The table shows a selection of parameters. Activate more columns using
the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 8D6X | 27225 | 2023-02-27 | 2022-06-06 | 3.2 | 10.22 | — | — | 0.003 | 0.62 | 0.0 | 0.04 | 12.14 | 0.00 | 2.195 | 17.76 | 0.06 | 2.6 | 97.4 | 0.0 | 1.17 | 0.70 | 0.42 | 0.14 | — | 0.003 | 0.68 | 0.0 | 0.04 | 14.52 | 0.00 | 2.006 | 31.08 | 0.17 | 4.9 | 95.1 | 0.0 | 0.20 | 4.65 | 0.78 | 0.54 | 0.09 | 68362 | 8957 | 41 | 0 | 0 | 0 | 0 | logfile |
✔ | 7URM | 26714 | 2023-02-16 | 2022-04-22 | 3.0 | 3.11 | 3.56 | 2.9 | 0.009 | 1.41 | 0.0 | 0.11 | 23.67 | 0.01 | 2.440 | 0.70 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.14 | 0.53 | — | 3.0 | 0.007 | 1.16 | 0.0 | 0.05 | 22.87 | 0.01 | 1.983 | 29.94 | 0.00 | 0.0 | 0.0 | 0.0 | — | 1.70 | 0.15 | 0.54 | — | 1905 | 0 | 1 | 90 | 0 | 0 | 0 | logfile |
✔ | 7WGC | 32483 | 2023-02-17 | 2021-12-28 | 3.6 | 3.85 | — | 3.8 | 0.003 | 0.62 | 0.0 | 0.04 | 14.73 | 0.00 | 2.191 | 10.26 | 0.00 | 3.8 | 96.2 | 0.0 | -0.11 | 0.56 | 0.55 | 1.21 | 3.8 | 0.003 | 0.64 | 0.0 | 0.04 | 16.12 | 0.00 | 2.172 | 11.75 | 0.00 | 4.3 | 95.7 | 0.0 | 0.17 | 0.38 | 0.56 | 0.55 | 1.00 | 6527 | 795 | 4 | 0 | 5 | 0 | 0 | logfile |
✔ | 7UBB | 26437 | 2023-02-18 | 2022-03-14 | 4.5 | 5.42 | 4.95 | 5.3 | 0.002 | 0.68 | 0.0 | 0.04 | 14.32 | 0.00 | 2.231 | 14.38 | 0.00 | 0.9 | 99.1 | 0.0 | -1.04 | 0.40 | 0.59 | — | 5.3 | 0.002 | 0.62 | 0.0 | 0.04 | 13.88 | 0.00 | 2.170 | 12.64 | 1.01 | 2.7 | 97.3 | 0.0 | -1.17 | 1.94 | 0.37 | 0.55 | — | 7448 | 896 | 8 | 0 | 0 | 0 | 0 | logfile |
✔ | 7K8A | 22724 | 2023-02-19 | 2020-09-26 | 3.65 | 3.57 | — | 3.7 | 0.004 | 0.92 | 1.0 | 0.05 | 13.38 | 0.01 | 2.226 | 16.09 | 0.17 | 6.4 | 93.6 | 0.0 | -1.30 | 0.40 | 0.55 | 0.67 | 3.7 | 0.003 | 0.78 | 0.0 | 0.04 | 15.86 | 0.01 | 2.225 | 15.74 | 0.34 | 4.6 | 95.3 | 0.1 | -0.56 | 0.46 | 0.42 | 0.55 | 0.22 | 5513 | 723 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 7WoG | 32651 | 2023-02-17 | 2022-01-21 | 4.06 | 2.95 | — | 2.0 | 0.001 | 0.41 | 0.0 | 0.04 | 8.09 | 0.00 | 2.293 | 10.22 | 3.78 | 8.0 | 92.0 | 0.0 | -3.98 | 0.51 | 0.51 | — | 2.2 | 0.003 | 0.71 | 0.0 | 0.04 | 10.94 | 0.00 | 2.020 | 21.35 | 0.00 | 13.1 | 86.9 | 0.0 | -2.59 | 1.02 | 0.54 | 0.55 | — | 3362 | 433 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 6HD5 | 0201 | 2023-02-19 | 2018-08-17 | 4.8 | 6.01 | — | 5.9 | 0.001 | 0.40 | 0.0 | 0.03 | 8.70 | 0.00 | 2.289 | 4.36 | 0.10 | 10.5 | 88.4 | 1.1 | -1.81 | 0.36 | 0.32 | — | 5.9 | 0.004 | 0.81 | 0.0 | 0.04 | 11.92 | 0.01 | 2.072 | 21.78 | 0.00 | 6.4 | 93.5 | 0.1 | -0.40 | 2.04 | 0.46 | 0.56 | — | 9707 | 1234 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 7U13 | 26276 | 2023-02-17 | 2022-02-19 | 2.9 | 3.67 | — | 4.2 | 0.017 | 2.41 | 0.0 | 0.07 | 17.78 | 0.01 | 2.120 | 29.95 | 6.30 | 11.3 | 88.0 | 0.8 | -3.06 | 0.30 | 0.47 | 1.37 | 4.2 | 0.005 | 0.96 | 0.0 | 0.06 | 18.45 | 0.00 | 2.194 | 14.61 | 3.67 | 12.3 | 87.7 | 0.0 | -4.21 | 6.72 | 0.33 | 0.56 | 1.63 | 3456 | 405 | 6 | 0 | 12 | 0 | 0 | logfile |
✔ | 7UWK | 26834 | 2023-02-21 | 2022-05-03 | 4.4 | 3.30 | 4.35 | 2.2 | 0.004 | 0.80 | 0.0 | 0.05 | 12.35 | 0.01 | 2.131 | 17.98 | 0.11 | 5.0 | 95.0 | 0.0 | -1.76 | 0.66 | 0.54 | — | 2.3 | 0.005 | 0.80 | 0.0 | 0.05 | 12.71 | 0.01 | 2.083 | 22.17 | 0.11 | 7.5 | 92.5 | 0.0 | -2.04 | 1.87 | 0.66 | 0.57 | — | 16064 | 2059 | 12 | 0 | 0 | 0 | 0 | logfile |
✔ | 6ZFo | 11184 | 2023-02-22 | 2020-06-17 | 4.4 | 4.43 | — | 4.4 | 0.003 | 0.55 | 0.0 | 0.04 | 10.40 | 0.00 | 2.157 | 3.58 | 1.30 | 4.5 | 95.5 | 0.0 | -0.66 | 0.49 | 0.51 | — | 4.4 | 0.003 | 0.62 | 0.0 | 0.04 | 11.48 | 0.00 | 1.947 | 12.09 | 0.00 | 6.6 | 93.4 | 0.0 | -1.08 | 1.58 | 0.52 | 0.57 | — | 18988 | 1252 | 8 | 0 | 2 | 0 | 9310 | logfile |
✔ | 7V4J | 31713 | 2023-02-19 | 2021-08-13 | 3.5 | 3.64 | — | 3.8 | 0.003 | 0.67 | 0.0 | 0.05 | 13.95 | 0.01 | 2.092 | 19.96 | 0.00 | 8.2 | 91.8 | 0.0 | -1.60 | 0.61 | 0.52 | 1.21 | 3.8 | 0.003 | 0.73 | 0.0 | 0.05 | 16.29 | 0.01 | 2.111 | 19.55 | 0.28 | 6.6 | 93.4 | 0.0 | -1.29 | 0.74 | 0.62 | 0.57 | 1.18 | 9850 | 1275 | 5 | 0 | 0 | 0 | 0 | logfile |
✔ | 7U12 | 26275 | 2023-02-17 | 2022-02-19 | 3.5 | 3.59 | — | 4.4 | 0.011 | 1.02 | 0.0 | 0.07 | 16.79 | 0.01 | 2.160 | 20.06 | 5.51 | 8.0 | 92.0 | 0.0 | -3.00 | 0.29 | 0.45 | 2.77 | 4.3 | 0.005 | 0.91 | 0.0 | 0.06 | 15.76 | 0.00 | 2.056 | 17.29 | 0.26 | 11.8 | 88.2 | 0.0 | -3.89 | 2.91 | 0.34 | 0.57 | 2.15 | 3456 | 405 | 6 | 0 | 12 | 0 | 0 | logfile |
✔ | 7NiU | 12365 | 2023-02-21 | 2021-02-14 | 4.2 | 3.68 | — | 3.5 | 0.008 | 1.01 | 0.0 | 0.05 | 15.90 | 0.01 | 2.110 | 34.12 | 1.67 | 14.7 | 85.0 | 0.2 | -5.18 | 0.57 | 0.58 | — | 3.5 | 0.003 | 0.69 | 0.0 | 0.04 | 14.73 | 0.00 | 2.133 | 14.44 | 0.18 | 5.9 | 94.1 | 0.0 | -1.65 | 1.64 | 0.57 | 0.57 | — | 15495 | 2015 | 6 | 0 | 2 | 0 | 0 | logfile |
✔ | 6G90 | 4364 | 2023-02-24 | 2018-04-10 | 4.0 | 4.12 | — | 3.9 | 0.009 | 1.30 | 2.0 | 0.07 | 12.73 | 0.03 | 1.687 | 18.99 | 0.57 | 7.8 | 91.4 | 0.8 | -3.55 | 0.51 | 0.41 | — | 3.9 | 0.003 | 0.90 | 0.0 | 0.04 | 15.20 | 0.01 | 2.102 | 17.67 | 0.21 | 7.5 | 92.2 | 0.3 | -0.80 | 3.85 | 0.58 | 0.57 | — | 65050 | 6796 | 43 | 474 | 223 | 0 | 0 | logfile |
✔ | 7ZPJ | 14855 | 2023-02-24 | 2022-04-27 | 3.81 | 3.24 | 3.86 | 6.5 | 0.004 | 0.86 | 0.0 | 0.05 | 13.19 | 0.01 | 2.159 | 2.94 | 0.67 | 3.3 | 96.7 | 0.0 | 0.22 | 0.54 | 0.33 | 0.15 | 2.1 | 0.004 | 0.69 | 0.0 | 0.04 | 15.40 | 0.01 | 1.881 | 14.65 | 0.75 | 4.9 | 95.1 | 0.0 | -0.12 | 1.51 | 0.64 | 0.57 | 0.39 | 23479 | 1355 | 3 | 55 | 0 | 0 | 11508 | logfile |
✔ | 6Q2N | 20575 | 2023-02-20 | 2019-08-08 | 4.4 | 4.43 | — | 4.3 | 0.008 | 1.24 | 0.0 | 0.06 | 9.78 | 0.01 | 1.449 | 11.01 | 0.68 | 9.6 | 90.2 | 0.2 | -4.25 | 0.60 | 0.56 | — | 4.3 | 0.004 | 0.81 | 0.0 | 0.05 | 11.58 | 0.01 | 2.192 | 17.37 | 0.00 | 9.9 | 90.1 | 0.0 | -2.55 | 0.96 | 0.61 | 0.58 | — | 13140 | 1678 | 8 | 0 | 8 | 0 | 0 | logfile |
✔ | 6ZD0 | 11172 | 2023-02-18 | 2020-06-13 | 4.6 | 4.62 | 2.80 | 3.7 | 0.004 | 0.91 | 0.0 | 0.05 | 7.55 | 0.00 | 2.207 | 10.05 | 0.00 | 10.1 | 89.8 | 0.1 | -4.73 | 0.59 | 0.58 | — | 4.5 | 0.003 | 0.78 | 0.0 | 0.04 | 5.38 | 0.00 | 2.341 | 5.89 | 0.00 | 15.0 | 84.6 | 0.4 | -4.68 | 2.32 | 0.61 | 0.58 | — | 7962 | 1611 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 6CRZ | 7577 | 2023-02-25 | 2018-03-19 | 3.3 | 3.42 | 3.35 | 4.5 | 0.007 | 0.96 | 0.0 | 0.06 | 9.21 | 0.01 | 2.254 | 6.77 | 0.04 | 7.8 | 92.2 | 0.0 | -4.10 | 0.39 | 0.17 | 0.01 | 3.4 | 0.007 | 1.08 | 0.0 | 0.06 | 13.63 | 0.01 | 2.021 | 20.82 | 0.54 | 9.3 | 90.5 | 0.1 | -2.67 | 1.61 | 0.61 | 0.58 | 0.77 | 25909 | 3205 | 25 | 0 | 66 | 0 | 0 | logfile |
✔ | 7BZX | 30262 | 2023-02-17 | 2020-04-28 | 4.0 | 4.19 | — | 3.2 | 0.019 | 2.22 | 9.0 | 0.12 | 8.56 | 0.01 | 2.485 | 2.40 | 0.00 | 6.6 | 92.1 | 1.3 | -2.90 | 0.47 | 0.25 | — | 2.8 | 0.006 | 1.18 | 0.0 | 0.05 | 9.20 | 0.01 | 2.035 | 27.91 | 0.00 | 24.1 | 75.8 | 0.1 | -4.93 | 2.97 | 0.75 | 0.58 | — | 5652 | 1154 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 7NCJ | 12268 | 2023-02-19 | 2021-01-28 | 4.23 | 3.11 | 3.97 | 4.5 | 0.011 | 1.60 | 2.0 | 0.10 | 13.68 | 0.01 | 2.444 | 0.18 | 0.76 | 7.7 | 92.0 | 0.3 | -2.36 | 0.65 | 0.46 | — | 4.5 | 0.003 | 0.60 | 1.0 | 0.05 | 13.98 | 0.00 | 1.897 | 13.84 | 0.00 | 11.2 | 88.8 | 0.0 | -2.88 | 1.39 | 0.69 | 0.58 | — | 10860 | 774 | 12 | 0 | 0 | 0 | 5586 | logfile |