The table shows a selection of parameters. Activate more columns using
the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 7NZM | 12665 | 2023-07-05 | 2021-03-24 | 3.96 | 6.56 | 4.22 | 4.2 | 0.007 | 1.12 | 0.0 | 0.06 | 13.94 | 0.01 | 1.774 | 11.10 | 0.00 | 3.8 | 96.2 | 0.0 | -1.56 | 0.77 | 0.51 | -0.04 | 4.3 | 0.003 | 0.74 | 0.0 | 0.04 | 15.04 | 0.00 | 2.061 | 18.47 | 0.21 | 2.9 | 97.1 | 0.0 | 0.28 | 1.50 | 0.94 | 0.84 | 0.28 | 9109 | 1157 | 8 | 0 | 4 | 0 | 0 | logfile |
✔ | 6RED | 4850 | 2023-07-15 | 2019-04-12 | 3.0 | 3.22 | 3.14 | 27.0 | 0.012 | 1.04 | 0.0 | 0.06 | 14.48 | 0.01 | 2.140 | 5.83 | 0.31 | 4.7 | 95.2 | 0.1 | -3.86 | 0.16 | 0.02 | 0.19 | 27.0 | 0.004 | 0.80 | 0.0 | 0.05 | 15.95 | 0.00 | 1.867 | 19.50 | 2.41 | 5.4 | 94.5 | 0.1 | -0.98 | 1.03 | 0.25 | 0.16 | 0.28 | 33899 | 4503 | 25 | 0 | 10 | 0 | 0 | logfile |
✔ | 6RAX | 4786 | 2023-07-18 | 2019-04-08 | 3.99 | 4.07 | 3.97 | 4.1 | 0.011 | 1.46 | 27.0 | 0.13 | 18.03 | 0.01 | 1.308 | 23.93 | 6.70 | 19.2 | 80.3 | 0.5 | -5.61 | 0.55 | 0.58 | 0.25 | 4.0 | 0.003 | 0.82 | 0.0 | 0.04 | 18.22 | 0.00 | 2.143 | 13.30 | 0.36 | 10.1 | 89.8 | 0.0 | -2.87 | 1.49 | 0.56 | 0.53 | 0.28 | 40970 | 5062 | 19 | 29 | 6 | 0 | 0 | logfile |
✔ | 7KNi | 22950 | 2023-07-17 | 2020-11-04 | 3.91 | 4.86 | 4.14 | 3.9 | 0.004 | 0.64 | 0.0 | 0.05 | 14.42 | 0.01 | 2.045 | 4.23 | 0.07 | 4.4 | 95.6 | 0.0 | -1.75 | 0.77 | 0.56 | 0.26 | 4.0 | 0.003 | 0.66 | 0.0 | 0.05 | 16.07 | 0.00 | 2.090 | 18.08 | 0.31 | 5.3 | 94.7 | 0.0 | -1.03 | 1.46 | 0.84 | 0.74 | 0.28 | 39574 | 4878 | 18 | 0 | 68 | 0 | 0 | logfile |
✔ | 7RTV | 24690 | 2023-07-03 | 2021-08-15 | 3.96 | 4.06 | — | 4.1 | 0.004 | 0.76 | 0.0 | 0.05 | 14.21 | 0.00 | 2.207 | 14.04 | 0.32 | 2.8 | 97.2 | 0.0 | 3.61 | 0.41 | 0.63 | 0.10 | 4.1 | 0.004 | 0.91 | 0.0 | 0.04 | 16.58 | 0.00 | 2.168 | 18.02 | 0.32 | 3.3 | 96.7 | 0.0 | 2.73 | 1.76 | 0.41 | 0.64 | 0.28 | 2881 | 366 | 3 | 0 | 6 | 0 | 0 | logfile |
✔ | 7oPE | 13017 | 2023-07-16 | 2021-05-31 | 3.2 | 5.30 | 3.21 | 5.0 | 0.011 | 1.04 | 2.0 | 0.06 | 15.48 | 0.01 | 1.028 | 4.81 | 0.23 | 8.2 | 91.6 | 0.2 | -3.62 | 0.89 | 0.72 | -0.03 | 5.0 | 0.004 | 0.76 | 0.0 | 0.04 | 17.44 | 0.01 | 2.017 | 29.39 | 0.93 | 7.9 | 92.0 | 0.1 | -1.69 | 1.82 | 0.93 | 0.87 | 0.28 | 93862 | 3818 | 33 | 2996 | 0 | 0 | 0 | logfile |
✔ | 6AHR | 9626 | 2023-07-13 | 2018-08-20 | 3.92 | 4.05 | — | 3.9 | 0.004 | 0.96 | 0.0 | 0.05 | 12.84 | 0.01 | 1.742 | 9.87 | 0.13 | 10.2 | 89.6 | 0.3 | -4.23 | 0.71 | 0.61 | 0.54 | 3.9 | 0.005 | 0.87 | 0.0 | 0.04 | 16.28 | 0.01 | 2.063 | 22.59 | 0.79 | 12.1 | 87.8 | 0.1 | -2.17 | 2.79 | 0.78 | 0.76 | 0.28 | 27851 | 2595 | 13 | 341 | 1 | 0 | 0 | logfile |
✔ | 7AS9 | 11890 | 2023-07-16 | 2020-10-27 | 3.5 | 4.52 | 3.51 | 4.2 | 0.007 | 0.98 | 0.0 | 0.05 | 17.12 | 0.01 | 1.976 | 8.25 | 0.07 | 13.0 | 86.6 | 0.4 | -4.86 | 0.92 | 0.83 | 0.18 | 4.2 | 0.006 | 0.86 | 1.0 | 0.04 | 18.38 | 0.01 | 2.021 | 38.30 | 0.99 | 12.9 | 87.0 | 0.1 | -3.02 | 0.73 | 0.92 | 0.84 | 0.28 | 93137 | 3720 | 32 | 2999 | 0 | 0 | 0 | logfile |
✔ | 7WTA | 32773 | 2023-07-10 | 2022-02-04 | 3.9 | 6.12 | — | 3.5 | 0.008 | 0.82 | 0.0 | 0.04 | 13.23 | 0.00 | 2.171 | 19.58 | 0.00 | 8.2 | 91.8 | 0.0 | -0.51 | 0.89 | 0.81 | 0.46 | 3.5 | 0.004 | 0.78 | 0.0 | 0.04 | 14.73 | 0.00 | 2.043 | 25.61 | 0.27 | 9.2 | 90.7 | 0.1 | -0.75 | 0.46 | 0.90 | 0.82 | 0.29 | 21080 | 2736 | 8 | 0 | 4 | 0 | 0 | logfile |
✔ | 8FCQ | 28990 | 2023-07-17 | 2022-12-01 | 3.93 | 4.35 | 4.09 | 4.2 | 0.011 | 0.85 | 0.0 | 0.06 | 12.29 | 0.00 | 2.387 | 1.15 | 0.03 | 1.7 | 98.2 | 0.1 | 0.31 | 0.69 | 0.55 | 0.57 | 4.2 | 0.003 | 0.85 | 0.0 | 0.05 | 15.64 | 0.00 | 2.071 | 16.80 | 0.28 | 2.6 | 97.4 | 0.0 | 0.62 | 1.18 | 0.81 | 0.79 | 0.30 | 36904 | 4667 | 13 | 0 | 12 | 0 | 0 | logfile |
✔ | 7o7R | 12754 | 2023-07-18 | 2021-04-13 | 3.9 | 4.51 | — | 4.3 | 0.013 | 1.33 | 8.0 | 0.07 | 16.35 | 0.01 | 1.912 | 20.97 | 1.07 | 18.3 | 81.4 | 0.3 | -5.78 | 0.83 | 0.75 | 0.13 | 4.3 | 0.005 | 1.01 | 0.0 | 0.05 | 17.36 | 0.01 | 1.920 | 31.74 | 0.67 | 12.7 | 87.2 | 0.1 | -3.70 | 0.87 | 0.84 | 0.77 | 0.30 | 40530 | 5126 | 16 | 0 | 40 | 0 | 0 | logfile |
✔ | 6XWQ | 10635 | 2023-07-05 | 2020-01-24 | 3.41 | 4.27 | — | 4.0 | 0.003 | 0.61 | 0.0 | 0.04 | 13.42 | 0.00 | 2.171 | 10.53 | 0.00 | 3.5 | 96.2 | 0.2 | -2.80 | 0.73 | 0.80 | 0.22 | 4.0 | 0.003 | 0.80 | 0.0 | 0.04 | 15.44 | 0.00 | 2.167 | 14.27 | 0.30 | 3.8 | 96.2 | 0.0 | 1.16 | 1.16 | 0.72 | 0.84 | 0.30 | 9572 | 1281 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 5U4i | 8505 | 2023-07-25 | 2016-12-04 | 3.5 | 3.09 | 3.83 | 3.7 | 0.007 | 1.17 | 41.0 | 0.10 | 18.54 | 0.02 | 1.386 | 8.56 | 8.19 | 6.4 | 92.7 | 0.8 | -1.32 | 0.60 | 0.74 | 0.22 | 3.0 | 0.005 | 0.80 | 0.0 | 0.04 | 18.66 | 0.01 | 1.670 | 32.60 | 1.29 | 7.3 | 92.6 | 0.1 | -1.91 | 1.50 | 0.63 | 0.74 | 0.31 | 149495 | 6159 | 61 | 4715 | 125 | 0 | 0 | logfile |
✔ | 7UNK | 26625 | 2023-07-07 | 2022-04-11 | 3.45 | 3.69 | 3.50 | 3.6 | 0.003 | 0.66 | 0.0 | 0.04 | 15.44 | 0.01 | 2.169 | 7.74 | 0.75 | 3.0 | 97.0 | 0.0 | 1.09 | 0.72 | 0.83 | 0.68 | 3.6 | 0.003 | 0.63 | 0.0 | 0.04 | 16.91 | 0.00 | 2.175 | 8.87 | 0.42 | 2.9 | 97.1 | 0.0 | 1.47 | 0.49 | 0.76 | 0.88 | 0.31 | 10992 | 1401 | 4 | 0 | 0 | 0 | 0 | logfile |
✔ | 7RYE | 24735 | 2023-07-09 | 2021-08-25 | 3.9 | 4.10 | — | 4.0 | 0.003 | 0.65 | 0.0 | 0.04 | 14.57 | 0.00 | 2.090 | 14.13 | 0.00 | 3.7 | 96.3 | 0.0 | 1.07 | 0.76 | 0.69 | -0.18 | 4.0 | 0.004 | 0.75 | 0.0 | 0.04 | 17.66 | 0.00 | 2.049 | 16.16 | 0.42 | 4.3 | 95.7 | 0.0 | 1.29 | 1.09 | 0.81 | 0.79 | 0.32 | 19708 | 2535 | 24 | 0 | 0 | 0 | 0 | logfile |
✔ | 7QPG | 14120 | 2023-07-04 | 2022-01-04 | 3.9 | 4.08 | — | 2.8 | 0.002 | 0.54 | 0.0 | 0.04 | 10.05 | 0.00 | 2.093 | 6.89 | 0.00 | 2.7 | 97.3 | 0.0 | 0.34 | 0.78 | 0.58 | 0.22 | 2.3 | 0.003 | 0.67 | 0.0 | 0.04 | 13.10 | 0.00 | 2.137 | 11.18 | 0.11 | 3.0 | 97.0 | 0.0 | 1.12 | 0.84 | 0.88 | 0.76 | 0.33 | 57164 | 7156 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 6MDo | 9102 | 2023-07-19 | 2018-09-04 | 3.9 | 5.46 | — | 4.2 | 0.015 | 1.44 | 0.0 | 0.12 | 13.30 | 0.01 | 2.012 | 6.72 | 0.16 | 0.3 | 99.6 | 0.0 | -3.28 | 0.79 | 0.68 | 0.38 | 4.2 | 0.003 | 0.66 | 0.0 | 0.08 | 13.80 | 0.00 | 1.783 | 15.25 | 0.21 | 5.9 | 94.1 | 0.0 | -0.92 | 1.53 | 0.87 | 0.84 | 0.34 | 45373 | 2843 | 13 | 0 | 11 | 0 | 22858 | logfile |
✔ | 5L4K | 4002 | 2023-07-13 | 2016-05-25 | 3.9 | 4.00 | — | 4.2 | 0.007 | 0.85 | 3.0 | 0.05 | 16.12 | 0.01 | 1.808 | 5.03 | 3.82 | 11.8 | 85.0 | 3.2 | -6.15 | 0.34 | 0.64 | 0.39 | 4.0 | 0.004 | 0.79 | 0.0 | 0.04 | 17.43 | 0.01 | 1.906 | 18.52 | 0.60 | 9.2 | 90.4 | 0.5 | -1.87 | 1.81 | 0.37 | 0.70 | 0.35 | 79649 | 5000 | 12 | 0 | 0 | 0 | 39990 | logfile |
✔ | 6Y7C | 10713 | 2023-07-13 | 2020-02-28 | 3.8 | 5.42 | 3.84 | 2.8 | 0.015 | 1.44 | 1.0 | 0.06 | 18.67 | 0.02 | 0.193 | 10.34 | 1.00 | 14.3 | 85.4 | 0.3 | -5.44 | 0.89 | 0.71 | 0.41 | 2.6 | 0.013 | 0.93 | 0.0 | 0.04 | 18.90 | 0.01 | 1.977 | 36.16 | 0.35 | 15.8 | 84.1 | 0.1 | -3.77 | 2.58 | 0.92 | 0.79 | 0.35 | 79690 | 5381 | 34 | 1735 | 0 | 0 | 0 | logfile |
✔ | 7FG3 | 31577 | 2023-07-05 | 2021-07-25 | 3.9 | 3.62 | — | 4.0 | 0.006 | 1.13 | 0.0 | 0.06 | 14.47 | 0.01 | 1.929 | 37.29 | 0.00 | 18.5 | 80.8 | 0.7 | -4.60 | 0.22 | 0.47 | -0.27 | 4.0 | 0.004 | 0.92 | 0.0 | 0.05 | 16.64 | 0.01 | 2.088 | 24.71 | 0.10 | 15.3 | 84.1 | 0.5 | -3.68 | 0.78 | 0.23 | 0.45 | 0.35 | 9054 | 1166 | 2 | 0 | 0 | 0 | 0 | logfile |