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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✘ | 7VAV | 31866 | 2023-02-27 | 2021-08-30 | 2.8 | 2.66 | 3.31 | 3.2 | 0.002 | 0.49 | 0.0 | 0.04 | 13.26 | 0.00 | 2.035 | 3.96 | 0.00 | 1.5 | 98.5 | 0.0 | 1.80 | 0.63 | 0.80 | 2.95 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 29520 | 3787 | 14 | 0 | 4 | 0 | 0 | logfile |
✔ | 7o6Y | 12741 | 2023-02-24 | 2021-04-12 | 3.4 | 3.51 | 3.37 | 3.4 | 0.009 | 1.09 | 11.0 | 0.10 | 15.47 | 0.01 | 1.892 | 15.31 | 0.65 | 3.5 | 96.4 | 0.1 | -0.16 | 0.68 | 0.83 | 2.82 | 3.4 | 0.004 | 0.65 | 0.0 | 0.04 | 16.47 | 0.00 | 1.441 | 10.50 | 0.47 | 3.6 | 96.4 | 0.0 | 0.44 | 1.03 | 0.71 | 0.85 | 2.46 | 64866 | 7927 | 67 | 0 | 49 | 0 | 0 | logfile |
✔ | 7K1S | 22629 | 2023-02-21 | 2020-09-08 | 3.9 | 4.13 | — | 4.1 | 0.006 | 0.89 | 0.0 | 0.06 | 14.28 | 0.01 | 1.647 | 15.42 | 0.38 | 2.1 | 97.9 | 0.0 | -2.61 | 0.73 | 0.73 | 1.66 | 4.1 | 0.003 | 0.63 | 0.0 | 0.04 | 16.29 | 0.00 | 2.120 | 10.52 | 0.38 | 3.9 | 96.1 | 0.0 | -0.54 | 1.26 | 0.76 | 0.76 | 1.39 | 14409 | 1752 | 9 | 0 | 21 | 0 | 0 | logfile |
✔ | 7VAR | 31860 | 2023-02-27 | 2021-08-30 | 2.9 | 2.76 | 2.90 | 2.9 | 0.003 | 0.56 | 1.0 | 0.04 | 13.21 | 0.00 | 2.038 | 2.97 | 0.06 | 1.2 | 98.8 | 0.0 | 1.46 | 0.67 | 0.85 | 3.73 | 2.8 | 0.005 | 0.63 | 0.0 | 0.05 | 16.78 | 0.01 | 1.929 | 5.28 | 1.91 | 2.4 | 97.6 | 0.0 | 0.60 | 1.04 | 0.73 | 0.90 | 3.69 | 29520 | 3787 | 14 | 0 | 4 | 0 | 0 | logfile |
✔ | 7ZTD | 14958 | 2023-02-25 | 2022-05-09 | 4.6 | 4.11 | 4.55 | 4.3 | 0.007 | 1.04 | 0.0 | 0.06 | 15.69 | 0.01 | 2.097 | 8.15 | 0.00 | 5.4 | 94.6 | 0.0 | -2.32 | 0.70 | 0.80 | — | 4.4 | 0.003 | 0.68 | 0.0 | 0.04 | 13.92 | 0.00 | 2.049 | 9.84 | 0.00 | 4.9 | 95.1 | 0.0 | 0.37 | 10.50 | 0.68 | 0.78 | — | 25740 | 2928 | 20 | 0 | 548 | 0 | 0 | logfile |
✔ | 6VXX | 21452 | 2023-02-24 | 2020-02-25 | 2.8 | 3.32 | — | 3.2 | 0.016 | 1.35 | 0.0 | 0.09 | 10.67 | 0.01 | 2.389 | 0.81 | 0.23 | 2.4 | 97.6 | 0.0 | 0.27 | 0.73 | 0.75 | 3.36 | 3.2 | 0.004 | 0.62 | 0.0 | 0.05 | 14.44 | 0.00 | 2.179 | 7.15 | 2.31 | 3.3 | 96.7 | 0.0 | 0.15 | 0.69 | 0.72 | 0.80 | 3.07 | 23694 | 2916 | 21 | 0 | 63 | 0 | 0 | logfile |
✔ | 8E98 | 27959 | 2023-02-22 | 2022-08-26 | 3.75 | 4.03 | 3.75 | 3.8 | 0.011 | 1.07 | 1.0 | 0.05 | 15.32 | 0.01 | 2.155 | 6.38 | 0.15 | 7.9 | 92.1 | 0.0 | -1.29 | 0.79 | 0.76 | 1.70 | 3.8 | 0.003 | 0.68 | 0.0 | 0.05 | 15.34 | 0.00 | 2.189 | 6.97 | 0.29 | 7.7 | 92.3 | 0.1 | -0.70 | 0.44 | 0.80 | 0.77 | 1.61 | 17208 | 2583 | 11 | 0 | 18 | 0 | 0 | logfile |
✔ | 7Aio | 11800 | 2023-02-21 | 2020-09-28 | 3.31 | 4.02 | 3.39 | 3.9 | 0.006 | 0.77 | 0.0 | 0.11 | 12.16 | 0.01 | 2.205 | 9.32 | 0.83 | 2.9 | 97.0 | 0.1 | -1.55 | 0.68 | 0.75 | 1.72 | 3.9 | 0.003 | 0.69 | 0.0 | 0.04 | 15.07 | 0.00 | 2.222 | 11.26 | 0.42 | 3.9 | 96.0 | 0.1 | 1.02 | 0.71 | 0.65 | 0.80 | 1.37 | 13915 | 1819 | 6 | 0 | 8 | 0 | 0 | logfile |
✔ | 7CAK | 30333 | 2023-02-27 | 2020-06-08 | 3.58 | 3.74 | — | 3.5 | 0.027 | 1.65 | 3.0 | 0.09 | 11.55 | 0.01 | 1.082 | 48.79 | 1.80 | 9.4 | 89.8 | 0.8 | -4.79 | 0.72 | 0.69 | 2.67 | 3.5 | 0.003 | 0.67 | 0.0 | 0.04 | 13.35 | 0.00 | 2.025 | 12.05 | 0.06 | 5.2 | 94.7 | 0.1 | -0.98 | 1.25 | 0.78 | 0.77 | 1.99 | 30263 | 3771 | 27 | 0 | 60 | 0 | 0 | logfile |
✔ | 7WFG | 32465 | 2023-02-19 | 2021-12-26 | 4.33 | 4.89 | — | 4.3 | 0.006 | 1.01 | 1.0 | 0.06 | 11.46 | 0.01 | 2.204 | 8.95 | 1.08 | 12.3 | 87.5 | 0.2 | -5.06 | 0.68 | 0.68 | — | 4.3 | 0.003 | 0.79 | 0.0 | 0.05 | 12.88 | 0.00 | 2.119 | 21.37 | 0.36 | 11.3 | 88.6 | 0.1 | -2.50 | 1.58 | 0.71 | 0.75 | — | 9836 | 1246 | 11 | 0 | 125 | 0 | 0 | logfile |
✔ | 7NVN | 12607 | 2023-02-27 | 2021-03-15 | 3.0 | 3.12 | 2.93 | 3.1 | 0.004 | 0.62 | 0.0 | 0.04 | 14.51 | 0.00 | 1.909 | 8.75 | 1.66 | 3.2 | 96.7 | 0.1 | -2.07 | 0.64 | 0.77 | 2.98 | 3.1 | 0.003 | 0.63 | 0.0 | 0.04 | 16.96 | 0.00 | 1.103 | 10.11 | 2.54 | 3.1 | 96.9 | 0.0 | 0.86 | 1.19 | 0.73 | 0.85 | 2.77 | 69139 | 8970 | 51 | 0 | 48 | 19 | 0 | logfile |
✔ | 7T8C | 25744 | 2023-02-26 | 2021-12-16 | 4.5 | 3.21 | 4.51 | 4.6 | 0.001 | 0.42 | 0.0 | 0.04 | 7.59 | 0.00 | 2.347 | 5.08 | 0.41 | 3.6 | 96.4 | 0.0 | 0.76 | 0.63 | 0.54 | — | 4.2 | 0.002 | 0.64 | 0.0 | 0.04 | 10.96 | 0.00 | 2.130 | 10.96 | 0.00 | 4.6 | 95.4 | 0.0 | 0.62 | 1.08 | 0.66 | 0.61 | — | 28952 | 3626 | 7 | 0 | 0 | 0 | 0 | logfile |
✔ | 7VAT | 31863 | 2023-02-27 | 2021-08-30 | 3.2 | 2.73 | 3.10 | 3.1 | 0.003 | 0.53 | 0.0 | 0.04 | 13.31 | 0.00 | 1.997 | 3.69 | 0.00 | 1.8 | 98.2 | 0.0 | 1.37 | 0.63 | 0.83 | 3.27 | 3.0 | 0.006 | 0.68 | 0.0 | 0.05 | 16.22 | 0.01 | 2.035 | 6.37 | 0.32 | 3.4 | 96.6 | 0.0 | 0.35 | 0.65 | 0.69 | 0.87 | 3.15 | 29520 | 3787 | 14 | 0 | 4 | 0 | 0 | logfile |
✘ | 7LiA | 23365 | 2023-02-17 | 2021-01-26 | 3.3 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 6279 | 767 | 5 | 0 | 27 | 0 | 0 | logfile |
✔ | 6XiT | 22200 | 2023-02-23 | 2020-06-21 | 3.3 | 2.22 | — | 3.5 | 0.010 | 0.97 | 0.0 | 0.06 | 14.19 | 0.01 | 1.894 | 10.11 | 0.74 | 4.0 | 96.0 | 0.0 | -3.79 | 0.65 | 0.73 | 3.11 | 3.5 | 0.002 | 0.58 | 0.0 | 0.04 | 16.42 | 0.00 | 2.188 | 11.97 | 0.37 | 2.5 | 97.5 | 0.0 | 0.40 | 1.12 | 0.69 | 0.81 | 2.04 | 10403 | 1308 | 8 | 0 | 7 | 0 | 0 | logfile |
✔ | 7UQK | 26697 | 2023-02-26 | 2022-04-19 | 3.1 | 2.64 | 3.08 | 3.1 | 0.005 | 0.94 | 1.0 | 0.05 | 16.27 | 0.01 | 2.262 | 5.84 | 0.37 | 7.6 | 92.3 | 0.1 | -4.31 | 0.61 | 0.76 | 2.39 | 3.0 | 0.002 | 0.61 | 0.0 | 0.04 | 17.32 | 0.00 | 2.164 | 9.20 | 0.18 | 5.6 | 94.4 | 0.0 | -0.19 | 1.08 | 0.66 | 0.82 | 1.82 | 29142 | 3631 | 12 | 0 | 5 | 0 | 0 | logfile |
✔ | 7MPG | 23933 | 2023-02-23 | 2021-05-04 | 3.4 | 3.98 | — | 4.0 | 0.003 | 0.71 | 0.0 | 0.06 | 13.49 | 0.00 | 1.908 | 15.24 | 0.00 | 6.1 | 93.7 | 0.2 | -1.25 | 0.57 | 0.67 | 1.15 | 3.9 | 0.004 | 0.76 | 0.0 | 0.05 | 16.43 | 0.01 | 2.104 | 15.81 | 0.43 | 5.4 | 94.4 | 0.2 | -0.90 | 0.89 | 0.59 | 0.81 | 1.27 | 20366 | 2640 | 12 | 0 | 3 | 0 | 0 | logfile |
✔ | 6W4o | 21535 | 2023-02-26 | 2020-03-11 | 4.8 | 5.05 | 4.72 | 4.7 | 0.004 | 0.77 | 1.0 | 0.05 | 10.85 | 0.00 | 0.834 | 15.75 | 0.91 | 3.0 | 96.7 | 0.2 | -1.53 | 0.83 | 0.70 | — | 4.7 | 0.004 | 0.77 | 0.0 | 0.05 | 12.85 | 0.00 | 2.113 | 20.94 | 0.00 | 2.5 | 97.4 | 0.2 | 0.60 | 1.60 | 0.89 | 0.82 | — | 14475 | 1789 | 13 | 0 | 0 | 0 | 0 | logfile |
✘ | 6BPZ | 7128 | 2023-02-23 | 2017-11-27 | 3.8 | 3.99 | — | 3.8 | 0.010 | 1.55 | 0.0 | 0.08 | 11.48 | 0.01 | 2.260 | 3.97 | 0.14 | 7.9 | 91.8 | 0.2 | -4.66 | 0.55 | 0.66 | 1.62 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 21453 | 2523 | 3 | 0 | 177 | 0 | 0 | logfile |
✘ | 7Q9K | 13872 | 2023-02-26 | 2021-11-12 | 4.5 | 7.17 | — | 4.5 | 0.004 | 0.85 | 1.0 | 0.05 | 11.02 | 0.01 | 1.447 | 5.50 | 0.44 | 3.7 | 95.9 | 0.4 | 0.13 | 0.82 | 0.65 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 27225 | 3388 | 25 | 0 | 60 | 0 | 0 | logfile |