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Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 6PoM | 20416 | 2023-02-17 | 2019-07-04 | 4.9 | 5.01 | — | 5.0 | 0.003 | 0.64 | 0.0 | 0.03 | 17.29 | 0.00 | 2.075 | 3.10 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.61 | 0.64 | — | 5.0 | 0.010 | 1.28 | 0.0 | 0.06 | 21.46 | 0.01 | 1.930 | 61.80 | 0.00 | 0.0 | 0.0 | 0.0 | — | 1.76 | 0.75 | 0.80 | — | 4937 | 0 | 2 | 230 | 0 | 0 | 0 | logfile |
✔ | 7EGK | 31135 | 2023-02-19 | 2021-03-24 | 2.7 | 2.79 | 2.60 | 2.7 | 0.008 | 0.97 | 0.0 | 0.05 | 14.76 | 0.01 | 2.240 | 2.92 | 8.02 | 3.2 | 96.5 | 0.2 | -5.67 | 0.74 | 0.87 | 3.24 | 2.7 | 0.003 | 0.65 | 0.0 | 0.04 | 16.50 | 0.00 | 2.213 | 6.00 | 1.84 | 2.8 | 97.2 | 0.0 | 0.97 | 1.21 | 0.72 | 0.88 | 2.11 | 9894 | 1317 | 12 | 0 | 6 | 0 | 0 | logfile |
✔ | 7K5K | 22682 | 2023-02-24 | 2020-09-17 | 2.66 | 2.76 | 2.81 | 2.7 | 0.007 | 0.69 | 0.0 | 0.05 | 15.27 | 0.00 | 1.722 | 6.95 | 4.06 | 10.2 | 89.7 | 0.0 | -3.21 | 0.79 | 0.85 | 4.74 | 2.7 | 0.005 | 0.64 | 0.0 | 0.05 | 15.74 | 0.00 | 1.999 | 6.63 | 2.58 | 7.6 | 92.4 | 0.0 | -1.06 | 0.32 | 0.80 | 0.87 | 4.16 | 24224 | 3270 | 12 | 0 | 18 | 0 | 0 | logfile |
✔ | 6ZB4 | 11144 | 2023-02-25 | 2020-06-06 | 3.03 | 3.12 | 3.02 | 3.1 | 0.006 | 0.67 | 0.0 | 0.05 | 15.92 | 0.01 | 1.814 | 4.85 | 3.84 | 8.2 | 91.7 | 0.1 | -4.11 | 0.75 | 0.83 | 3.79 | 3.1 | 0.006 | 0.70 | 0.0 | 0.05 | 16.31 | 0.01 | 2.115 | 3.61 | 0.33 | 8.6 | 91.4 | 0.0 | -1.98 | 1.86 | 0.78 | 0.87 | 3.73 | 24841 | 3133 | 7 | 0 | 30 | 0 | 0 | logfile |
✔ | 7SWo | 25477 | 2023-02-17 | 2021-11-20 | 4.1 | 3.78 | — | 3.8 | 0.007 | 0.89 | 0.0 | 0.05 | 14.43 | 0.01 | 2.215 | 26.02 | 0.19 | 10.0 | 90.0 | 0.0 | -2.59 | 0.65 | 0.76 | — | 3.8 | 0.003 | 0.72 | 0.0 | 0.05 | 13.81 | 0.01 | 2.118 | 18.05 | 0.00 | 6.0 | 94.0 | 0.0 | -1.25 | 0.53 | 0.64 | 0.74 | — | 4784 | 627 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 7BW4 | 30226 | 2023-02-18 | 2020-04-13 | 3.7 | 3.92 | — | 3.8 | 0.004 | 0.66 | 1.0 | 0.05 | 15.16 | 0.00 | 2.078 | 16.25 | 1.68 | 4.3 | 95.5 | 0.2 | -2.50 | 0.77 | 0.77 | 1.82 | 3.8 | 0.003 | 0.74 | 0.0 | 0.05 | 16.62 | 0.00 | 2.197 | 15.13 | 0.53 | 4.8 | 95.1 | 0.1 | -1.02 | 1.36 | 0.77 | 0.77 | 1.41 | 8605 | 1078 | 5 | 0 | 2 | 0 | 0 | logfile |
✔ | 7PKo | 13474 | 2023-02-23 | 2021-08-26 | 3.9 | 4.01 | — | 3.9 | 0.004 | 0.66 | 0.0 | 0.04 | 14.59 | 0.00 | 2.205 | 10.80 | 0.00 | 7.5 | 92.5 | 0.0 | -4.16 | 0.76 | 0.82 | 2.59 | 3.9 | 0.003 | 0.65 | 0.0 | 0.04 | 16.06 | 0.00 | 2.180 | 12.19 | 0.62 | 5.6 | 94.4 | 0.0 | -0.75 | 0.64 | 0.75 | 0.81 | 2.41 | 20368 | 2504 | 8 | 0 | 0 | 0 | 0 | logfile |
✔ | 7M99 | 23720 | 2023-02-22 | 2021-03-30 | 3.2 | 2.95 | 3.12 | 3.2 | 0.014 | 1.53 | 0.0 | 0.10 | 16.60 | 0.01 | 1.823 | 7.28 | 0.45 | 1.8 | 98.2 | 0.0 | -0.49 | 0.52 | 0.69 | 1.97 | 3.2 | 0.006 | 0.68 | 0.0 | 0.04 | 19.31 | 0.01 | 1.836 | 6.97 | 0.33 | 3.9 | 96.1 | 0.0 | 0.53 | 2.05 | 0.60 | 0.83 | 2.41 | 17613 | 2056 | 17 | 42 | 14 | 0 | 0 | logfile |
✔ | 7Lo6 | 23462 | 2023-02-22 | 2021-02-09 | 3.9 | 4.03 | — | 3.8 | 0.011 | 0.94 | 0.0 | 0.07 | 13.81 | 0.01 | 1.951 | 19.52 | 0.64 | 12.9 | 87.1 | 0.0 | -5.44 | 0.85 | 0.85 | 2.14 | 3.8 | 0.004 | 0.72 | 0.0 | 0.05 | 15.31 | 0.00 | 2.095 | 11.93 | 0.69 | 6.1 | 93.9 | 0.0 | -2.21 | 1.66 | 0.85 | 0.85 | 1.65 | 18006 | 2198 | 27 | 0 | 62 | 0 | 0 | logfile |
✔ | 7XZX | 33533 | 2023-02-23 | 2022-06-03 | 4.53 | 5.42 | 4.49 | 4.5 | 0.006 | 0.99 | 0.0 | 0.06 | 25.64 | 0.00 | 1.688 | 10.77 | 0.15 | 1.7 | 98.3 | 0.0 | 0.69 | 0.69 | 0.37 | — | 4.4 | 0.004 | 0.65 | 0.0 | 0.04 | 25.63 | 0.00 | 2.095 | 14.00 | 0.00 | 2.6 | 97.4 | 0.0 | 1.09 | 1.71 | 0.90 | 0.82 | — | 19270 | 1554 | 14 | 342 | 0 | 0 | 0 | logfile |
✔ | 7VPZ | 32077 | 2023-02-27 | 2021-10-18 | 4.14 | 4.38 | 4.16 | 4.1 | 0.005 | 0.79 | 1.0 | 0.05 | 18.57 | 0.00 | 1.887 | 6.54 | 0.52 | 3.6 | 96.3 | 0.0 | -0.02 | 0.81 | 0.71 | — | 4.2 | 0.003 | 0.69 | 0.0 | 0.04 | 18.61 | 0.00 | 1.968 | 17.15 | 0.00 | 3.2 | 96.8 | 0.0 | -0.08 | 0.71 | 0.83 | 0.75 | — | 30593 | 3474 | 14 | 173 | 9 | 0 | 0 | logfile |
✔ | 6JMQ | 9849 | 2023-02-19 | 2019-03-13 | 3.31 | 3.52 | 3.25 | 3.5 | 0.005 | 0.95 | 0.0 | 0.05 | 14.01 | 0.01 | 2.293 | 3.84 | 0.29 | 4.3 | 95.6 | 0.1 | -5.09 | 0.71 | 0.79 | 2.84 | 3.5 | 0.004 | 0.71 | 0.0 | 0.04 | 15.56 | 0.00 | 2.049 | 8.75 | 0.29 | 4.5 | 95.5 | 0.0 | -1.48 | 1.46 | 0.74 | 0.83 | 2.73 | 9950 | 1223 | 7 | 0 | 74 | 0 | 0 | logfile |
✔ | 6CG0 | 7470 | 2023-02-23 | 2018-02-19 | 3.17 | 3.69 | — | 3.3 | 0.003 | 0.60 | 0.0 | 0.04 | 20.01 | 0.00 | 2.205 | 15.24 | 4.08 | 2.5 | 97.4 | 0.1 | -2.47 | 0.91 | 0.85 | 3.15 | 3.3 | 0.002 | 0.54 | 0.0 | 0.04 | 20.27 | 0.00 | 2.134 | 7.49 | 0.35 | 2.1 | 97.9 | 0.0 | 0.58 | 0.52 | 0.93 | 0.88 | 2.73 | 20080 | 1989 | 13 | 212 | 4 | 0 | 0 | logfile |
✔ | 8A5o | 15179 | 2023-02-20 | 2022-06-15 | 3.2 | 3.27 | 3.09 | 3.2 | 0.016 | 1.87 | 2.0 | 0.10 | 14.05 | 0.01 | 1.981 | 1.08 | 0.72 | 3.8 | 96.0 | 0.2 | -1.14 | 0.70 | 0.80 | 3.54 | 3.2 | 0.003 | 0.55 | 0.0 | 0.04 | 16.37 | 0.00 | 2.042 | 5.80 | 0.29 | 2.0 | 97.9 | 0.1 | 1.08 | 1.66 | 0.81 | 0.86 | 2.49 | 12571 | 1555 | 8 | 0 | 6 | 0 | 0 | logfile |
✔ | 6K9L | 9950 | 2023-02-27 | 2019-06-16 | 4.27 | 4.50 | — | 4.2 | 0.001 | 0.49 | 0.0 | 0.04 | 9.31 | 0.00 | 2.240 | 4.75 | 4.95 | 4.6 | 95.4 | 0.0 | -3.11 | 0.84 | 0.71 | — | 4.2 | 0.002 | 0.68 | 0.0 | 0.04 | 9.69 | 0.00 | 2.113 | 12.20 | 0.00 | 7.1 | 92.9 | 0.0 | 0.72 | 1.80 | 0.85 | 0.75 | — | 30601 | 5103 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 6T8o | 10402 | 2023-02-22 | 2019-10-24 | 3.99 | 4.07 | — | 4.0 | 0.006 | 0.91 | 0.0 | 0.05 | 12.50 | 0.01 | 2.270 | 4.39 | 0.20 | 5.8 | 94.2 | 0.0 | -4.05 | 0.79 | 0.82 | 1.99 | 4.0 | 0.004 | 0.75 | 0.0 | 0.05 | 16.30 | 0.00 | 2.091 | 13.45 | 0.65 | 5.1 | 94.9 | 0.0 | -0.43 | 1.34 | 0.80 | 0.83 | 1.40 | 18806 | 2374 | 14 | 26 | 6 | 0 | 0 | logfile |
✔ | 7ECW | 31059 | 2023-02-24 | 2021-03-13 | 3.1 | 3.18 | — | 3.2 | 0.007 | 0.89 | 1.0 | 0.06 | 16.81 | 0.01 | 1.950 | 7.43 | 1.10 | 6.1 | 93.8 | 0.1 | -3.73 | 0.75 | 0.82 | 2.64 | 3.2 | 0.002 | 0.54 | 0.0 | 0.04 | 17.52 | 0.00 | 2.221 | 6.10 | 0.14 | 5.2 | 94.8 | 0.0 | -0.27 | 1.22 | 0.76 | 0.84 | 2.08 | 23089 | 2934 | 13 | 70 | 0 | 0 | 0 | logfile |
✔ | 6Bo9 | 7121 | 2023-02-23 | 2017-11-18 | 4.0 | 4.05 | — | 4.0 | 0.007 | 1.17 | 0.0 | 0.06 | 10.85 | 0.01 | 2.245 | 8.51 | 0.97 | 12.1 | 87.9 | 0.0 | -4.34 | 0.59 | 0.59 | — | 4.0 | 0.004 | 0.95 | 0.0 | 0.05 | 16.76 | 0.00 | 2.120 | 17.02 | 0.97 | 9.8 | 90.2 | 0.0 | -1.02 | 1.59 | 0.76 | 0.78 | — | 19048 | 2372 | 4 | 0 | 0 | 0 | 0 | logfile |
✔ | 3J8A | 6124 | 2023-02-21 | 2014-10-08 | 3.7 | 3.90 | — | 3.8 | 0.006 | 1.27 | 0.0 | 0.05 | 14.88 | 0.01 | 2.145 | 19.64 | 6.28 | 11.2 | 87.4 | 1.4 | -5.31 | 0.73 | 0.80 | 2.48 | 3.8 | 0.003 | 0.84 | 0.0 | 0.05 | 16.36 | 0.00 | 1.960 | 13.80 | 0.71 | 5.1 | 94.0 | 0.8 | -2.15 | 0.52 | 0.72 | 0.82 | 1.56 | 15800 | 1835 | 12 | 0 | 280 | 0 | 0 | logfile |
✔ | 6GKH | 0023 | 2023-02-19 | 2018-05-21 | 4.06 | 4.18 | 3.92 | 4.1 | 0.006 | 1.49 | 0.0 | 0.05 | 9.62 | 0.00 | 1.641 | 13.64 | 0.00 | 10.0 | 90.0 | 0.0 | -4.26 | 0.61 | 0.79 | — | 4.1 | 0.004 | 1.06 | 0.0 | 0.04 | 12.18 | 0.00 | 1.774 | 25.31 | 0.16 | 10.2 | 89.8 | 0.0 | -1.11 | 1.88 | 0.61 | 0.81 | — | 10587 | 685 | 4 | 30 | 4 | 0 | 4399 | logfile |