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Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 7PEW | 13359 | 2023-07-07 | 2021-08-11 | 4.6 | 5.68 | — | 4.1 | 0.006 | 0.91 | 0.0 | 0.05 | 30.24 | 0.01 | 2.249 | 5.53 | 0.00 | 1.1 | 98.9 | 0.0 | -0.20 | 0.89 | 0.85 | — | 4.0 | 0.004 | 0.66 | 0.0 | 0.04 | 29.62 | 0.00 | 2.156 | 17.10 | 0.00 | 1.9 | 98.1 | 0.0 | 1.13 | 1.61 | 0.89 | 0.85 | — | 13304 | 768 | 10 | 352 | 0 | 0 | 0 | logfile |
✔ | 8CYA | 27072 | 2023-07-05 | 2022-05-23 | 2.7 | 3.50 | 2.73 | 3.0 | 0.003 | 0.56 | 0.0 | 0.05 | 11.67 | 0.00 | 1.935 | 6.76 | 0.06 | 4.8 | 95.0 | 0.2 | 0.52 | 0.83 | 0.75 | 1.85 | 3.1 | 0.005 | 0.55 | 0.0 | 0.04 | 12.83 | 0.00 | 2.004 | 10.58 | 0.47 | 5.7 | 94.2 | 0.1 | -0.07 | 0.40 | 0.85 | 0.80 | 2.12 | 57833 | 3681 | 29 | 0 | 88 | 0 | 27935 | logfile |
✔ | 8B70 | 15894 | 2023-07-05 | 2022-09-28 | 3.3 | 2.85 | 3.11 | 3.3 | 0.011 | 1.45 | 0.0 | 0.06 | 15.75 | 0.00 | 2.148 | 8.20 | 0.84 | 4.8 | 95.2 | 0.0 | 1.55 | 0.40 | 0.68 | 1.87 | 3.2 | 0.003 | 0.76 | 0.0 | 0.04 | 16.60 | 0.00 | 2.223 | 7.47 | 0.00 | 3.9 | 96.1 | 0.0 | 1.50 | 0.93 | 0.61 | 0.86 | 1.56 | 9258 | 1144 | 4 | 0 | 12 | 0 | 0 | logfile |
✔ | 8FHT | 29103 | 2023-07-04 | 2022-12-15 | 3.02 | 3.34 | 3.05 | 3.2 | 0.004 | 0.63 | 3.0 | 0.05 | 12.98 | 0.00 | 2.220 | 6.63 | 0.96 | 1.8 | 98.2 | 0.0 | 2.06 | 0.60 | 0.80 | 2.43 | 3.3 | 0.003 | 0.50 | 0.0 | 0.04 | 14.20 | 0.00 | 2.169 | 6.85 | 0.41 | 2.3 | 97.7 | 0.0 | 2.48 | 0.39 | 0.57 | 0.80 | 2.13 | 7006 | 936 | 4 | 0 | 4 | 0 | 0 | logfile |
✔ | 7FFE | 31566 | 2023-07-15 | 2021-07-23 | 3.5 | 3.89 | — | 3.9 | 0.007 | 0.93 | 0.0 | 0.06 | 9.40 | 0.01 | 2.211 | 4.93 | 0.28 | 6.6 | 93.3 | 0.1 | -3.34 | 0.51 | 0.79 | 2.77 | 3.8 | 0.004 | 0.70 | 0.0 | 0.04 | 14.15 | 0.00 | 2.030 | 9.94 | 0.22 | 5.8 | 94.2 | 0.1 | -0.74 | 2.44 | 0.51 | 0.83 | 2.42 | 33063 | 4275 | 16 | 0 | 0 | 0 | 0 | logfile |
✔ | 8iGS | 35439 | 2023-07-11 | 2023-02-21 | 3.4 | 3.65 | 3.25 | 3.4 | 0.003 | 0.59 | 0.0 | 0.04 | 19.27 | 0.00 | 1.981 | 5.07 | 1.04 | 5.5 | 94.5 | 0.0 | 0.31 | 0.80 | 0.87 | 1.89 | 3.4 | 0.003 | 0.58 | 0.0 | 0.04 | 19.32 | 0.00 | 2.070 | 7.76 | 0.32 | 4.7 | 95.3 | 0.0 | 0.73 | 0.47 | 0.80 | 0.87 | 1.86 | 24481 | 2925 | 8 | 73 | 3 | 0 | 0 | logfile |
✔ | 8EYX | 28723 | 2023-07-10 | 2022-10-29 | 4.5 | 4.99 | 4.61 | 4.1 | 0.006 | 0.76 | 1.0 | 0.05 | 12.87 | 0.00 | 1.857 | 33.88 | 1.18 | 9.7 | 89.7 | 0.6 | -1.73 | 0.86 | 0.74 | — | 4.1 | 0.004 | 0.68 | 0.0 | 0.04 | 12.85 | 0.00 | 2.136 | 23.75 | 0.06 | 9.1 | 90.7 | 0.2 | -1.42 | 1.18 | 0.89 | 0.83 | — | 14298 | 1773 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 5WFE | 8827 | 2023-07-07 | 2017-07-11 | 3.64 | 4.04 | — | 3.8 | 0.004 | 0.66 | 0.0 | 0.04 | 22.67 | 0.00 | 1.891 | 14.85 | 0.09 | 4.6 | 95.3 | 0.1 | -1.79 | 0.80 | 0.67 | 1.90 | 3.8 | 0.004 | 0.75 | 0.0 | 0.04 | 24.02 | 0.00 | 2.068 | 17.06 | 0.60 | 4.2 | 95.8 | 0.0 | 0.36 | 2.54 | 0.84 | 0.75 | 1.62 | 15523 | 1447 | 12 | 210 | 0 | 0 | 0 | logfile |
✔ | 7STi | 25429 | 2023-07-08 | 2021-11-13 | 4.9 | 6.34 | — | 4.3 | 0.004 | 0.67 | 0.0 | 0.04 | 13.50 | 0.00 | 2.001 | 25.75 | 0.20 | 7.8 | 92.0 | 0.2 | -1.35 | 0.89 | 0.83 | — | 4.3 | 0.004 | 0.65 | 0.0 | 0.04 | 13.42 | 0.00 | 2.110 | 26.65 | 0.00 | 9.2 | 90.6 | 0.2 | -1.29 | 1.61 | 0.89 | 0.84 | — | 13531 | 1678 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 7RNN | 24580 | 2023-07-03 | 2021-07-29 | 2.86 | 2.05 | — | 3.2 | 0.008 | 0.80 | 0.0 | 0.14 | 13.56 | 0.00 | 1.929 | 6.74 | 0.55 | 3.4 | 96.6 | 0.0 | -1.11 | 0.50 | 0.76 | 5.00 | 3.2 | 0.004 | 0.64 | 0.0 | 0.04 | 15.50 | 0.00 | 2.212 | 6.34 | 1.09 | 1.9 | 98.1 | 0.0 | 0.60 | 0.97 | 0.49 | 0.87 | 4.03 | 4000 | 540 | 2 | 0 | 2 | 0 | 0 | logfile |
✔ | 7PR1 | 13607 | 2023-07-05 | 2021-09-20 | 2.81 | 3.22 | 2.90 | 3.1 | 0.007 | 0.95 | 0.0 | 0.05 | 14.13 | 0.00 | 2.053 | 7.90 | 0.00 | 2.1 | 97.9 | 0.0 | -0.18 | 0.63 | 0.83 | 3.36 | 3.1 | 0.003 | 0.58 | 0.0 | 0.04 | 16.59 | 0.00 | 2.171 | 9.35 | 2.37 | 2.3 | 97.7 | 0.0 | 1.86 | 0.94 | 0.57 | 0.80 | 2.97 | 9222 | 1174 | 4 | 0 | 4 | 0 | 0 | logfile |
✔ | 7XGR | 33187 | 2023-07-04 | 2022-04-06 | 2.6 | 3.38 | 2.47 | 3.2 | 0.004 | 0.71 | 0.0 | 0.04 | 18.88 | 0.00 | 2.259 | 8.70 | 2.17 | 6.3 | 93.7 | 0.0 | -0.28 | 0.52 | 0.75 | 2.35 | 3.2 | 0.002 | 0.61 | 0.0 | 0.03 | 19.07 | 0.00 | 2.203 | 7.19 | 1.96 | 5.8 | 94.2 | 0.0 | 2.24 | 1.25 | 0.55 | 0.83 | 2.09 | 4340 | 546 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 8E4o | 27894 | 2023-07-03 | 2022-08-18 | 3.43 | 3.87 | 3.39 | 3.6 | 0.002 | 0.44 | 0.0 | 0.03 | 11.67 | 0.01 | 2.257 | 5.45 | 0.45 | 1.8 | 98.2 | 0.0 | 2.99 | 0.68 | 0.73 | 2.38 | 3.7 | 0.003 | 0.66 | 0.0 | 0.03 | 13.35 | 0.00 | 2.024 | 6.81 | 0.19 | 3.0 | 97.0 | 0.0 | 2.90 | 0.72 | 0.72 | 0.80 | 1.84 | 53496 | 3588 | 8 | 0 | 4 | 0 | 26024 | logfile |
✘ | 3JAF | 6346 | 2023-07-07 | 2015-06-08 | 3.8 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 13865 | 1710 | 15 | 0 | 15 | 0 | 0 | logfile |
✔ | 7PFE | 13373 | 2023-07-08 | 2021-08-11 | 4.4 | 5.35 | — | 3.9 | 0.007 | 0.94 | 0.0 | 0.05 | 29.84 | 0.01 | 2.264 | 6.87 | 0.00 | 1.5 | 98.5 | 0.0 | -0.43 | 0.91 | 0.85 | — | 3.9 | 0.004 | 0.67 | 0.0 | 0.04 | 29.59 | 0.00 | 2.112 | 17.93 | 0.00 | 2.9 | 97.1 | 0.0 | 0.87 | 1.61 | 0.91 | 0.85 | — | 13880 | 843 | 11 | 354 | 0 | 0 | 0 | logfile |
✔ | 7XH8 | 33191 | 2023-07-03 | 2022-04-07 | 2.99 | 3.75 | 3.32 | 3.6 | 0.014 | 1.81 | 0.0 | 0.09 | 13.61 | 0.03 | 2.472 | 0.80 | 0.88 | 3.5 | 95.5 | 1.0 | -1.88 | 0.61 | 0.58 | 1.19 | 3.3 | 0.003 | 0.85 | 0.0 | 0.04 | 15.31 | 0.00 | 2.111 | 19.43 | 4.09 | 6.0 | 94.0 | 0.0 | -0.67 | 1.99 | 0.67 | 0.74 | 1.39 | 3161 | 404 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 7T22 | 25609 | 2023-07-11 | 2021-12-02 | 4.2 | 4.73 | — | 4.4 | 0.004 | 1.41 | 0.0 | 0.04 | 10.32 | 0.00 | 1.992 | 5.52 | 1.18 | 1.5 | 98.5 | 0.0 | 2.51 | 0.83 | 0.75 | — | 4.4 | 0.004 | 1.08 | 0.0 | 0.04 | 12.24 | 0.00 | 0.943 | 23.53 | 0.00 | 3.4 | 96.6 | 0.0 | 0.80 | 0.90 | 0.85 | 0.79 | — | 24536 | 3084 | 15 | 13 | 15 | 0 | 0 | logfile |
✔ | 7D7R | 30610 | 2023-07-04 | 2020-10-05 | 4.0 | 4.04 | — | 4.0 | 0.004 | 0.96 | 0.0 | 0.05 | 14.87 | 0.01 | 2.270 | 5.25 | 0.36 | 3.6 | 96.2 | 0.2 | -3.66 | 0.51 | 0.58 | — | 3.9 | 0.003 | 0.85 | 0.0 | 0.04 | 15.86 | 0.00 | 2.198 | 16.53 | 0.91 | 3.4 | 96.6 | 0.0 | 0.50 | 1.32 | 0.50 | 0.58 | — | 7680 | 1160 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 8BEW | 16011 | 2023-07-10 | 2022-10-22 | 3.49 | 3.73 | 3.58 | 3.7 | 0.003 | 0.74 | 0.0 | 0.05 | 14.61 | 0.00 | 2.171 | 4.97 | 0.09 | 4.1 | 95.7 | 0.2 | -1.10 | 0.73 | 0.74 | 1.44 | 3.7 | 0.003 | 0.62 | 0.0 | 0.04 | 16.31 | 0.00 | 2.082 | 8.27 | 0.22 | 4.3 | 95.6 | 0.1 | -0.35 | 0.47 | 0.73 | 0.84 | 1.19 | 21004 | 2704 | 12 | 0 | 24 | 0 | 0 | logfile |
✔ | 7PBD | 13290 | 2023-07-08 | 2021-08-02 | 3.04 | 3.81 | 3.11 | 3.5 | 0.005 | 0.76 | 0.0 | 0.10 | 13.11 | 0.00 | 2.062 | 4.44 | 0.00 | 3.8 | 96.2 | 0.0 | 0.14 | 0.77 | 0.82 | 3.43 | 3.4 | 0.004 | 0.63 | 0.0 | 0.04 | 14.23 | 0.00 | 2.179 | 6.81 | 0.32 | 3.1 | 96.8 | 0.1 | 0.95 | 1.14 | 0.78 | 0.85 | 2.91 | 14822 | 1784 | 15 | 0 | 25 | 0 | 0 | logfile |