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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 7QKG | 14041 | 2022-04-04 | 2021-12-17 | 3.36 | 3.19 | 3.09 | 3.4 | 0.010 | 2.03 | 0.0 | 0.10 | 10.76 | 0.01 | 2.528 | 0.00 | 0.00 | 6.4 | 93.6 | 0.0 | -1.98 | 0.38 | 0.80 | 4.23 | 3.5 | 0.003 | 0.60 | 0.0 | 0.05 | 13.51 | 0.00 | 2.262 | 5.27 | 0.00 | 2.6 | 97.4 | 0.0 | -1.55 | 1.17 | 0.36 | 0.83 | 4.87 | 2469 | 162 | 3 | 0 | 0 | 0 | 1278 | logfile |
✘ | 6YV1 | 10940 | 2022-04-04 | 2020-04-27 | 3.4 | 4.09 | 3.01 | 3.7 | 0.002 | 0.58 | 0.0 | 0.04 | 12.66 | 0.00 | 2.272 | 8.02 | 1.85 | 1.0 | 99.0 | 0.0 | -4.45 | 0.52 | 0.76 | 1.48 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 2496 | 328 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 6MLU | 9146 | 2022-04-04 | 2018-09-28 | 4.0 | 4.03 | — | 4.0 | 0.005 | 1.05 | 0.0 | 0.06 | 9.86 | 0.01 | 2.406 | 5.97 | 0.69 | 10.6 | 89.4 | 0.0 | -4.38 | 0.40 | 0.78 | — | 4.0 | 0.006 | 1.10 | 0.0 | 0.06 | 18.04 | 0.01 | 2.171 | 32.22 | 2.08 | 13.2 | 86.8 | 0.0 | -2.63 | 3.42 | 0.44 | 0.77 | — | 2516 | 306 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 7MJi | 23874 | 2022-04-04 | 2021-04-20 | 2.81 | 3.32 | — | 3.2 | 0.006 | 0.80 | 0.0 | 0.05 | 12.43 | 0.01 | 2.367 | 2.85 | 0.00 | 2.8 | 97.2 | 0.0 | -0.83 | 0.56 | 0.84 | 4.52 | 3.2 | 0.004 | 0.58 | 0.0 | 0.04 | 15.25 | 0.00 | 2.300 | 7.73 | 1.10 | 2.8 | 97.2 | 0.0 | -0.01 | 1.44 | 0.56 | 0.85 | 4.21 | 2522 | 320 | 3 | 0 | 1 | 0 | 0 | logfile |
✔ | 7LXW | 23577 | 2022-04-04 | 2021-03-05 | 2.8 | 3.13 | 2.86 | 3.2 | 0.012 | 1.20 | 0.0 | 0.07 | 10.03 | 0.01 | 2.593 | 0.61 | 0.00 | 1.3 | 98.7 | 0.0 | 0.97 | 0.78 | 0.81 | 5.37 | 3.2 | 0.004 | 0.65 | 0.0 | 0.05 | 15.02 | 0.01 | 2.225 | 10.77 | 1.52 | 1.7 | 98.3 | 0.0 | 0.44 | 1.17 | 0.72 | 0.82 | 5.04 | 2524 | 317 | 5 | 0 | 5 | 0 | 0 | logfile |
✔ | 6N37 | 9339 | 2022-04-04 | 2018-11-14 | 3.8 | 3.51 | — | 4.2 | 0.009 | 1.42 | 0.0 | 0.06 | 16.98 | 0.01 | 2.399 | 13.15 | 0.00 | 14.7 | 85.3 | 0.0 | -5.92 | 0.51 | 0.77 | 3.18 | 3.6 | 0.004 | 0.78 | 0.0 | 0.04 | 18.43 | 0.00 | 2.266 | 20.72 | 0.80 | 11.2 | 88.8 | 0.0 | -5.14 | 0.89 | 0.52 | 0.77 | 2.42 | 2580 | 360 | 10 | 0 | 0 | 0 | 0 | logfile |
✔ | 6LRQ | 0958 | 2022-04-04 | 2020-01-16 | 3.49 | 3.59 | — | 4.0 | 0.009 | 0.85 | 0.0 | 0.05 | 11.88 | 0.00 | 2.205 | 20.30 | 0.00 | 14.8 | 85.2 | 0.0 | -4.51 | 0.46 | 0.71 | 1.87 | 4.1 | 0.006 | 0.85 | 0.0 | 0.05 | 14.46 | 0.00 | 2.147 | 19.93 | 0.74 | 12.8 | 87.2 | 0.0 | -3.04 | 1.58 | 0.46 | 0.71 | 1.16 | 2628 | 378 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 6N3B | 9350 | 2022-04-04 | 2018-11-14 | 3.8 | 3.75 | — | 4.0 | 0.010 | 1.21 | 0.0 | 0.05 | 11.40 | 0.01 | 2.253 | 20.70 | 0.00 | 13.7 | 86.3 | 0.0 | -5.17 | 0.41 | 0.71 | 2.90 | 4.0 | 0.005 | 0.87 | 0.0 | 0.04 | 16.51 | 0.01 | 2.102 | 26.34 | 1.51 | 13.2 | 86.8 | 0.0 | -5.29 | 1.48 | 0.42 | 0.71 | 1.88 | 2735 | 385 | 10 | 0 | 0 | 0 | 0 | logfile |
✔ | 6VPS | 21316 | 2022-04-04 | 2020-02-04 | 2.6 | 2.62 | 2.52 | 2.7 | 0.011 | 1.14 | 10.0 | 0.13 | 20.44 | 0.01 | 2.501 | 19.04 | 0.00 | 6.9 | 93.1 | 0.0 | -3.61 | 0.49 | 0.90 | 6.11 | 2.7 | 0.004 | 0.53 | 0.0 | 0.03 | 20.06 | 0.00 | 2.403 | 3.89 | 0.98 | 6.9 | 93.1 | 0.0 | -3.78 | 1.19 | 0.48 | 0.88 | 6.47 | 2736 | 279 | 9 | 0 | 0 | 0 | 0 | logfile |
✔ | 7LXX | 23578 | 2022-04-04 | 2021-03-05 | 3.0 | 2.96 | 3.03 | 3.2 | 0.012 | 1.18 | 0.0 | 0.06 | 10.07 | 0.01 | 2.519 | 0.57 | 0.00 | 3.6 | 96.4 | 0.0 | 0.69 | 0.75 | 0.78 | 4.22 | 3.2 | 0.003 | 0.63 | 0.0 | 0.04 | 14.25 | 0.00 | 2.191 | 8.69 | 3.51 | 2.7 | 97.3 | 0.0 | -0.17 | 1.60 | 0.77 | 0.82 | 4.30 | 2740 | 352 | 5 | 0 | 4 | 0 | 0 | logfile |
✔ | 7QK3 | 14030 | 2022-04-04 | 2021-12-17 | 2.44 | 2.73 | 2.35 | 2.7 | 0.010 | 2.07 | 0.0 | 0.11 | 12.55 | 0.01 | 2.519 | 0.00 | 0.00 | 3.4 | 96.6 | 0.0 | -3.04 | 0.38 | 0.77 | 5.65 | 2.7 | 0.003 | 0.73 | 0.0 | 0.05 | 16.22 | 0.00 | 2.309 | 3.65 | 1.28 | 4.0 | 96.0 | 0.0 | -2.83 | 1.47 | 0.40 | 0.82 | 5.18 | 2742 | 183 | 3 | 0 | 0 | 0 | 1407 | logfile |
✔ | 6UUR | 20900 | 2022-04-04 | 2019-10-31 | 3.5 | 3.51 | — | 3.6 | 0.004 | 0.76 | 0.0 | 0.05 | 15.65 | 0.00 | 2.644 | 8.15 | 0.00 | 5.3 | 94.7 | 0.0 | -4.46 | 0.56 | 0.78 | 3.10 | 3.7 | 0.007 | 0.96 | 0.0 | 0.05 | 16.19 | 0.00 | 2.098 | 14.31 | 1.20 | 11.1 | 88.9 | 0.0 | -4.61 | 2.23 | 0.52 | 0.79 | 3.03 | 2770 | 400 | 10 | 0 | 0 | 0 | 0 | logfile |
✔ | 7R7N | 24299 | 2022-04-04 | 2021-06-25 | 3.95 | 4.08 | 3.93 | 4.1 | 0.010 | 1.24 | 0.0 | 0.07 | 9.44 | 0.00 | 2.553 | 0.58 | 0.45 | 3.2 | 96.8 | 0.0 | 0.00 | 0.81 | 0.77 | 3.23 | 4.0 | 0.007 | 0.89 | 0.0 | 0.05 | 14.57 | 0.01 | 2.237 | 10.85 | 0.90 | 7.0 | 93.0 | 0.0 | -1.21 | 1.31 | 0.84 | 0.81 | 2.20 | 2790 | 391 | 4 | 0 | 3 | 0 | 0 | logfile |
✔ | 7LY0 | 23581 | 2022-04-04 | 2021-03-05 | 2.6 | 2.57 | 2.63 | 2.7 | 0.012 | 1.17 | 0.0 | 0.08 | 9.71 | 0.01 | 2.515 | 0.55 | 0.36 | 1.2 | 98.8 | 0.0 | 1.70 | 0.61 | 0.70 | 5.23 | 2.7 | 0.009 | 0.82 | 0.0 | 0.04 | 15.47 | 0.01 | 2.156 | 8.66 | 2.50 | 2.1 | 97.9 | 0.0 | 0.63 | 1.63 | 0.70 | 0.77 | 4.04 | 2805 | 354 | 5 | 0 | 6 | 0 | 0 | logfile |
✔ | 7DoU | 30800 | 2022-04-04 | 2020-12-17 | 3.0 | 3.06 | — | 3.1 | 0.003 | 0.67 | 0.0 | 0.05 | 12.73 | 0.00 | 2.164 | 9.00 | 0.00 | 9.8 | 90.2 | 0.0 | -1.42 | 0.47 | 0.82 | 2.63 | 3.1 | 0.005 | 0.74 | 0.0 | 0.05 | 18.53 | 0.00 | 2.211 | 10.04 | 2.83 | 8.5 | 91.5 | 0.0 | -0.98 | 1.37 | 0.49 | 0.85 | 2.42 | 2841 | 372 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 6CU8 | 7619 | 2022-04-04 | 2018-03-23 | 3.6 | 3.65 | — | 4.2 | 0.004 | 0.73 | 0.0 | 0.06 | 7.75 | 0.00 | 2.412 | 6.41 | 0.00 | 5.1 | 94.9 | 0.0 | -2.86 | 0.45 | 0.73 | -0.16 | 4.2 | 0.005 | 0.79 | 0.0 | 0.06 | 12.89 | 0.00 | 2.161 | 16.36 | 0.65 | 15.9 | 84.1 | 0.0 | -3.37 | 1.79 | 0.42 | 0.73 | 2.58 | 2880 | 410 | 10 | 0 | 0 | 0 | 0 | logfile |
✔ | 7RTV | 24690 | 2022-04-04 | 2021-08-15 | 3.96 | 4.06 | — | 4.1 | 0.003 | 0.68 | 0.0 | 0.04 | 16.49 | 0.00 | 2.207 | 14.04 | 0.32 | 2.8 | 97.2 | 0.0 | 3.61 | 0.41 | 0.63 | 0.10 | 4.1 | 0.004 | 0.87 | 0.0 | 0.05 | 18.50 | 0.00 | 2.197 | 15.60 | 0.32 | 3.0 | 97.0 | 0.0 | 2.57 | 0.49 | 0.42 | 0.64 | 0.60 | 2881 | 366 | 3 | 0 | 6 | 0 | 0 | logfile |
✔ | 6RiU | 4898 | 2022-04-04 | 2019-04-25 | 3.9 | 6.21 | 2.04 | 7.0 | 0.008 | 1.19 | 0.0 | 0.09 | 15.19 | 0.01 | 2.182 | 5.20 | 0.00 | 8.4 | 91.6 | 0.0 | -5.77 | 0.59 | 0.69 | 0.56 | 7.1 | 0.003 | 0.67 | 0.0 | 0.03 | 16.53 | 0.00 | 2.057 | 13.17 | 0.00 | 5.1 | 94.9 | 0.0 | -0.39 | 1.43 | 0.61 | 0.75 | 1.30 | 2882 | 182 | 2 | 0 | 0 | 0 | 1430 | logfile |
✔ | 7CAH | 30331 | 2022-04-04 | 2020-06-08 | 3.9 | 4.13 | — | 4.0 | 0.005 | 0.92 | 0.0 | 0.05 | 13.68 | 0.01 | 2.137 | 18.79 | 0.00 | 19.9 | 79.8 | 0.3 | -5.76 | 0.68 | 0.64 | 2.37 | 4.0 | 0.003 | 0.76 | 0.0 | 0.05 | 14.99 | 0.01 | 2.233 | 15.81 | 0.74 | 12.6 | 87.4 | 0.0 | -3.53 | 0.55 | 0.70 | 0.64 | 2.17 | 2889 | 404 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 6HUD | 0274 | 2022-04-04 | 2018-10-06 | 4.0 | 4.06 | — | 4.3 | 0.007 | 1.12 | 0.0 | 0.07 | 8.28 | 0.01 | 2.216 | 5.62 | 0.00 | 8.2 | 91.8 | 0.0 | -5.06 | 0.59 | 0.76 | — | 4.3 | 0.005 | 0.80 | 0.0 | 0.05 | 12.71 | 0.01 | 2.157 | 19.76 | 0.30 | 10.4 | 89.6 | 0.0 | -5.06 | 1.49 | 0.60 | 0.80 | — | 2905 | 385 | 5 | 0 | 0 | 0 | 0 | logfile |