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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 7oG6 | 12879 | 2023-02-16 | 2021-05-06 | 3.3 | 3.47 | — | 2.9 | 0.008 | 0.82 | 0.0 | 0.04 | 17.33 | 0.01 | 2.325 | 7.36 | 6.10 | 9.6 | 90.4 | 0.0 | -4.47 | 0.28 | 0.82 | 2.77 | 2.9 | 0.003 | 0.60 | 0.0 | 0.04 | 16.45 | 0.00 | 2.215 | 10.56 | 0.00 | 6.6 | 93.4 | 0.0 | -0.32 | 0.52 | 0.27 | 0.84 | 3.03 | 1602 | 199 | 2 | 5 | 0 | 0 | 0 | logfile |
✔ | 7QKH | 14042 | 2023-02-17 | 2021-12-17 | 3.17 | 3.37 | 2.07 | 3.5 | 0.011 | 2.48 | 5.0 | 0.19 | 15.22 | 0.01 | 2.470 | 1.29 | 0.00 | 14.6 | 85.4 | 0.0 | -3.56 | 0.37 | 0.74 | 3.98 | 3.5 | 0.003 | 0.96 | 0.0 | 0.22 | 15.30 | 0.00 | 2.124 | 7.42 | 0.00 | 5.2 | 94.8 | 0.0 | -2.68 | 2.29 | 0.32 | 0.70 | 4.11 | 3105 | 204 | 6 | 0 | 0 | 0 | 1593 | logfile |
✔ | 6X0V | 21985 | 2023-02-16 | 2020-05-17 | 4.5 | 4.37 | — | 4.4 | 0.003 | 0.62 | 1.0 | 0.04 | 11.58 | 0.00 | 2.285 | 15.16 | 4.48 | 3.5 | 96.0 | 0.5 | -2.45 | 0.40 | 0.74 | — | 4.4 | 0.002 | 0.49 | 0.0 | 0.04 | 12.98 | 0.00 | 2.224 | 17.83 | 0.00 | 5.0 | 95.0 | 0.0 | 2.29 | 1.20 | 0.40 | 0.76 | — | 1384 | 211 | 4 | 0 | 0 | 0 | 62 | logfile |
✔ | 7USB | 26731 | 2023-02-16 | 2022-04-23 | 3.1 | 3.28 | 3.18 | 3.3 | 0.012 | 1.70 | 0.0 | 0.11 | 10.61 | 0.01 | 2.590 | 1.61 | 1.39 | 5.5 | 94.5 | 0.0 | -0.28 | 0.59 | 0.76 | 5.40 | 3.3 | 0.007 | 0.80 | 0.0 | 0.05 | 13.30 | 0.00 | 2.421 | 5.78 | 0.00 | 6.5 | 93.5 | 0.0 | -1.76 | 1.34 | 0.61 | 0.84 | 5.47 | 1661 | 213 | 3 | 0 | 5 | 0 | 0 | logfile |
✔ | 7QL1 | 14060 | 2023-02-16 | 2021-12-19 | 3.34 | 3.41 | 3.13 | 3.4 | 0.011 | 2.01 | 0.0 | 0.10 | 11.06 | 0.01 | 2.654 | 0.29 | 0.00 | 7.5 | 92.5 | 0.0 | -3.09 | 0.42 | 0.83 | 4.57 | 3.4 | 0.007 | 0.85 | 0.0 | 0.05 | 15.42 | 0.00 | 2.104 | 12.32 | 0.00 | 4.2 | 95.8 | 0.0 | -2.34 | 1.74 | 0.39 | 0.81 | 4.21 | 1671 | 219 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 8BG9 | 16027 | 2023-02-16 | 2022-10-27 | 3.5 | 3.74 | 2.80 | 4.2 | 0.008 | 1.46 | 0.0 | 0.09 | 14.96 | 0.01 | 2.484 | 12.17 | 12.50 | 17.1 | 80.0 | 2.9 | -5.16 | 0.38 | 0.79 | 4.51 | 4.0 | 0.006 | 0.76 | 0.0 | 0.05 | 15.60 | 0.00 | 2.264 | 7.60 | 0.00 | 10.5 | 89.5 | 0.0 | -4.03 | 0.99 | 0.39 | 0.81 | 5.60 | 1692 | 222 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 7F29 | 31428 | 2023-02-16 | 2021-06-10 | 3.1 | 3.08 | — | 3.2 | 0.012 | 0.91 | 0.0 | 0.06 | 15.08 | 0.00 | 2.305 | 11.93 | 0.00 | 14.3 | 85.7 | 0.0 | -3.96 | 0.42 | 0.83 | 5.02 | 3.2 | 0.004 | 0.69 | 0.0 | 0.05 | 16.53 | 0.00 | 2.377 | 5.96 | 0.00 | 12.9 | 87.1 | 0.0 | -2.14 | 0.33 | 0.43 | 0.85 | 4.75 | 1794 | 222 | 18 | 0 | 18 | 0 | 0 | logfile |
✔ | 7QKK | 14045 | 2023-02-17 | 2021-12-17 | 2.8 | 2.31 | 2.82 | 3.2 | 0.012 | 2.17 | 4.0 | 0.12 | 13.17 | 0.02 | 2.483 | 1.41 | 0.00 | 9.5 | 90.5 | 0.0 | -3.44 | 0.37 | 0.77 | 4.39 | 3.2 | 0.003 | 0.67 | 0.0 | 0.05 | 17.21 | 0.00 | 2.149 | 11.32 | 1.01 | 7.7 | 92.3 | 0.0 | -3.49 | 2.18 | 0.34 | 0.79 | 3.16 | 3537 | 228 | 3 | 0 | 0 | 0 | 1803 | logfile |
✔ | 7M61 | 23686 | 2023-02-16 | 2021-03-25 | 3.8 | 3.83 | — | 4.1 | 0.005 | 1.01 | 0.0 | 0.08 | 12.79 | 0.00 | 2.218 | 22.02 | 0.00 | 14.3 | 85.7 | 0.0 | -4.63 | 0.49 | 0.73 | 2.45 | 3.9 | 0.004 | 0.80 | 0.0 | 0.05 | 14.85 | 0.00 | 2.106 | 21.09 | 0.00 | 14.3 | 85.7 | 0.0 | -4.66 | 0.84 | 0.48 | 0.75 | 2.97 | 1690 | 230 | 10 | 0 | 10 | 0 | 0 | logfile |
✔ | 6XTB | 10618 | 2023-02-16 | 2020-01-15 | 4.3 | 4.32 | — | 3.9 | 0.006 | 1.17 | 0.0 | 0.07 | 8.68 | 0.00 | 2.369 | 3.00 | 0.00 | 15.6 | 84.4 | 0.0 | -4.66 | 0.32 | 0.43 | — | 4.1 | 0.005 | 1.12 | 0.0 | 0.05 | 9.13 | 0.00 | 2.119 | 10.22 | 0.00 | 25.1 | 74.9 | 0.0 | -5.72 | 2.48 | 0.34 | 0.65 | — | 1161 | 235 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 6VW2 | 21410 | 2023-02-16 | 2020-02-18 | 3.4 | 3.62 | — | 3.8 | 0.006 | 1.13 | 0.0 | 0.06 | 14.20 | 0.01 | 2.292 | 24.13 | 0.00 | 27.3 | 72.7 | 0.0 | -4.46 | 0.42 | 0.71 | 2.71 | 3.9 | 0.004 | 0.83 | 0.0 | 0.05 | 14.71 | 0.00 | 2.227 | 13.08 | 0.00 | 15.5 | 84.5 | 0.0 | -4.88 | 0.43 | 0.39 | 0.70 | 1.67 | 1800 | 240 | 10 | 0 | 0 | 0 | 0 | logfile |
✔ | 7V4A | 31705 | 2023-02-16 | 2021-08-12 | 3.2 | 3.19 | — | 3.3 | 0.002 | 0.52 | 0.0 | 0.05 | 14.28 | 0.00 | 2.423 | 8.54 | 0.00 | 7.9 | 92.1 | 0.0 | -5.80 | 0.42 | 0.82 | 3.23 | 3.2 | 0.003 | 0.60 | 0.0 | 0.05 | 16.38 | 0.00 | 2.347 | 6.77 | 0.61 | 11.8 | 88.2 | 0.0 | -3.97 | 1.70 | 0.42 | 0.81 | 3.13 | 1653 | 240 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 7V22 | 31634 | 2023-02-16 | 2021-08-07 | 3.38 | 3.61 | — | 3.6 | 0.003 | 0.66 | 0.0 | 0.04 | 14.10 | 0.00 | 2.236 | 8.81 | 0.46 | 12.1 | 87.5 | 0.4 | -2.81 | 0.53 | 0.77 | 4.24 | 3.6 | 0.004 | 0.70 | 0.0 | 0.05 | 16.03 | 0.00 | 2.170 | 11.14 | 0.46 | 13.4 | 86.2 | 0.4 | -2.46 | 0.55 | 0.53 | 0.80 | 3.78 | 1958 | 240 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 7RSQ | 24677 | 2023-02-17 | 2021-08-11 | 3.8 | 4.03 | 3.73 | 4.1 | 0.008 | 0.80 | 0.0 | 0.05 | 12.74 | 0.00 | 2.360 | 4.01 | 2.88 | 3.0 | 97.0 | 0.0 | -0.64 | 0.63 | 0.68 | 1.39 | 4.1 | 0.003 | 0.53 | 0.0 | 0.03 | 15.41 | 0.00 | 2.381 | 3.76 | 0.48 | 3.0 | 97.0 | 0.0 | 2.46 | 1.83 | 0.64 | 0.71 | 1.77 | 3970 | 246 | 1 | 0 | 0 | 0 | 1958 | logfile |
✔ | 7JZU | 22574 | 2023-02-16 | 2020-09-02 | 3.1 | 3.26 | 3.10 | 3.3 | 0.015 | 1.33 | 0.0 | 0.08 | 9.63 | 0.01 | 2.509 | 0.78 | 0.00 | 3.3 | 96.7 | 0.0 | 0.23 | 0.69 | 0.76 | 4.15 | 3.3 | 0.002 | 0.55 | 0.0 | 0.04 | 14.20 | 0.00 | 2.251 | 5.70 | 0.00 | 1.6 | 98.4 | 0.0 | 0.79 | 1.62 | 0.71 | 0.79 | 3.98 | 1987 | 248 | 3 | 0 | 3 | 0 | 0 | logfile |
✔ | 8DM2 | 27524 | 2023-02-16 | 2022-07-08 | 2.91 | 3.71 | 2.85 | 3.6 | 0.007 | 0.99 | 0.0 | 0.07 | 12.79 | 0.01 | 2.362 | 4.12 | 0.44 | 2.5 | 97.5 | 0.0 | -0.51 | 0.57 | 0.66 | 2.14 | 3.6 | 0.004 | 0.72 | 0.0 | 0.05 | 16.06 | 0.00 | 2.272 | 9.45 | 2.22 | 4.6 | 95.4 | 0.0 | -0.98 | 1.12 | 0.61 | 0.74 | 3.53 | 2104 | 249 | 3 | 0 | 6 | 0 | 0 | logfile |
✔ | 7QKF | 14040 | 2023-02-17 | 2021-12-17 | 2.83 | 2.46 | 2.72 | 2.8 | 0.012 | 2.23 | 2.0 | 0.21 | 13.42 | 0.01 | 2.598 | 0.26 | 0.00 | 8.4 | 91.6 | 0.0 | -2.72 | 0.40 | 0.79 | 6.57 | 2.8 | 0.004 | 1.05 | 0.0 | 0.25 | 17.49 | 0.00 | 2.418 | 5.03 | 2.31 | 3.4 | 96.6 | 0.0 | -3.42 | 1.39 | 0.40 | 0.86 | 6.09 | 3783 | 249 | 6 | 0 | 0 | 0 | 1926 | logfile |
✔ | 7M64 | 23688 | 2023-02-16 | 2021-03-25 | 4.0 | 4.02 | — | 4.3 | 0.008 | 1.15 | 0.0 | 0.07 | 10.07 | 0.00 | 2.451 | 19.77 | 0.00 | 8.7 | 91.3 | 0.0 | -3.84 | 0.52 | 0.75 | — | 4.3 | 0.003 | 0.87 | 0.0 | 0.04 | 11.23 | 0.00 | 2.241 | 5.93 | 0.00 | 5.2 | 94.8 | 0.0 | -3.94 | 1.14 | 0.51 | 0.74 | — | 1850 | 250 | 10 | 0 | 10 | 0 | 0 | logfile |
✔ | 7ZiR | 14738 | 2023-02-16 | 2022-04-08 | 2.5 | 2.51 | 2.04 | 2.7 | 0.002 | 0.34 | 0.0 | 0.03 | 9.02 | 0.00 | 2.317 | 1.65 | 0.00 | 2.0 | 98.0 | 0.0 | -3.82 | 0.48 | 0.90 | 7.46 | 2.7 | 0.003 | 0.46 | 0.0 | 0.04 | 12.12 | 0.00 | 2.316 | 0.28 | 0.00 | 2.9 | 97.1 | 0.0 | -3.83 | 1.03 | 0.50 | 0.93 | 7.96 | 2120 | 255 | 10 | 0 | 0 | 50 | 0 | logfile |
✔ | 7YKW | 33897 | 2023-02-16 | 2022-07-25 | 3.6 | 4.09 | 3.10 | 4.0 | 0.012 | 1.76 | 0.0 | 0.09 | 11.87 | 0.00 | 2.538 | 10.73 | 0.00 | 3.9 | 96.1 | 0.0 | -3.01 | 0.63 | 0.78 | 4.01 | 4.0 | 0.004 | 0.71 | 0.0 | 0.04 | 13.95 | 0.00 | 2.258 | 9.90 | 0.00 | 0.4 | 99.6 | 0.0 | -4.70 | 1.53 | 0.63 | 0.76 | 4.18 | 1908 | 256 | 8 | 0 | 0 | 0 | 0 | logfile |