.35 | 4.18 | 4.3 | 0.010 | 1.00 | 0.0 | 0.05 | 14.61 | 0.01 | 1.941 | 3.48 | 0.59 | 2.8 | 97.2 | 0.0 | -0.71 | 0.81 | 0.77 | — | 4.3 | 0.003 | 0.59 | 0.0 | 0.04 | 14.63 | 0.00 | 1.839 | 13.61 | 0.03 | 4.2 | 95.8 | 0.0 | -0.20 | 1.90 | 0.82 | 0.78 | — | 67582 | 4120 | 26 | 6 | 12 | 0 | 33368 | logfile |
✘ | 6HZ7 | 0313 | 2023-07-08 | 2018-10-22 | 4.3 | 4.43 | 4.32 | 4.3 | 0.008 | 0.97 | 0.0 | 0.05 | 14.60 | 0.01 | 1.959 | 2.86 | 0.59 | 2.9 | 97.1 | 0.0 | -0.47 | 0.81 | 0.76 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 67582 | 4120 | 26 | 6 | 12 | 0 | 33368 | logfile |
✔ | 6HZ8 | 0314 | 2023-07-08 | 2018-10-22 | 4.3 | 4.47 | 4.31 | 4.4 | 0.009 | 0.99 | 0.0 | 0.05 | 14.59 | 0.01 | 1.943 | 3.29 | 0.59 | 2.7 | 97.3 | 0.0 | -0.48 | 0.77 | 0.73 | — | 4.4 | 0.005 | 0.67 | 0.0 | 0.04 | 14.60 | 0.00 | 1.739 | 14.95 | 0.00 | 5.3 | 94.7 | 0.0 | -0.46 | 1.89 | 0.79 | 0.76 | — | 67582 | 4120 | 26 | 6 | 12 | 0 | 33368 | logfile |
✔ | 6HZ9 | 0315 | 2023-07-08 | 2018-10-22 | 4.8 | 4.94 | 4.76 | 4.8 | 0.009 | 1.01 | 0.0 | 0.05 | 14.59 | 0.01 | 1.957 | 3.22 | 0.51 | 2.9 | 97.1 | 0.0 | -0.60 | 0.83 | 0.76 | — | 4.8 | 0.004 | 0.62 | 0.0 | 0.04 | 14.32 | 0.00 | 1.779 | 15.48 | 0.00 | 5.2 | 94.8 | 0.0 | -0.16 | 2.82 | 0.84 | 0.78 | — | 67582 | 4120 | 26 | 6 | 12 | 0 | 33368 | logfile |