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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 7K3A | 22654 | 2023-02-23 | 2020-09-10 | 4.2 | 4.49 | — | 4.2 | 0.004 | 0.73 | 0.0 | 0.05 | 12.62 | 0.00 | 2.053 | 12.86 | 0.17 | 5.1 | 94.9 | 0.0 | -0.62 | 0.85 | 0.73 | — | 4.2 | 0.003 | 0.68 | 0.0 | 0.05 | 12.67 | 0.00 | 2.099 | 16.25 | 0.00 | 4.8 | 95.2 | 0.0 | -0.52 | 2.08 | 0.91 | 0.83 | — | 21426 | 2691 | 27 | 0 | 54 | 0 | 0 | logfile |
✔ | 7PEY | 13361 | 2023-02-21 | 2021-08-11 | 4.5 | 5.20 | — | 3.8 | 0.006 | 0.90 | 0.0 | 0.05 | 29.92 | 0.01 | 2.177 | 7.49 | 0.00 | 1.6 | 98.4 | 0.0 | -0.09 | 0.89 | 0.84 | — | 3.8 | 0.005 | 0.68 | 0.0 | 0.04 | 29.92 | 0.00 | 2.127 | 22.29 | 0.00 | 3.1 | 96.9 | 0.0 | 1.41 | 1.31 | 0.89 | 0.85 | — | 13099 | 768 | 10 | 342 | 0 | 0 | 0 | logfile |
✔ | 6DZM | 8936 | 2023-02-21 | 2018-07-05 | 4.29 | 4.66 | — | 4.3 | 0.008 | 0.91 | 0.0 | 0.05 | 9.66 | 0.01 | 2.058 | 8.59 | 0.00 | 13.6 | 86.4 | 0.0 | -4.76 | 0.77 | 0.80 | — | 4.3 | 0.003 | 0.72 | 0.0 | 0.05 | 11.96 | 0.00 | 2.177 | 14.86 | 0.00 | 9.9 | 90.1 | 0.0 | -1.81 | 0.96 | 0.79 | 0.83 | — | 13584 | 1695 | 24 | 0 | 27 | 0 | 0 | logfile |
✔ | 7M61 | 23686 | 2023-02-16 | 2021-03-25 | 3.8 | 3.83 | — | 4.1 | 0.005 | 1.01 | 0.0 | 0.08 | 12.79 | 0.00 | 2.218 | 22.02 | 0.00 | 14.3 | 85.7 | 0.0 | -4.63 | 0.49 | 0.73 | 2.45 | 3.9 | 0.004 | 0.80 | 0.0 | 0.05 | 14.85 | 0.00 | 2.106 | 21.09 | 0.00 | 14.3 | 85.7 | 0.0 | -4.66 | 0.84 | 0.48 | 0.75 | 2.97 | 1690 | 230 | 10 | 0 | 10 | 0 | 0 | logfile |
✔ | 8EXQ | 28659 | 2023-02-19 | 2022-10-25 | 4.9 | 5.40 | 5.55 | 6.0 | 0.020 | 1.74 | 0.0 | 0.10 | 10.28 | 0.01 | 2.002 | 1.81 | 0.00 | 2.5 | 97.3 | 0.2 | 0.34 | 0.52 | 0.45 | — | 6.0 | 0.003 | 0.74 | 0.0 | 0.04 | 12.89 | 0.00 | 2.068 | 17.98 | 0.00 | 5.3 | 94.5 | 0.2 | -0.50 | 2.54 | 0.58 | 0.63 | — | 9304 | 1108 | 4 | 0 | 2 | 0 | 0 | logfile |
✔ | 6PVL | 20492 | 2023-02-23 | 2019-07-21 | 4.4 | 4.48 | — | 4.4 | 0.008 | 1.13 | 0.0 | 0.06 | 11.67 | 0.01 | 2.202 | 6.80 | 1.39 | 15.4 | 84.2 | 0.5 | -5.53 | 0.69 | 0.81 | — | 4.4 | 0.004 | 0.85 | 0.0 | 0.04 | 13.22 | 0.00 | 2.071 | 16.18 | 0.00 | 12.8 | 87.0 | 0.2 | -1.56 | 1.50 | 0.70 | 0.82 | — | 21006 | 2576 | 5 | 0 | 2 | 0 | 0 | logfile |
✔ | 7AWA | 11928 | 2023-02-17 | 2020-11-06 | 3.5 | 3.83 | — | 3.6 | 0.003 | 0.64 | 0.0 | 0.04 | 14.22 | 0.00 | 2.126 | 6.77 | 0.00 | 5.8 | 94.2 | 0.0 | -2.52 | 0.57 | 0.81 | 2.14 | 3.7 | 0.002 | 0.52 | 0.0 | 0.04 | 15.06 | 0.00 | 2.163 | 6.96 | 0.00 | 3.7 | 96.3 | 0.0 | -0.59 | 1.17 | 0.54 | 0.80 | 1.51 | 5310 | 328 | 1 | 0 | 0 | 0 | 2703 | logfile |
✔ | 7MR1 | 23953 | 2023-02-22 | 2021-05-07 | 4.2 | 4.74 | — | 4.6 | 0.003 | 0.78 | 0.0 | 0.05 | 14.91 | 0.01 | 2.237 | 5.72 | 0.00 | 5.5 | 94.5 | 0.0 | -1.78 | 0.85 | 0.84 | — | 4.6 | 0.004 | 0.68 | 0.0 | 0.04 | 14.81 | 0.00 | 2.159 | 12.60 | 0.00 | 7.5 | 92.4 | 0.0 | -0.59 | 0.33 | 0.85 | 0.84 | — | 18473 | 2316 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 7D43 | 30568 | 2023-02-27 | 2020-09-22 | 4.3 | 4.40 | — | 4.3 | 0.006 | 0.99 | 0.0 | 0.05 | 14.62 | 0.01 | 2.018 | 28.45 | 0.31 | 18.3 | 81.6 | 0.1 | -6.11 | 0.83 | 0.79 | — | 4.3 | 0.005 | 0.79 | 0.0 | 0.05 | 13.78 | 0.00 | 2.083 | 20.44 | 0.00 | 12.6 | 87.3 | 0.0 | -2.75 | 1.57 | 0.83 | 0.78 | — | 31009 | 4347 | 14 | 0 | 0 | 0 | 0 | logfile |
✔ | 7EoQ | 31227 | 2023-02-25 | 2021-04-22 | 4.1 | 4.43 | — | 4.1 | 0.002 | 0.46 | 0.0 | 0.04 | 10.21 | 0.00 | 2.195 | 7.68 | 2.14 | 4.7 | 95.3 | 0.0 | 0.09 | 0.86 | 0.74 | — | 4.1 | 0.002 | 0.59 | 0.0 | 0.04 | 11.26 | 0.00 | 2.196 | 13.19 | 0.00 | 6.8 | 93.2 | 0.0 | -0.65 | 1.22 | 0.89 | 0.79 | — | 24742 | 3144 | 8 | 0 | 10 | 0 | 0 | logfile |
✔ | 8ATF | 15647 | 2023-02-21 | 2022-08-23 | 3.45 | 3.54 | 3.42 | 3.5 | 0.013 | 1.99 | 4.0 | 0.11 | 24.98 | 0.03 | 2.090 | 4.15 | 1.81 | 3.1 | 96.2 | 0.7 | -2.09 | 0.71 | 0.80 | 2.97 | 3.5 | 0.003 | 0.58 | 0.0 | 0.03 | 25.88 | 0.00 | 2.235 | 6.93 | 0.00 | 1.8 | 98.2 | 0.0 | 1.86 | 2.25 | 0.78 | 0.85 | 1.65 | 15719 | 1219 | 13 | 286 | 1 | 0 | 0 | logfile |
✔ | 7WBL | 32405 | 2023-02-20 | 2021-12-17 | 3.4 | 3.46 | — | 3.5 | 0.004 | 0.58 | 0.0 | 0.04 | 15.30 | 0.00 | 2.158 | 6.95 | 0.72 | 3.6 | 96.1 | 0.4 | 0.52 | 0.67 | 0.77 | 2.33 | 3.5 | 0.002 | 0.54 | 0.0 | 0.04 | 16.74 | 0.00 | 2.193 | 6.00 | 0.00 | 2.9 | 97.0 | 0.1 | 1.12 | 0.32 | 0.67 | 0.79 | 1.43 | 6484 | 791 | 3 | 0 | 5 | 0 | 0 | logfile |
✔ | 7PDD | 13334 | 2023-02-17 | 2021-08-05 | 4.2 | 4.47 | — | 4.3 | 0.004 | 0.75 | 0.0 | 0.04 | 14.38 | 0.00 | 2.092 | 20.92 | 0.00 | 7.1 | 92.9 | 0.0 | -4.11 | 0.79 | 0.75 | — | 4.3 | 0.003 | 0.79 | 0.0 | 0.05 | 14.04 | 0.00 | 2.224 | 17.90 | 0.00 | 5.3 | 94.7 | 0.0 | -1.20 | 0.90 | 0.78 | 0.72 | — | 4516 | 577 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 6B3o | 7040 | 2023-02-18 | 2017-09-22 | 4.1 | 4.04 | — | 4.1 | 0.024 | 1.82 | 0.0 | 0.11 | 10.99 | 0.01 | 2.285 | 2.28 | 0.34 | 2.1 | 97.6 | 0.3 | 1.14 | 0.69 | 0.76 | — | 4.0 | 0.005 | 0.75 | 0.0 | 0.04 | 14.24 | 0.00 | 2.119 | 10.89 | 0.00 | 4.7 | 95.0 | 0.3 | 0.76 | 1.67 | 0.71 | 0.77 | — | 7980 | 1032 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 7EoU | 31231 | 2023-02-25 | 2021-04-22 | 4.3 | 4.50 | — | 4.2 | 0.002 | 0.43 | 0.0 | 0.04 | 8.92 | 0.00 | 2.243 | 9.12 | 1.92 | 3.9 | 96.0 | 0.1 | 0.78 | 0.86 | 0.73 | — | 4.2 | 0.002 | 0.60 | 0.0 | 0.04 | 11.17 | 0.00 | 2.074 | 13.71 | 0.00 | 5.3 | 94.6 | 0.1 | -0.18 | 1.64 | 0.89 | 0.79 | — | 24593 | 3084 | 8 | 0 | 19 | 0 | 0 | logfile |
✔ | 6DVZ | 8921 | 2023-02-23 | 2018-06-25 | 4.24 | 4.48 | — | 4.4 | 0.008 | 1.27 | 0.0 | 0.06 | 12.54 | 0.01 | 2.265 | 5.74 | 0.18 | 16.6 | 82.6 | 0.8 | -5.86 | 0.70 | 0.80 | — | 4.4 | 0.003 | 0.81 | 0.0 | 0.04 | 13.96 | 0.00 | 1.621 | 12.77 | 0.00 | 13.5 | 86.1 | 0.4 | -2.24 | 0.88 | 0.70 | 0.80 | — | 20976 | 2572 | 8 | 0 | 12 | 0 | 0 | logfile |
✔ | 7NBX | 12262 | 2023-02-24 | 2021-01-28 | 4.8 | 5.30 | 4.72 | 4.9 | 0.008 | 1.04 | 0.0 | 0.05 | 15.90 | 0.01 | 1.950 | 12.59 | 0.00 | 12.3 | 87.6 | 0.1 | -4.49 | 0.76 | 0.82 | — | 4.9 | 0.004 | 0.64 | 0.0 | 0.04 | 14.15 | 0.00 | 1.865 | 13.21 | 0.00 | 9.7 | 90.3 | 0.0 | -2.01 | 0.71 | 0.76 | 0.81 | — | 22637 | 1475 | 5 | 0 | 0 | 0 | 11129 | logfile |
✔ | 7WTH | 32786 | 2023-02-17 | 2022-02-04 | 4.3 | 3.63 | — | 4.0 | 0.004 | 0.78 | 0.0 | 0.05 | 12.97 | 0.01 | 2.169 | 9.08 | 0.85 | 8.0 | 92.0 | 0.0 | -2.03 | 0.69 | 0.70 | — | 3.8 | 0.004 | 0.77 | 0.0 | 0.05 | 13.51 | 0.00 | 2.154 | 11.58 | 0.00 | 10.6 | 89.2 | 0.2 | -2.44 | 1.20 | 0.69 | 0.72 | — | 3257 | 421 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 7DTW | 30856 | 2023-02-19 | 2021-01-06 | 4.5 | 4.74 | — | 3.6 | 0.007 | 0.99 | 0.0 | 0.06 | 13.61 | 0.01 | 2.267 | 9.20 | 0.00 | 10.3 | 89.7 | 0.0 | -4.26 | 0.71 | 0.78 | — | 3.7 | 0.002 | 0.59 | 0.0 | 0.04 | 12.46 | 0.00 | 2.203 | 8.26 | 0.00 | 8.6 | 91.4 | 0.0 | -1.11 | 0.54 | 0.71 | 0.79 | — | 10250 | 1556 | 8 | 0 | 14 | 0 | 0 | logfile |
✔ | 7ZiR | 14738 | 2023-02-16 | 2022-04-08 | 2.5 | 2.51 | 2.04 | 2.7 | 0.002 | 0.34 | 0.0 | 0.03 | 9.02 | 0.00 | 2.317 | 1.65 | 0.00 | 2.0 | 98.0 | 0.0 | -3.82 | 0.48 | 0.90 | 7.46 | 2.7 | 0.003 | 0.46 | 0.0 | 0.04 | 12.12 | 0.00 | 2.316 | 0.28 | 0.00 | 2.9 | 97.1 | 0.0 | -3.83 | 1.03 | 0.50 | 0.93 | 7.96 | 2120 | 255 | 10 | 0 | 0 | 50 | 0 | logfile |