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Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 6oo2 | 20142 | 2024-03-17 | 2019-04-22 | 4.4 | 4.52 | — | 3.5 | 0.007 | 1.14 | 1.0 | 0.07 | 13.96 | 0.01 | 2.037 | 7.03 | 0.00 | 7.1 | 92.3 | 0.6 | -3.55 | 0.75 | 0.61 | — | 2.5 | 0.002 | 0.67 | 0.0 | 0.04 | 12.97 | 0.00 | 0.988 | 11.14 | 0.00 | 3.8 | 96.2 | 0.0 | 1.86 | 1.01 | 0.86 | 0.80 | — | 16691 | 2436 | 24 | 0 | 19 | 0 | 0 | logfile |
✔ | 6CNF | 7533 | 2024-03-25 | 2018-03-08 | 4.5 | 4.70 | — | 4.4 | 0.006 | 1.16 | 9.0 | 0.06 | 14.03 | 0.01 | 1.905 | 40.19 | 0.74 | 17.9 | 80.5 | 1.6 | -5.23 | 0.74 | 0.65 | — | 4.4 | 0.004 | 0.87 | 0.0 | 0.05 | 15.29 | 0.01 | 2.044 | 24.57 | 0.00 | 12.7 | 86.3 | 1.0 | -2.70 | 1.47 | 0.85 | 0.81 | — | 47675 | 5695 | 27 | 104 | 69 | 0 | 0 | logfile |
✔ | 7JG7 | 22313 | 2024-03-18 | 2020-07-18 | 3.5 | 2.41 | 3.57 | 3.4 | 0.008 | 1.54 | 0.0 | 0.00 | 6.82 | 0.01 | 2.433 | 0.00 | 0.00 | 2.9 | 96.9 | 0.1 | -0.73 | 0.63 | 0.55 | — | 2.3 | 0.006 | 1.16 | 0.0 | 0.00 | 7.34 | 0.01 | 2.119 | 4.50 | 0.00 | 14.7 | 85.1 | 0.1 | -2.00 | 1.65 | 0.74 | 0.72 | — | 19316 | 4818 | 20 | 0 | 11 | 0 | 0 | logfile |
✔ | 6MZC | 9298 | 2024-03-18 | 2018-11-05 | 4.5 | 4.36 | 4.48 | 4.3 | 0.010 | 1.33 | 1.0 | 0.07 | 10.66 | 0.01 | 2.207 | 12.14 | 0.72 | 14.4 | 85.4 | 0.2 | -4.53 | 0.75 | 0.74 | — | 4.3 | 0.004 | 0.90 | 0.0 | 0.05 | 12.84 | 0.01 | 2.066 | 21.88 | 0.00 | 12.2 | 87.8 | 0.0 | -2.15 | 1.06 | 0.75 | 0.74 | — | 21254 | 2493 | 10 | 0 | 346 | 0 | 0 | logfile |
✔ | 7T54 | 25694 | 2024-03-11 | 2021-12-11 | 4.5 | 7.46 | 4.54 | 4.6 | 0.004 | 0.70 | 1.0 | 0.05 | 12.14 | 0.00 | 2.078 | 8.94 | 0.68 | 4.4 | 95.5 | 0.1 | 0.70 | 0.62 | 0.64 | — | 4.6 | 0.005 | 0.76 | 0.0 | 0.04 | 11.83 | 0.00 | 2.157 | 21.30 | 0.00 | 9.5 | 90.2 | 0.3 | -0.60 | 1.62 | 0.70 | 0.81 | — | 8552 | 1416 | 4 | 0 | 2 | 0 | 0 | logfile |
✔ | 7T55 | 25695 | 2024-03-15 | 2021-12-11 | 4.1 | 4.86 | 4.16 | 4.3 | 0.004 | 0.71 | 0.0 | 0.04 | 13.63 | 0.00 | 1.743 | 14.08 | 0.24 | 2.9 | 97.0 | 0.1 | 0.26 | 0.75 | 0.76 | — | 4.3 | 0.003 | 0.60 | 0.0 | 0.04 | 13.22 | 0.00 | 1.905 | 12.67 | 0.00 | 3.0 | 97.0 | 0.0 | 1.51 | 1.27 | 0.79 | 0.85 | — | 11460 | 1464 | 6 | 0 | 4 | 0 | 0 | logfile |
✔ | 7MDM | 23775 | 2024-03-22 | 2021-04-05 | 4.86 | 5.09 | — | 5.0 | 0.005 | 1.19 | 0.0 | 0.07 | 15.37 | 0.01 | 2.261 | 9.38 | 0.03 | 7.9 | 92.1 | 0.0 | -3.53 | 0.82 | 0.77 | — | 4.9 | 0.003 | 0.83 | 0.0 | 0.05 | 14.47 | 0.01 | 2.060 | 25.30 | 0.00 | 8.6 | 91.4 | 0.0 | -1.85 | 2.40 | 0.83 | 0.79 | — | 31986 | 4051 | 12 | 0 | 6 | 0 | 0 | logfile |
✔ | 7S63 | 24848 | 2024-03-25 | 2021-09-13 | 4.12 | 4.34 | 4.10 | 4.3 | 0.004 | 0.79 | 0.0 | 0.05 | 18.50 | 0.01 | 1.697 | 13.70 | 0.00 | 9.8 | 90.0 | 0.2 | -1.90 | 0.71 | 0.67 | — | 4.3 | 0.004 | 0.73 | 0.0 | 0.05 | 14.71 | 0.01 | 2.151 | 13.53 | 0.00 | 11.0 | 88.9 | 0.2 | -1.75 | 1.55 | 0.73 | 0.69 | — | 45208 | 5680 | 8 | 0 | 68 | 0 | 0 | logfile |
✔ | 5KEL | 8240 | 2024-03-17 | 2016-06-09 | 4.3 | 4.47 | — | 4.3 | 0.015 | 1.82 | 0.0 | 0.10 | 14.92 | 0.01 | 1.763 | 12.56 | 0.45 | 3.4 | 95.3 | 1.3 | 1.64 | 0.78 | 0.75 | — | 4.3 | 0.005 | 0.88 | 0.0 | 0.05 | 13.11 | 0.01 | 1.973 | 21.97 | 0.00 | 8.3 | 91.3 | 0.5 | -1.03 | 1.05 | 0.80 | 0.81 | — | 19278 | 2409 | 33 | 0 | 45 | 0 | 0 | logfile |
✔ | 7KXY | 23067 | 2024-03-14 | 2020-12-05 | 4.4 | 4.55 | 4.44 | 4.5 | 0.004 | 0.82 | 0.0 | 0.05 | 15.13 | 0.01 | 2.197 | 19.28 | 7.18 | 26.0 | 69.8 | 4.2 | -5.90 | 0.63 | 0.60 | — | 4.5 | 0.004 | 0.83 | 0.0 | 0.05 | 14.57 | 0.01 | 2.058 | 24.98 | 0.00 | 17.3 | 82.7 | 0.1 | -4.74 | 0.61 | 0.63 | 0.61 | — | 9510 | 1181 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 7WGZ | 32493 | 2024-03-18 | 2021-12-29 | 4.5 | 5.31 | — | 4.5 | 0.007 | 0.71 | 0.0 | 0.05 | 15.46 | 0.00 | 1.262 | 7.93 | 0.04 | 5.2 | 94.7 | 0.1 | -0.64 | 0.84 | 0.79 | — | 4.5 | 0.003 | 0.58 | 0.0 | 0.04 | 12.95 | 0.00 | 2.125 | 13.11 | 0.00 | 5.7 | 94.2 | 0.1 | -0.10 | 0.47 | 0.86 | 0.83 | — | 21920 | 2879 | 11 | 0 | 25 | 0 | 0 | logfile |
✔ | 7UY8 | 26867 | 2024-03-14 | 2022-05-06 | 4.5 | 8.56 | 4.38 | 4.2 | 0.003 | 0.63 | 1.0 | 0.05 | 14.55 | 0.00 | 2.207 | 8.69 | 0.00 | 6.1 | 93.9 | 0.0 | -0.66 | 0.79 | 0.60 | — | 4.4 | 0.003 | 0.64 | 0.0 | 0.04 | 14.41 | 0.00 | 2.222 | 15.98 | 0.00 | 4.8 | 95.1 | 0.1 | -0.31 | 1.40 | 0.92 | 0.85 | — | 9552 | 1161 | 5 | 0 | 1 | 0 | 0 | logfile |
✔ | 6Q2J | 20572 | 2024-03-16 | 2019-08-08 | 4.1 | 4.32 | — | 4.1 | 0.006 | 0.98 | 0.0 | 0.06 | 9.00 | 0.01 | 1.677 | 4.24 | 0.13 | 5.0 | 94.8 | 0.1 | -3.22 | 0.52 | 0.28 | — | 4.2 | 0.003 | 0.79 | 0.0 | 0.05 | 12.13 | 0.00 | 2.192 | 13.35 | 0.00 | 6.3 | 93.7 | 0.0 | -1.78 | 2.42 | 0.69 | 0.61 | — | 13796 | 1738 | 8 | 0 | 22 | 0 | 0 | logfile |
✔ | 7MDo | 23776 | 2024-03-19 | 2021-04-05 | 4.12 | 4.28 | — | 4.2 | 0.005 | 1.06 | 0.0 | 0.06 | 15.75 | 0.01 | 2.283 | 6.87 | 0.00 | 6.7 | 93.3 | 0.0 | -3.01 | 0.75 | 0.75 | — | 4.2 | 0.003 | 0.74 | 0.0 | 0.05 | 14.94 | 0.00 | 2.086 | 20.49 | 0.00 | 7.0 | 93.0 | 0.0 | -0.54 | 0.93 | 0.76 | 0.76 | — | 25098 | 3186 | 12 | 0 | 6 | 0 | 0 | logfile |
✔ | 7PTL | 13630 | 2024-03-19 | 2021-09-27 | 4.9 | 10.06 | 4.95 | — | 0.005 | 1.01 | 0.0 | 0.06 | 23.55 | 0.01 | 2.401 | 0.61 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.88 | 0.79 | — | — | 0.007 | 0.87 | 0.0 | 0.04 | 27.76 | 0.01 | 1.723 | 81.11 | 0.00 | 0.0 | 0.0 | 0.0 | — | 3.51 | 0.92 | 0.92 | — | 23080 | 0 | 1 | 720 | 0 | 0 | 7743 | logfile |
✔ | 6JPQ | 9870 | 2024-03-20 | 2019-03-27 | 4.44 | 5.93 | — | 7.2 | 0.006 | 1.13 | 0.0 | 0.06 | 12.18 | 0.01 | 2.195 | 10.45 | 0.57 | 9.1 | 90.9 | 0.0 | -5.01 | 0.81 | 0.77 | — | 6.0 | 0.003 | 0.78 | 0.0 | 0.05 | 12.89 | 0.01 | 2.093 | 22.26 | 0.00 | 8.0 | 92.0 | 0.0 | -2.07 | 1.75 | 0.82 | 0.80 | — | 27768 | 3462 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 7S9D | 24933 | 2024-03-15 | 2021-09-20 | 4.6 | 4.40 | — | 4.1 | 0.006 | 0.89 | 0.0 | 0.05 | 11.27 | 0.00 | 2.095 | 23.20 | 0.35 | 10.7 | 89.0 | 0.3 | -0.95 | 0.61 | 0.80 | — | 4.1 | 0.002 | 0.64 | 0.0 | 0.04 | 11.73 | 0.00 | 2.153 | 11.67 | 0.00 | 8.0 | 91.7 | 0.3 | -0.75 | 0.44 | 0.59 | 0.77 | — | 10462 | 1354 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 7SN2 | 25209 | 2024-03-14 | 2021-10-27 | 4.3 | 3.73 | — | 3.7 | 0.007 | 1.31 | 1.0 | 0.07 | 17.66 | 0.01 | 1.905 | 8.33 | 0.00 | 0.8 | 98.9 | 0.3 | -1.92 | 0.54 | 0.70 | — | 3.6 | 0.003 | 0.69 | 0.0 | 0.05 | 13.84 | 0.01 | 1.996 | 13.33 | 0.00 | 6.5 | 93.5 | 0.0 | -1.46 | 0.51 | 0.54 | 0.71 | — | 10092 | 650 | 5 | 0 | 10 | 0 | 4904 | logfile |
✔ | 7MQS | 23951 | 2024-03-16 | 2021-05-06 | 4.4 | 4.79 | 4.46 | 4.4 | 0.015 | 1.73 | 7.0 | 0.10 | 15.00 | 0.01 | 2.416 | 3.33 | 0.00 | 9.6 | 89.8 | 0.6 | -3.94 | 0.83 | 0.76 | — | 4.4 | 0.004 | 0.80 | 0.0 | 0.05 | 14.06 | 0.00 | 2.087 | 22.15 | 0.00 | 11.5 | 88.2 | 0.3 | -2.11 | 0.68 | 0.84 | 0.79 | — | 14028 | 1739 | 8 | 0 | 0 | 0 | 0 | logfile |
✔ | 3JCo | 6574 | 2024-03-21 | 2016-01-06 | 4.8 | 5.76 | — | 4.7 | 0.012 | 1.35 | 4.0 | 0.06 | 10.71 | 0.01 | 1.268 | 95.78 | 0.41 | 13.5 | 85.0 | 1.5 | -5.20 | 0.87 | 0.76 | — | 4.7 | 0.004 | 0.83 | 0.0 | 0.05 | 12.35 | 0.01 | 1.948 | 34.99 | 0.00 | 8.2 | 91.4 | 0.4 | -1.72 | 3.09 | 0.90 | 0.84 | — | 104317 | 13329 | 47 | 0 | 0 | 0 | 0 | logfile |