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Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 7WiJ | 32531 | 2023-12-09 | 2022-01-03 | 3.17 | 3.08 | 3.01 | 3.2 | 0.002 | 0.50 | 0.0 | 0.03 | 14.49 | 0.00 | 2.243 | 4.52 | 0.00 | 0.4 | 99.6 | 0.0 | 2.75 | 0.70 | 0.85 | 1.82 | 3.2 | 0.003 | 0.53 | 0.0 | 0.03 | 15.57 | 0.00 | 2.262 | 4.68 | 0.00 | 0.8 | 99.2 | 0.0 | 3.40 | 0.26 | 0.71 | 0.87 | 1.79 | 12396 | 1602 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 7P13 | 13154 | 2023-12-10 | 2021-07-01 | 2.29 | 1.96 | 2.28 | 1.7 | 0.016 | 1.06 | 0.0 | 0.07 | 14.07 | 0.01 | 2.430 | 5.24 | 0.00 | 3.3 | 96.7 | 0.0 | 2.06 | 0.82 | 0.87 | 4.22 | 1.6 | 0.003 | 0.48 | 0.0 | 0.03 | 17.15 | 0.00 | 2.107 | 14.88 | 1.30 | 2.7 | 97.3 | 0.0 | 5.19 | 0.52 | 0.83 | 0.87 | 3.65 | 13727 | 1743 | 7 | 0 | 0 | 0 | 154 | logfile |
✔ | 7RX5 | 24725 | 2023-12-08 | 2021-08-21 | 3.4 | 3.65 | — | 3.6 | 0.002 | 0.25 | 0.0 | 0.03 | 11.98 | 0.00 | 2.288 | 5.05 | 0.00 | 0.0 | 100.0 | 0.0 | 4.54 | 0.70 | 0.85 | 3.58 | 3.6 | 0.003 | 0.35 | 0.0 | 0.03 | 13.46 | 0.00 | 2.257 | 6.36 | 0.00 | 0.0 | 100.0 | 0.0 | 5.01 | 0.27 | 0.71 | 0.88 | 2.75 | 9120 | 1160 | 40 | 0 | 0 | 0 | 0 | logfile |
✔ | 6TMi | 10522 | 2023-12-09 | 2019-12-04 | 3.5 | 3.96 | 3.49 | 3.8 | 0.006 | 0.64 | 0.0 | 0.04 | 16.16 | 0.01 | 2.113 | 9.16 | 0.58 | 10.0 | 90.0 | 0.0 | -4.41 | 0.53 | 0.77 | 1.38 | 3.8 | 0.003 | 0.63 | 0.0 | 0.03 | 17.26 | 0.00 | 2.061 | 9.99 | 0.19 | 7.6 | 92.4 | 0.0 | 0.66 | 1.47 | 0.53 | 0.80 | 1.65 | 9606 | 605 | 5 | 0 | 0 | 0 | 4842 | logfile |
✔ | 8BF8 | 16016 | 2023-12-07 | 2022-10-24 | 2.8 | 3.14 | 2.80 | 3.1 | 0.003 | 0.47 | 0.0 | 0.03 | 20.52 | 0.00 | 2.203 | 8.73 | 0.93 | 2.7 | 97.3 | 0.0 | 0.92 | 0.64 | 0.76 | 2.97 | 3.1 | 0.003 | 0.56 | 0.0 | 0.03 | 20.84 | 0.00 | 2.088 | 9.59 | 4.19 | 3.8 | 96.2 | 0.0 | 0.55 | 0.88 | 0.59 | 0.75 | 2.94 | 4686 | 302 | 2 | 111 | 0 | 0 | 0 | logfile |
✔ | 8EX9 | 28655 | 2023-12-07 | 2022-10-25 | 2.96 | 3.27 | 3.00 | 3.2 | 0.003 | 0.49 | 0.0 | 0.03 | 23.30 | 0.00 | 2.200 | 13.65 | 0.79 | 4.3 | 95.7 | 0.0 | -1.52 | 0.60 | 0.71 | 4.83 | 3.2 | 0.003 | 0.55 | 0.0 | 0.03 | 23.18 | 0.00 | 2.191 | 14.51 | 3.17 | 4.9 | 95.1 | 0.0 | -0.44 | 0.27 | 0.62 | 0.73 | 4.29 | 4199 | 166 | 4 | 139 | 0 | 0 | 0 | logfile |
✔ | 8A8J | 15231 | 2023-12-08 | 2022-06-23 | 3.1 | 3.35 | 3.16 | 3.3 | 0.005 | 0.71 | 0.0 | 0.04 | 19.60 | 0.00 | 2.009 | 4.14 | 0.19 | 4.4 | 95.6 | 0.0 | 0.13 | 0.72 | 0.84 | 3.07 | 3.3 | 0.002 | 0.50 | 0.0 | 0.03 | 19.78 | 0.00 | 2.052 | 3.98 | 0.19 | 2.9 | 97.1 | 0.0 | 0.77 | 0.91 | 0.70 | 0.84 | 2.74 | 6159 | 682 | 6 | 38 | 4 | 0 | 0 | logfile |
✔ | 7Q65 | 13852 | 2023-12-08 | 2021-11-05 | 3.32 | 2.96 | 3.26 | 3.3 | 0.016 | 1.56 | 0.0 | 0.10 | 10.10 | 0.01 | 2.159 | 3.45 | 8.33 | 10.5 | 89.5 | 0.0 | -5.74 | 0.64 | 0.85 | 4.16 | 3.3 | 0.003 | 0.65 | 0.0 | 0.03 | 13.00 | 0.00 | 2.080 | 12.96 | 1.06 | 7.7 | 92.3 | 0.0 | -5.20 | 0.70 | 0.57 | 0.83 | 4.09 | 6204 | 880 | 22 | 0 | 0 | 0 | 0 | logfile |
✔ | 3J89 | 6123 | 2023-12-08 | 2014-10-07 | 3.6 | 2.21 | — | 3.5 | 0.022 | 1.64 | 0.0 | 0.10 | 11.97 | 0.01 | 2.578 | 2.11 | 0.00 | 3.5 | 96.5 | 0.0 | -0.96 | 0.83 | 0.81 | 0.77 | 3.2 | 0.004 | 0.53 | 0.0 | 0.03 | 20.53 | 0.00 | 2.099 | 9.53 | 1.50 | 1.4 | 98.6 | 0.0 | 2.80 | 1.98 | 0.81 | 0.79 | 0.39 | 9025 | 551 | 19 | 0 | 0 | 0 | 4598 | logfile |
✔ | 6XMF | 22257 | 2023-12-08 | 2020-06-30 | 3.1 | 3.28 | — | 3.3 | 0.002 | 0.56 | 0.0 | 0.03 | 20.61 | 0.00 | 2.246 | 8.60 | 0.00 | 6.8 | 93.2 | 0.0 | -1.78 | 0.68 | 0.71 | 2.25 | 3.2 | 0.003 | 0.60 | 0.0 | 0.03 | 21.22 | 0.00 | 2.154 | 15.41 | 0.60 | 9.1 | 90.9 | 0.0 | -0.47 | 0.47 | 0.71 | 0.76 | 2.75 | 7382 | 627 | 3 | 109 | 1 | 0 | 0 | logfile |
✔ | 7ABK | 11698 | 2023-12-07 | 2020-09-07 | 3.6 | 4.10 | 3.49 | 3.9 | 0.004 | 0.66 | 0.0 | 0.04 | 16.30 | 0.00 | 2.315 | 5.67 | 1.23 | 1.5 | 98.5 | 0.0 | 0.91 | 0.28 | 0.87 | 1.10 | 3.9 | 0.004 | 0.67 | 0.0 | 0.03 | 19.79 | 0.00 | 2.278 | 6.30 | 2.47 | 2.1 | 97.9 | 0.0 | 4.42 | 1.32 | 0.28 | 0.86 | 1.35 | 1574 | 196 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 8ooS | 17027 | 2023-12-09 | 2023-04-05 | 3.29 | 1.76 | 3.20 | 3.1 | 0.007 | 1.29 | 0.0 | 0.05 | 24.79 | 0.01 | 1.879 | 4.57 | 0.00 | 3.2 | 96.8 | 0.0 | -2.38 | 0.71 | 0.73 | 2.66 | 3.1 | 0.003 | 0.77 | 0.0 | 0.03 | 25.38 | 0.00 | 1.955 | 10.06 | 0.00 | 3.1 | 96.9 | 0.0 | 1.04 | 1.60 | 0.74 | 0.74 | 1.36 | 12307 | 966 | 10 | 217 | 3 | 0 | 0 | logfile |
✔ | 8J7R | 36046 | 2023-12-07 | 2023-04-28 | 3.7 | 3.03 | 3.63 | 3.4 | 0.010 | 1.34 | 0.0 | 0.13 | 23.75 | 0.00 | 2.220 | 9.29 | 6.85 | 2.5 | 97.5 | 0.0 | -0.13 | 0.69 | 0.76 | 0.98 | 3.0 | 0.002 | 0.53 | 0.0 | 0.03 | 22.13 | 0.00 | 2.261 | 9.86 | 0.46 | 2.1 | 97.9 | 0.0 | 3.05 | 1.41 | 0.72 | 0.80 | 1.07 | 4034 | 238 | 2 | 97 | 3 | 1 | 0 | logfile |
✔ | 7X3X | 32996 | 2023-12-09 | 2022-03-01 | 3.2 | 3.69 | — | 3.2 | 0.012 | 0.98 | 0.0 | 0.06 | 27.92 | 0.01 | 1.947 | 10.45 | 0.16 | 0.9 | 99.1 | 0.0 | 2.89 | 0.81 | 0.65 | 2.39 | 3.2 | 0.004 | 0.58 | 0.0 | 0.03 | 27.76 | 0.00 | 2.153 | 6.94 | 0.32 | 1.6 | 98.4 | 0.0 | 3.39 | 1.76 | 0.90 | 0.88 | 2.01 | 12036 | 769 | 11 | 292 | 0 | 0 | 0 | logfile |
✔ | 6XZC | 10658 | 2023-12-10 | 2020-02-03 | 3.37 | 3.56 | 3.37 | 3.6 | 0.004 | 0.63 | 0.0 | 0.04 | 12.50 | 0.01 | 2.323 | 2.10 | 3.06 | 1.7 | 98.3 | 0.0 | -1.92 | 0.66 | 0.74 | 0.86 | 3.6 | 0.002 | 0.54 | 0.0 | 0.03 | 15.13 | 0.00 | 2.208 | 5.54 | 0.22 | 0.5 | 99.5 | 0.0 | 5.22 | 1.10 | 0.72 | 0.84 | 0.90 | 13279 | 1694 | 7 | 0 | 0 | 0 | 0 | logfile |
✔ | 8EYQ | 28692 | 2023-12-09 | 2022-10-28 | 3.3 | 3.53 | 3.35 | 3.3 | 0.005 | 0.82 | 0.0 | 0.05 | 22.23 | 0.01 | 1.460 | 13.80 | 1.29 | 6.9 | 92.5 | 0.6 | -2.06 | 0.87 | 0.78 | 1.33 | 3.3 | 0.004 | 0.62 | 0.0 | 0.03 | 22.00 | 0.00 | 2.081 | 10.08 | 0.43 | 4.6 | 95.3 | 0.1 | -0.48 | 1.59 | 0.91 | 0.88 | 1.92 | 48190 | 1965 | 18 | 1525 | 0 | 0 | 0 | logfile |
✔ | 8PEP | 17634 | 2023-12-10 | 2023-06-14 | 3.33 | 4.07 | 3.32 | 3.4 | 0.004 | 0.72 | 0.0 | 0.05 | 28.76 | 0.01 | 2.092 | 9.54 | 0.13 | 1.9 | 98.1 | 0.0 | 0.85 | 0.92 | 0.87 | 1.55 | 3.4 | 0.004 | 0.61 | 0.0 | 0.03 | 27.44 | 0.00 | 2.090 | 10.60 | 0.38 | 3.2 | 96.8 | 0.0 | 1.58 | 2.45 | 0.95 | 0.91 | 1.35 | 13492 | 939 | 12 | 294 | 0 | 0 | 0 | logfile |
✔ | 8HR1 | 34956 | 2023-12-09 | 2022-12-14 | 3.02 | 2.38 | 2.94 | 3.0 | 0.010 | 0.80 | 0.0 | 0.05 | 26.09 | 0.01 | 2.255 | 8.44 | 0.16 | 3.1 | 96.9 | 0.0 | -5.09 | 0.84 | 0.81 | 2.82 | 2.9 | 0.004 | 0.61 | 0.0 | 0.03 | 28.05 | 0.00 | 2.135 | 10.82 | 0.16 | 3.2 | 96.8 | 0.0 | 1.87 | 1.26 | 0.90 | 0.89 | 1.55 | 12110 | 765 | 11 | 294 | 0 | 0 | 0 | logfile |
✔ | 8CXM | 27060 | 2023-12-08 | 2022-05-21 | 3.21 | 3.69 | 3.21 | 3.6 | 0.003 | 0.50 | 0.0 | 0.03 | 14.84 | 0.00 | 2.093 | 8.38 | 0.06 | 4.1 | 95.9 | 0.0 | 3.68 | 0.56 | 0.87 | 1.34 | 3.5 | 0.003 | 0.53 | 0.0 | 0.03 | 16.26 | 0.00 | 2.108 | 6.36 | 0.15 | 3.9 | 96.1 | 0.0 | 4.62 | 1.14 | 0.58 | 0.89 | 1.41 | 109560 | 14685 | 55 | 0 | 0 | 0 | 0 | logfile |
✔ | 7ZJ2 | 14739 | 2023-12-07 | 2022-04-08 | 3.32 | 3.56 | — | 3.6 | 0.014 | 2.21 | 0.0 | 0.08 | 15.29 | 0.01 | 2.548 | 0.00 | 0.00 | 2.3 | 97.7 | 0.0 | -3.75 | 0.47 | 0.78 | 4.64 | 3.6 | 0.005 | 0.75 | 0.0 | 0.03 | 16.47 | 0.00 | 2.160 | 16.93 | 0.57 | 3.1 | 96.9 | 0.0 | -3.55 | 3.51 | 0.44 | 0.74 | 4.77 | 3792 | 540 | 12 | 0 | 0 | 0 | 0 | logfile |