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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 6LZ3 | 30022 | 2022-04-05 | 2020-02-18 | 3.2 | 3.37 | 3.26 | 3.3 | 0.007 | 1.20 | 0.0 | 0.06 | 16.43 | 0.01 | 2.201 | 4.65 | 3.86 | 8.7 | 90.9 | 0.4 | -6.45 | 0.80 | 0.81 | 2.16 | 3.3 | 0.007 | 0.89 | 0.0 | 0.04 | 16.30 | 0.01 | 2.104 | 10.42 | 0.18 | 8.4 | 91.6 | 0.0 | -2.39 | 0.65 | 0.81 | 0.84 | 2.63 | 15968 | 1944 | 8 | 0 | 4 | 0 | 0 | logfile |
✔ | 6LZ1 | 30021 | 2022-04-08 | 2020-02-17 | 3.2 | 3.36 | 3.57 | 3.3 | 0.005 | 0.61 | 0.0 | 0.05 | 15.47 | 0.00 | 2.099 | 10.97 | 2.52 | 7.7 | 92.3 | 0.0 | -3.40 | 0.87 | 0.86 | 3.56 | 3.3 | 0.003 | 0.57 | 0.0 | 0.04 | 16.17 | 0.00 | 2.063 | 10.22 | 0.26 | 6.2 | 93.8 | 0.0 | -1.34 | 0.36 | 0.86 | 0.87 | 3.45 | 34492 | 4304 | 8 | 0 | 4 | 0 | 0 | logfile |
✔ | 6ZGG | 11205 | 2022-04-07 | 2020-06-18 | 3.8 | 4.33 | 4.00 | 4.0 | 0.001 | 0.41 | 0.0 | 0.04 | 5.80 | 0.00 | 2.231 | 3.79 | 1.00 | 12.4 | 87.1 | 0.5 | -2.52 | 0.84 | 0.74 | 0.73 | 4.0 | 0.004 | 0.68 | 0.0 | 0.04 | 11.53 | 0.00 | 2.149 | 9.56 | 0.11 | 4.9 | 95.1 | 0.0 | -0.82 | 1.78 | 0.87 | 0.82 | 1.18 | 25096 | 3207 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 6X3T | 22032 | 2022-04-06 | 2020-05-21 | 2.55 | 2.18 | 2.60 | 2.5 | 0.004 | 0.61 | 0.0 | 0.04 | 13.07 | 0.00 | 2.171 | 5.94 | 2.28 | 3.0 | 97.0 | 0.0 | -0.78 | 0.73 | 0.82 | 4.33 | 2.5 | 0.003 | 0.57 | 0.0 | 0.04 | 15.76 | 0.00 | 2.138 | 6.52 | 2.55 | 2.3 | 97.7 | 0.0 | 1.08 | 0.39 | 0.76 | 0.84 | 4.07 | 17415 | 2121 | 18 | 0 | 27 | 0 | 0 | logfile |
✔ | 6TFJ | 10492 | 2022-04-09 | 2019-11-14 | 2.9 | 3.01 | 2.90 | 3.0 | 0.002 | 0.43 | 0.0 | 0.04 | 9.89 | 0.00 | 2.013 | 6.76 | 0.11 | 8.4 | 91.6 | 0.0 | -2.53 | 0.70 | 0.73 | 2.51 | 3.0 | 0.003 | 0.56 | 0.0 | 0.04 | 14.94 | 0.00 | 1.962 | 9.16 | 1.53 | 7.1 | 92.9 | 0.1 | -0.73 | 1.31 | 0.70 | 0.75 | 2.11 | 48340 | 3058 | 4 | 0 | 0 | 0 | 24098 | logfile |
✔ | 6TBU | 10452 | 2022-04-05 | 2019-11-04 | 3.16 | 3.52 | — | 3.4 | 0.012 | 1.50 | 0.0 | 0.18 | 15.74 | 0.00 | 1.526 | 5.99 | 0.00 | 5.0 | 94.9 | 0.1 | -1.99 | 0.72 | 0.80 | 3.61 | 3.4 | 0.003 | 0.71 | 0.0 | 0.15 | 16.40 | 0.00 | 2.041 | 11.12 | 0.41 | 4.5 | 95.5 | 0.0 | 1.51 | 1.12 | 0.70 | 0.83 | 3.46 | 13733 | 842 | 3 | 0 | 12 | 0 | 6645 | logfile |
✔ | 6VX6 | 21431 | 2022-04-05 | 2020-02-21 | 3.0 | 3.24 | — | 3.2 | 0.005 | 0.82 | 0.0 | 0.05 | 14.09 | 0.00 | 2.260 | 4.77 | 0.94 | 1.9 | 98.1 | 0.0 | -5.69 | 0.76 | 0.87 | 3.72 | 3.2 | 0.004 | 0.64 | 0.0 | 0.04 | 16.34 | 0.00 | 2.054 | 7.91 | 1.57 | 1.5 | 98.5 | 0.0 | 0.59 | 0.98 | 0.78 | 0.89 | 3.36 | 15061 | 1830 | 10 | 0 | 6 | 0 | 0 | logfile |
✔ | 6M16 | 30038 | 2022-04-06 | 2020-02-24 | 2.83 | 2.92 | — | 2.9 | 0.010 | 1.03 | 0.0 | 0.07 | 10.43 | 0.01 | 1.146 | 5.17 | 0.36 | 7.5 | 92.4 | 0.1 | -4.10 | 0.79 | 0.85 | 3.94 | 2.9 | 0.005 | 0.67 | 0.0 | 0.05 | 13.94 | 0.00 | 2.224 | 7.43 | 2.20 | 6.2 | 93.8 | 0.0 | -1.04 | 1.18 | 0.80 | 0.87 | 3.10 | 23433 | 2895 | 18 | 0 | 60 | 0 | 0 | logfile |
✔ | 6WZG | 21972 | 2022-04-04 | 2020-05-13 | 2.3 | 2.06 | 2.22 | 2.3 | 0.012 | 1.56 | 18.0 | 0.12 | 13.99 | 0.01 | 2.270 | 4.92 | 1.65 | 2.0 | 98.0 | 0.0 | 0.81 | 0.66 | 0.71 | 4.83 | 2.3 | 0.003 | 0.57 | 0.0 | 0.04 | 16.28 | 0.00 | 2.162 | 5.95 | 1.76 | 1.8 | 98.2 | 0.0 | 1.69 | 0.99 | 0.74 | 0.86 | 4.86 | 8939 | 1165 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 6WTS | 21898 | 2022-04-05 | 2020-05-03 | 3.3 | 3.77 | — | 3.8 | 0.002 | 0.48 | 0.0 | 0.04 | 11.63 | 0.00 | 2.272 | 5.08 | 0.41 | 3.9 | 96.0 | 0.1 | -1.65 | 0.59 | 0.72 | 2.93 | 3.7 | 0.004 | 0.69 | 0.0 | 0.05 | 15.44 | 0.00 | 2.172 | 11.47 | 0.81 | 3.8 | 96.1 | 0.1 | -0.75 | 0.59 | 0.49 | 0.79 | 2.48 | 9863 | 1287 | 8 | 0 | 10 | 0 | 0 | logfile |
✔ | 6WPS | 21864 | 2022-04-07 | 2020-04-27 | 3.1 | 3.36 | 3.25 | 3.3 | 0.013 | 1.32 | 0.0 | 0.09 | 10.34 | 0.01 | 2.364 | 0.24 | 0.10 | 2.4 | 97.6 | 0.0 | 0.67 | 0.73 | 0.74 | 3.01 | 3.3 | 0.007 | 0.72 | 0.0 | 0.05 | 14.60 | 0.00 | 2.031 | 8.53 | 0.38 | 4.0 | 96.0 | 0.0 | -0.25 | 1.66 | 0.78 | 0.82 | 3.05 | 28116 | 3540 | 27 | 0 | 75 | 0 | 0 | logfile |
✔ | 6VW2 | 21410 | 2022-04-04 | 2020-02-18 | 3.4 | 3.62 | — | 3.8 | 0.006 | 1.13 | 0.0 | 0.06 | 14.20 | 0.01 | 2.292 | 24.13 | 0.00 | 27.3 | 72.7 | 0.0 | -4.46 | 0.42 | 0.71 | 2.71 | 3.9 | 0.005 | 0.96 | 0.0 | 0.05 | 14.94 | 0.00 | 2.171 | 15.12 | 0.95 | 19.5 | 80.5 | 0.0 | -4.88 | 0.44 | 0.40 | 0.72 | 1.55 | 1800 | 240 | 10 | 0 | 0 | 0 | 0 | logfile |
✔ | 6WQK | 21871 | 2022-04-04 | 2020-04-29 | 3.1 | 3.26 | — | 3.3 | 0.003 | 0.70 | 0.0 | 0.04 | 14.47 | 0.00 | 2.272 | 4.54 | 0.00 | 1.8 | 98.2 | 0.0 | -5.40 | 0.48 | 0.84 | 4.99 | 3.3 | 0.004 | 0.72 | 0.0 | 0.05 | 13.47 | 0.00 | 2.242 | 4.54 | 0.00 | 4.4 | 95.6 | 0.0 | -4.42 | 0.47 | 0.47 | 0.86 | 5.39 | 2070 | 285 | 5 | 0 | 0 | 0 | 0 | logfile |
✔ | 6YTo | 10920 | 2022-04-09 | 2020-04-24 | 4.24 | 4.32 | 4.19 | 4.3 | 0.005 | 0.70 | 0.0 | 0.04 | 13.41 | 0.00 | 2.282 | 10.16 | 0.00 | 1.9 | 98.1 | 0.0 | -0.08 | 0.67 | 0.83 | — | 4.3 | 0.003 | 0.63 | 0.0 | 0.04 | 13.55 | 0.00 | 2.010 | 9.02 | 0.06 | 2.6 | 97.4 | 0.0 | 2.79 | 0.73 | 0.67 | 0.82 | — | 41620 | 5340 | 20 | 0 | 0 | 0 | 0 | logfile |
✔ | 6LMV | 0921 | 2022-04-06 | 2019-12-26 | 3.6 | 3.70 | 3.54 | 3.7 | 0.009 | 1.00 | 0.0 | 0.05 | 14.13 | 0.01 | 2.342 | 3.51 | 0.94 | 6.2 | 93.8 | 0.0 | -5.49 | 0.62 | 0.78 | 2.30 | 3.6 | 0.003 | 0.61 | 0.0 | 0.04 | 16.84 | 0.01 | 2.203 | 6.61 | 0.37 | 3.8 | 96.2 | 0.0 | 2.97 | 3.02 | 0.68 | 0.80 | 1.82 | 17766 | 2223 | 9 | 0 | 0 | 0 | 0 | logfile |
✔ | 6LRQ | 0958 | 2022-04-04 | 2020-01-16 | 3.49 | 3.59 | — | 4.0 | 0.009 | 0.85 | 0.0 | 0.05 | 11.88 | 0.00 | 2.205 | 20.30 | 0.00 | 14.8 | 85.2 | 0.0 | -4.51 | 0.46 | 0.71 | 1.87 | 4.1 | 0.006 | 0.85 | 0.0 | 0.05 | 14.46 | 0.00 | 2.147 | 19.93 | 0.74 | 12.8 | 87.2 | 0.0 | -3.04 | 1.58 | 0.46 | 0.71 | 1.16 | 2628 | 378 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 6UVA | 20906 | 2022-04-04 | 2019-11-01 | 2.3 | 2.12 | 2.31 | 2.2 | 0.002 | 0.55 | 0.0 | 0.04 | 18.07 | 0.00 | 2.207 | 6.60 | 3.36 | 3.2 | 96.8 | 0.0 | -2.29 | 0.63 | 0.72 | 2.83 | 2.3 | 0.003 | 0.61 | 0.0 | 0.04 | 18.40 | 0.00 | 2.158 | 8.08 | 3.55 | 4.4 | 95.6 | 0.0 | 0.30 | 1.31 | 0.66 | 0.78 | 2.82 | 9561 | 1199 | 7 | 0 | 0 | 0 | 0 | logfile |
✔ | 6WB9 | 21587 | 2022-04-05 | 2020-03-26 | 3.0 | 3.13 | — | 3.1 | 0.006 | 0.83 | 0.0 | 0.05 | 13.39 | 0.01 | 1.983 | 10.23 | 0.87 | 7.7 | 92.3 | 0.0 | -3.47 | 0.66 | 0.78 | 3.45 | 3.1 | 0.003 | 0.58 | 0.0 | 0.04 | 16.28 | 0.01 | 2.193 | 10.16 | 2.49 | 6.8 | 93.2 | 0.0 | 0.20 | 0.59 | 0.68 | 0.81 | 2.98 | 14507 | 1771 | 12 | 0 | 8 | 0 | 0 | logfile |
✔ | 6VMD | 21240 | 2022-04-07 | 2020-01-27 | 4.53 | 4.68 | — | 4.5 | 0.008 | 1.16 | 0.0 | 0.06 | 16.41 | 0.01 | 2.192 | 12.90 | 0.78 | 10.1 | 89.7 | 0.1 | -3.98 | 0.92 | 0.83 | — | 4.5 | 0.003 | 0.70 | 0.0 | 0.04 | 14.92 | 0.00 | 2.089 | 17.10 | 0.00 | 7.7 | 92.2 | 0.1 | -1.15 | 0.63 | 0.92 | 0.82 | — | 27501 | 3576 | 14 | 0 | 5 | 0 | 0 | logfile |
✔ | 7A94 | 11684 | 2022-04-07 | 2020-09-01 | 3.9 | 4.30 | 4.00 | 4.0 | 0.007 | 0.86 | 3.0 | 0.05 | 13.52 | 0.01 | 2.085 | 3.53 | 0.87 | 6.8 | 93.2 | 0.0 | -1.82 | 0.89 | 0.84 | 1.86 | 4.0 | 0.003 | 0.67 | 0.0 | 0.04 | 14.37 | 0.00 | 2.088 | 7.81 | 0.12 | 4.3 | 95.7 | 0.0 | -0.30 | 1.62 | 0.89 | 0.85 | 1.40 | 30463 | 3825 | 8 | 0 | 24 | 0 | 0 | logfile |