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Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 7PM3 | 13511 | 2023-12-08 | 2021-09-01 | 3.1 | 3.07 | 3.12 | 3.1 | 0.025 | 2.31 | 0.0 | 0.07 | 19.42 | 0.01 | 2.019 | 5.42 | 0.00 | 0.0 | 100.0 | 0.0 | -0.98 | 0.85 | 0.82 | 3.08 | 3.1 | 0.003 | 1.25 | 0.0 | 0.04 | 18.56 | 0.00 | 2.046 | 8.07 | 0.11 | 2.0 | 98.0 | 0.0 | 1.21 | 1.26 | 0.87 | 0.86 | 2.43 | 8940 | 1113 | 6 | 0 | 12 | 0 | 0 | logfile |
✔ | 8DST | 27688 | 2023-12-07 | 2022-07-22 | 3.2 | 2.71 | 2.73 | 3.4 | 0.046 | 2.10 | 0.0 | 0.03 | 22.27 | 0.00 | 2.205 | 41.47 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.44 | 0.57 | — | 2.4 | 0.136 | 9.30 | 191.0 | 0.34 | 28.93 | 0.03 | 1.065 | 133.79 | 0.00 | 0.0 | 0.0 | 0.0 | — | 2.16 | 0.55 | 0.80 | — | 3078 | 0 | 54 | 0 | 270 | 0 | 0 | logfile |
✔ | 7R6M | 24282 | 2023-12-08 | 2021-06-22 | 3.68 | 3.27 | — | 3.4 | 0.006 | 0.94 | 0.0 | 0.04 | 24.58 | 0.01 | 2.005 | 4.72 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.53 | 0.72 | — | 3.4 | 0.007 | 0.85 | 0.0 | 0.04 | 24.65 | 0.01 | 1.757 | 17.33 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.19 | 0.55 | 0.73 | — | 7755 | 0 | 3 | 362 | 13 | 0 | 0 | logfile |
✔ | 7LYT | 23601 | 2023-12-10 | 2021-03-08 | 2.9 | 2.52 | 2.91 | 3.0 | 0.009 | 0.55 | 0.0 | 0.04 | 20.49 | 0.03 | 2.087 | 7.16 | 0.33 | 0.0 | 100.0 | 0.0 | -1.59 | 0.82 | 0.80 | 2.24 | 3.0 | 0.003 | 0.84 | 0.0 | 0.04 | 21.30 | 0.00 | 1.238 | 8.48 | 1.49 | 4.9 | 95.1 | 0.0 | 0.00 | 1.22 | 0.83 | 0.82 | 2.88 | 14354 | 712 | 5 | 92 | 6 | 0 | 6722 | logfile |
✔ | 7RX4 | 24724 | 2023-12-10 | 2021-08-21 | 3.8 | 3.99 | — | 4.0 | 0.003 | 0.49 | 0.0 | 0.04 | 13.38 | 0.00 | 1.928 | 12.86 | 0.00 | 0.0 | 100.0 | 0.0 | 6.26 | 0.60 | 0.78 | 1.41 | 3.9 | 0.003 | 0.51 | 0.0 | 0.04 | 16.36 | 0.00 | 2.337 | 5.07 | 1.27 | 0.0 | 100.0 | 0.0 | 6.07 | 0.49 | 0.62 | 0.80 | 0.89 | 13560 | 1740 | 60 | 0 | 0 | 0 | 0 | logfile |
✔ | 7UUQ | 26800 | 2023-12-07 | 2022-04-28 | 3.1 | 3.45 | 2.98 | 3.3 | 0.018 | 1.82 | 0.0 | 0.06 | 18.29 | 0.01 | 1.865 | 20.35 | 0.00 | 0.0 | 100.0 | 0.0 | -9.31 | 0.68 | 0.85 | 2.95 | 3.3 | 0.118 | 4.56 | 11.0 | 0.23 | 30.56 | 0.02 | 1.630 | 55.02 | 2.47 | 64.9 | 32.1 | 3.0 | -10.63 | 0.67 | 0.73 | 0.90 | 3.19 | 4760 | 364 | 98 | 0 | 98 | 0 | 0 | logfile |
✔ | 6X5i | 22051 | 2023-12-08 | 2020-05-26 | 4.3 | 4.27 | — | 4.0 | 0.060 | 2.79 | 0.0 | 0.16 | 29.93 | 0.00 | 2.206 | 29.57 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.70 | 0.70 | — | 4.0 | 0.011 | 1.53 | 0.0 | 0.13 | 24.62 | 0.00 | 1.571 | 57.36 | 0.00 | 0.0 | 0.0 | 0.0 | — | 3.30 | 0.69 | 0.74 | — | 4480 | 70 | 70 | 0 | 280 | 0 | 0 | logfile |
✔ | 8EHR | 28150 | 2023-12-08 | 2022-09-14 | 3.2 | 2.95 | 3.03 | 3.1 | 0.003 | 0.55 | 0.0 | 0.05 | 13.08 | 0.00 | 2.374 | 2.29 | 0.00 | 0.0 | 100.0 | 0.0 | 1.82 | 0.58 | 0.85 | 3.24 | 3.1 | 0.002 | 0.48 | 0.0 | 0.04 | 15.23 | 0.00 | 2.320 | 4.65 | 0.37 | 0.9 | 99.1 | 0.0 | 1.26 | 1.17 | 0.58 | 0.87 | 3.27 | 7350 | 1022 | 7 | 0 | 0 | 0 | 0 | logfile |
✔ | 7XSN | 33428 | 2023-12-08 | 2022-05-14 | 3.01 | 4.02 | 3.04 | 3.2 | 0.013 | 1.06 | 0.0 | 0.05 | 23.82 | 0.01 | 2.252 | 5.79 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.91 | 0.84 | — | 3.2 | 0.006 | 0.62 | 0.0 | 0.03 | 23.55 | 0.00 | 2.104 | 20.10 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.24 | 0.92 | 0.88 | — | 8279 | 0 | 1 | 387 | 0 | 0 | 0 | logfile |
✔ | 7XSK | 33425 | 2023-12-09 | 2022-05-14 | 3.53 | 4.49 | 3.42 | 3.4 | 0.001 | 0.44 | 0.0 | 0.02 | 23.47 | 0.00 | 1.970 | 6.98 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.90 | 0.76 | — | 3.4 | 0.007 | 0.70 | 0.0 | 0.04 | 24.80 | 0.01 | 1.762 | 32.64 | 0.00 | 0.0 | 0.0 | 0.0 | — | 1.16 | 0.91 | 0.83 | — | 12467 | 0 | 1 | 388 | 0 | 0 | 4168 | logfile |
✔ | 6WKX | 21812 | 2023-12-10 | 2020-04-17 | 4.2 | 4.31 | — | 4.2 | 0.006 | 0.59 | 0.0 | 0.04 | 15.11 | 0.00 | 2.298 | 2.52 | 0.00 | 0.0 | 100.0 | 0.0 | -3.67 | 0.77 | 0.90 | — | 4.2 | 0.003 | 0.66 | 0.0 | 0.04 | 16.29 | 0.00 | 2.237 | 9.35 | 0.00 | 0.1 | 99.9 | 0.0 | 4.37 | 1.00 | 0.77 | 0.89 | — | 12915 | 1575 | 105 | 0 | 0 | 0 | 0 | logfile |
✔ | 7LQH | 23486 | 2023-12-09 | 2021-02-13 | 3.4 | 3.12 | — | 3.4 | 0.016 | 1.42 | 0.0 | 0.04 | 20.72 | 0.00 | 2.098 | 31.15 | 14.58 | 0.0 | 100.0 | 0.0 | -5.94 | 0.59 | 0.80 | 5.83 | 3.2 | 0.111 | 4.25 | 190.0 | 0.31 | 24.04 | 0.02 | 1.610 | 112.99 | 4.28 | 40.1 | 59.5 | 0.3 | -8.01 | 3.50 | 0.66 | 0.87 | 3.32 | 12096 | 1152 | 144 | 0 | 0 | 0 | 0 | logfile |
✔ | 6WL0 | 21814 | 2023-12-09 | 2020-04-17 | 4.4 | 4.62 | — | 4.4 | 0.006 | 0.82 | 0.0 | 0.04 | 18.91 | 0.00 | 2.353 | 8.18 | 0.00 | 0.0 | 100.0 | 0.0 | -5.48 | 0.79 | 0.88 | — | 4.4 | 0.005 | 0.96 | 0.0 | 0.04 | 14.65 | 0.00 | 2.062 | 21.77 | 0.18 | 0.1 | 99.9 | 0.0 | 0.14 | 1.67 | 0.79 | 0.86 | — | 11480 | 1476 | 41 | 0 | 0 | 0 | 0 | logfile |
✔ | 6A7F | 6993 | 2023-12-09 | 2018-07-03 | 3.4 | 3.51 | — | 3.4 | 0.014 | 1.17 | 0.0 | 0.06 | 11.20 | 0.01 | 2.271 | 4.26 | 0.00 | 0.0 | 100.0 | 0.0 | -2.13 | 0.55 | 0.84 | 0.56 | 3.4 | 0.004 | 0.71 | 0.0 | 0.04 | 17.78 | 0.00 | 2.148 | 14.92 | 0.41 | 0.7 | 99.3 | 0.0 | 1.97 | 2.06 | 0.60 | 0.86 | -0.08 | 10830 | 1410 | 30 | 0 | 0 | 0 | 0 | logfile |
✔ | 7Q66 | 13853 | 2023-12-07 | 2021-11-05 | 2.79 | 2.87 | 2.63 | 2.9 | 0.021 | 1.42 | 0.0 | 0.11 | 12.58 | 0.01 | 2.277 | 13.59 | 6.52 | 0.0 | 100.0 | 0.0 | -4.18 | 0.63 | 0.84 | 3.82 | 2.9 | 0.004 | 0.75 | 0.0 | 0.04 | 16.09 | 0.00 | 2.208 | 12.61 | 6.92 | 0.8 | 99.2 | 0.0 | -4.23 | 0.65 | 0.62 | 0.88 | 4.75 | 4807 | 682 | 22 | 0 | 0 | 0 | 0 | logfile |
✔ | 8F54 | 28860 | 2023-12-10 | 2022-11-11 | 2.5 | 2.67 | 2.56 | 2.7 | 0.003 | 0.45 | 0.0 | 0.03 | 11.59 | 0.00 | 2.491 | 0.57 | 0.00 | 0.0 | 100.0 | 0.0 | 3.06 | 0.68 | 0.76 | 3.44 | 2.7 | 0.004 | 0.58 | 0.0 | 0.04 | 18.01 | 0.01 | 2.225 | 4.57 | 0.76 | 1.3 | 98.7 | 0.0 | 3.13 | 1.40 | 0.68 | 0.81 | 3.67 | 66960 | 4020 | 60 | 0 | 0 | 0 | 33840 | logfile |
✔ | 8BFA | 16018 | 2023-12-07 | 2022-10-24 | 3.0 | 3.05 | 3.02 | 3.3 | 0.002 | 0.39 | 0.0 | 0.05 | 13.94 | 0.00 | 2.592 | 6.46 | 0.00 | 0.0 | 100.0 | 0.0 | -3.13 | 0.47 | 0.82 | 5.29 | 3.3 | 0.006 | 0.62 | 0.0 | 0.05 | 17.14 | 0.00 | 2.103 | 7.90 | 1.43 | 3.3 | 96.7 | 0.0 | -2.68 | 1.99 | 0.53 | 0.89 | 6.48 | 2860 | 380 | 10 | 0 | 0 | 0 | 0 | logfile |
✔ | 6YoV | 10864 | 2023-12-09 | 2020-04-15 | 3.42 | 4.61 | — | 3.9 | 0.011 | 1.14 | 0.0 | 0.07 | 25.19 | 0.01 | 2.395 | 0.86 | 0.00 | 0.0 | 100.0 | 0.0 | 0.87 | 0.88 | 0.82 | 1.84 | 3.8 | 0.004 | 0.70 | 0.0 | 0.04 | 25.94 | 0.00 | 2.129 | 12.07 | 0.43 | 1.6 | 98.4 | 0.0 | 2.32 | 1.24 | 0.88 | 0.84 | 1.89 | 12298 | 898 | 18 | 262 | 8 | 0 | 0 | logfile |
✔ | 6o1o | 0454 | 2023-12-10 | 2019-02-21 | 3.8 | 4.00 | — | 3.6 | 0.008 | 1.55 | 0.0 | 0.07 | 18.00 | 0.01 | 2.295 | 4.58 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.72 | 0.70 | — | 3.6 | 0.012 | 1.72 | 0.0 | 0.07 | 16.85 | 0.00 | 1.998 | 31.06 | 0.00 | 0.0 | 0.0 | 0.0 | — | 1.70 | 0.78 | 0.76 | — | 15193 | 0 | 14 | 66 | 2757 | 0 | 0 | logfile |
✔ | 8oL5 | 16949 | 2023-12-07 | 2023-03-30 | 3.4 | 3.10 | 1.47 | 3.0 | 0.003 | 0.44 | 0.0 | 0.06 | 9.97 | 0.00 | 2.393 | 2.17 | 0.00 | 0.0 | 100.0 | 0.0 | -0.75 | 0.53 | 0.87 | 5.76 | 3.0 | 0.004 | 0.50 | 0.0 | 0.05 | 15.79 | 0.00 | 2.344 | 6.30 | 0.00 | 1.7 | 98.3 | 0.0 | -1.33 | 2.41 | 0.55 | 0.88 | 5.15 | 2260 | 310 | 10 | 0 | 0 | 0 | 0 | logfile |