The table shows a selection of parameters. Activate more columns using
the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 6X8M | 22094 | 2022-04-08 | 2020-06-01 | 2.2 | 2.07 | 2.27 | 2.2 | 0.005 | 0.63 | 0.0 | 0.05 | 13.91 | 0.01 | 2.264 | 5.48 | 0.82 | 3.3 | 96.7 | 0.0 | -1.41 | 0.74 | 0.86 | 6.01 | 2.1 | 0.005 | 0.73 | 0.0 | 0.05 | 16.05 | 0.01 | 2.097 | 4.08 | 1.07 | 3.3 | 96.7 | 0.0 | -0.12 | 0.62 | 0.77 | 0.88 | 5.81 | 133440 | 16800 | 60 | 0 | 0 | 0 | 0 | logfile |
✔ | 7LXY | 23579 | 2022-04-08 | 2021-03-05 | 2.2 | 2.32 | 2.27 | 2.3 | 0.011 | 1.21 | 0.0 | 0.07 | 11.01 | 0.01 | 2.182 | 1.50 | 0.09 | 1.8 | 98.2 | 0.0 | 0.45 | 0.75 | 0.81 | 4.97 | 2.3 | 0.004 | 0.65 | 0.0 | 0.05 | 14.30 | 0.00 | 2.026 | 5.29 | 1.39 | 1.8 | 98.2 | 0.0 | 0.93 | 0.52 | 0.77 | 0.84 | 4.56 | 33987 | 4446 | 36 | 0 | 69 | 729 | 0 | logfile |
✔ | 7P8W | 13256 | 2022-04-06 | 2021-07-23 | 2.2 | 2.34 | — | 2.3 | 0.014 | 1.79 | 4.0 | 0.09 | 14.82 | 0.01 | 2.340 | 1.39 | 0.75 | 3.8 | 96.0 | 0.2 | -1.36 | 0.85 | 0.92 | 6.91 | 2.3 | 0.003 | 0.62 | 0.0 | 0.04 | 15.61 | 0.00 | 2.221 | 3.19 | 0.46 | 2.9 | 97.1 | 0.0 | 0.56 | 1.15 | 0.86 | 0.91 | 6.13 | 17668 | 2008 | 12 | 0 | 8 | 1110 | 0 | logfile |
✔ | 7DRT | 30827 | 2022-04-04 | 2020-12-29 | 2.2 | 2.32 | — | 2.3 | 0.011 | 1.32 | 9.0 | 0.09 | 12.92 | 0.01 | 2.064 | 5.88 | 2.38 | 5.4 | 94.1 | 0.5 | -0.76 | 0.39 | 0.58 | 3.02 | 2.3 | 0.004 | 0.73 | 0.0 | 0.04 | 17.38 | 0.01 | 2.204 | 10.65 | 5.87 | 6.8 | 93.1 | 0.1 | -0.60 | 1.11 | 0.65 | 0.77 | 2.98 | 6849 | 830 | 7 | 0 | 7 | 10 | 0 | logfile |
✔ | 7ST9 | 25422 | 2022-04-09 | 2021-11-12 | 2.2 | 2.95 | — | 2.8 | 0.002 | 0.46 | 0.0 | 0.04 | 16.91 | 0.00 | 1.796 | 2.94 | 0.71 | 1.5 | 98.5 | 0.0 | 2.56 | 0.82 | 0.78 | 3.47 | 2.8 | 0.009 | 0.65 | 0.0 | 0.04 | 17.52 | 0.00 | 1.698 | 4.13 | 1.39 | 1.3 | 98.7 | 0.0 | 2.04 | 2.70 | 0.82 | 0.86 | 3.70 | 46553 | 2802 | 25 | 36 | 9 | 423 | 22930 | logfile |
✔ | 7TYF | 26178 | 2022-04-05 | 2022-02-13 | 2.2 | 2.16 | 2.13 | 2.2 | 0.004 | 0.57 | 0.0 | 0.04 | 14.43 | 0.00 | 2.234 | 4.82 | 0.87 | 1.8 | 98.2 | 0.0 | -1.73 | 0.64 | 0.82 | 5.12 | 2.2 | 0.002 | 0.60 | 0.0 | 0.05 | 15.92 | 0.00 | 2.183 | 6.50 | 1.36 | 1.5 | 98.5 | 0.0 | 0.75 | 0.50 | 0.66 | 0.84 | 4.40 | 10331 | 1266 | 12 | 0 | 16 | 83 | 0 | logfile |
✔ | 6WZ5 | 21970 | 2022-04-05 | 2020-05-13 | 2.2 | 2.36 | — | 2.2 | 0.008 | 0.69 | 0.0 | 0.04 | 28.82 | 0.00 | 2.253 | 4.68 | 0.93 | 2.2 | 97.8 | 0.0 | 0.00 | 0.75 | 0.71 | 2.93 | 2.2 | 0.005 | 0.62 | 0.0 | 0.04 | 29.34 | 0.00 | 2.154 | 5.62 | 0.77 | 1.8 | 98.2 | 0.0 | 2.64 | 0.89 | 0.87 | 0.89 | 3.82 | 12443 | 774 | 10 | 306 | 0 | 0 | 0 | logfile |
✔ | 7oF0 | 12865 | 2022-04-09 | 2021-05-04 | 2.2 | 3.01 | 2.23 | 2.8 | 0.005 | 0.59 | 0.0 | 0.04 | 14.90 | 0.00 | 1.851 | 7.29 | 0.08 | 2.7 | 97.3 | 0.0 | 1.19 | 0.86 | 0.87 | 3.67 | 2.8 | 0.006 | 0.68 | 0.0 | 0.04 | 16.28 | 0.01 | 1.769 | 10.43 | 1.38 | 3.0 | 97.0 | 0.0 | 1.10 | 0.47 | 0.85 | 0.87 | 3.48 | 99476 | 8446 | 62 | 1432 | 64 | 0 | 0 | logfile |
✔ | 7N06 | 24101 | 2022-04-06 | 2021-05-25 | 2.2 | 2.34 | — | 2.2 | 0.007 | 0.63 | 0.0 | 0.05 | 14.55 | 0.00 | 2.096 | 3.28 | 2.10 | 2.5 | 97.4 | 0.1 | -1.80 | 0.83 | 0.88 | 7.00 | 2.2 | 0.003 | 0.55 | 0.0 | 0.05 | 16.62 | 0.00 | 2.075 | 4.04 | 0.92 | 1.6 | 98.4 | 0.0 | 0.41 | 1.11 | 0.84 | 0.89 | 6.20 | 17223 | 2082 | 21 | 18 | 0 | 555 | 0 | logfile |
✔ | 7BGL | 12183 | 2022-04-07 | 2021-01-07 | 2.2 | 2.57 | 2.32 | 2.5 | 0.007 | 0.65 | 0.0 | 0.08 | 19.44 | 0.00 | 1.980 | 30.00 | 2.50 | 7.3 | 92.7 | 0.0 | 0.56 | 0.73 | 0.87 | 3.07 | 2.5 | 0.003 | 0.61 | 0.0 | 0.05 | 17.04 | 0.00 | 2.156 | 8.45 | 3.24 | 7.7 | 92.3 | 0.0 | -0.14 | 0.93 | 0.74 | 0.90 | 3.10 | 120484 | 15626 | 104 | 0 | 52 | 0 | 0 | logfile |
✔ | 6M3X | 30073 | 2022-04-05 | 2020-03-04 | 2.24 | 2.31 | — | 2.3 | 0.006 | 0.81 | 0.0 | 0.05 | 13.95 | 0.01 | 2.222 | 3.45 | 0.37 | 3.2 | 96.8 | 0.0 | -2.65 | 0.78 | 0.90 | 7.35 | 2.3 | 0.006 | 0.74 | 0.0 | 0.05 | 16.80 | 0.01 | 2.314 | 5.98 | 1.12 | 3.2 | 96.8 | 0.0 | -0.02 | 0.41 | 0.80 | 0.92 | 6.65 | 62387 | 7440 | 72 | 0 | 24 | 2243 | 0 | logfile |
✘ | 7SA3 | 24943 | 2022-04-05 | 2021-09-22 | 2.25 | 1.86 | — | 2.2 | 0.022 | 2.28 | 0.0 | 0.08 | 20.01 | 0.01 | 1.206 | 11.57 | 4.04 | 3.7 | 96.0 | 0.2 | -1.16 | 0.78 | 0.84 | 4.95 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 15960 | 1644 | 19 | 0 | 79 | 230 | 0 | logfile |
✔ | 7TEY | 25855 | 2022-04-06 | 2022-01-06 | 2.25 | 2.88 | — | 2.7 | 0.004 | 0.78 | 0.0 | 0.06 | 12.97 | 0.01 | 2.293 | 3.31 | 0.00 | 2.0 | 98.0 | 0.0 | 0.06 | 0.77 | 0.83 | 3.44 | 2.7 | 0.004 | 0.58 | 0.0 | 0.05 | 14.91 | 0.00 | 2.126 | 6.66 | 0.93 | 2.0 | 98.0 | 0.0 | 0.68 | 1.16 | 0.76 | 0.84 | 3.54 | 21867 | 2703 | 24 | 0 | 56 | 0 | 0 | logfile |
✔ | 7VFD | 31949 | 2022-04-05 | 2021-09-13 | 2.25 | 2.33 | 2.21 | 2.3 | 0.004 | 0.53 | 0.0 | 0.05 | 12.47 | 0.00 | 2.204 | 3.62 | 0.60 | 3.7 | 96.3 | 0.0 | -0.65 | 0.81 | 0.88 | 6.01 | 2.3 | 0.002 | 0.49 | 0.0 | 0.05 | 15.37 | 0.00 | 2.246 | 3.23 | 0.47 | 2.1 | 97.9 | 0.0 | 0.43 | 1.13 | 0.80 | 0.88 | 5.42 | 13262 | 1623 | 6 | 0 | 0 | 350 | 0 | logfile |
✔ | 7DDE | 30652 | 2022-04-09 | 2020-10-28 | 2.26 | 3.31 | — | 3.0 | 0.009 | 1.14 | 10.0 | 0.07 | 14.34 | 0.01 | 2.042 | 8.45 | 1.16 | 5.0 | 94.9 | 0.0 | -2.84 | 0.71 | 0.85 | 3.66 | 3.0 | 0.003 | 0.65 | 0.0 | 0.05 | 16.03 | 0.00 | 1.969 | 13.61 | 1.01 | 6.2 | 93.8 | 0.0 | -0.22 | 1.17 | 0.69 | 0.85 | 3.23 | 51171 | 6300 | 36 | 0 | 48 | 1911 | 0 | logfile |
✔ | 7VDA | 31912 | 2022-04-06 | 2021-09-06 | 2.26 | 2.04 | 2.42 | 2.1 | 0.003 | 0.53 | 0.0 | 0.04 | 17.67 | 0.00 | 2.142 | 7.99 | 2.20 | 2.6 | 97.4 | 0.0 | 1.67 | 0.66 | 0.82 | 4.06 | 2.0 | 0.003 | 0.60 | 0.0 | 0.04 | 18.09 | 0.00 | 2.073 | 9.03 | 3.21 | 2.5 | 97.5 | 0.0 | 0.92 | 0.42 | 0.66 | 0.83 | 4.25 | 23292 | 2976 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 7VLK | 32023 | 2022-04-07 | 2021-10-04 | 2.27 | 2.77 | — | 2.6 | 0.002 | 0.50 | 0.0 | 0.04 | 17.01 | 0.00 | 2.195 | 6.32 | 2.51 | 2.0 | 98.0 | 0.0 | 1.38 | 0.76 | 0.84 | 3.20 | 2.6 | 0.003 | 0.56 | 0.0 | 0.04 | 17.13 | 0.00 | 2.162 | 6.42 | 2.98 | 2.6 | 97.4 | 0.0 | 1.39 | 0.27 | 0.77 | 0.86 | 3.26 | 28774 | 3698 | 12 | 0 | 0 | 0 | 0 | logfile |
✔ | 7QK6 | 14039 | 2022-04-04 | 2021-12-17 | 2.27 | 2.34 | 2.17 | 2.3 | 0.011 | 1.84 | 0.0 | 0.09 | 9.70 | 0.01 | 2.520 | 0.00 | 0.00 | 6.4 | 93.6 | 0.0 | -1.99 | 0.37 | 0.79 | 7.78 | 2.3 | 0.002 | 0.57 | 0.0 | 0.05 | 15.85 | 0.00 | 2.385 | 4.06 | 0.69 | 5.8 | 94.2 | 0.0 | -2.20 | 1.44 | 0.38 | 0.85 | 7.07 | 2469 | 162 | 3 | 0 | 0 | 0 | 1278 | logfile |
✔ | 7N00 | 24095 | 2022-04-04 | 2021-05-24 | 2.27 | 3.74 | 2.49 | 3.3 | 0.004 | 0.55 | 0.0 | 0.05 | 12.23 | 0.00 | 2.138 | 5.26 | 3.44 | 2.9 | 97.1 | 0.0 | -1.01 | 0.78 | 0.78 | 4.22 | 3.4 | 0.006 | 0.86 | 0.0 | 0.05 | 14.89 | 0.01 | 1.993 | 10.78 | 2.07 | 3.1 | 96.9 | 0.0 | -0.53 | 1.02 | 0.74 | 0.88 | 3.67 | 5817 | 806 | 4 | 0 | 0 | 0 | 0 | logfile |
✔ | 7DYR | 30923 | 2022-04-05 | 2021-01-22 | 2.28 | 2.34 | — | 2.5 | 0.008 | 0.77 | 0.0 | 0.05 | 15.40 | 0.01 | 2.205 | 6.01 | 3.56 | 7.2 | 92.5 | 0.3 | 0.10 | 0.68 | 0.76 | 2.43 | 2.4 | 0.003 | 0.60 | 0.0 | 0.04 | 15.90 | 0.01 | 2.208 | 5.71 | 2.40 | 5.5 | 94.4 | 0.2 | 1.78 | 0.54 | 0.83 | 0.89 | 2.33 | 13326 | 1791 | 12 | 0 | 3 | 0 | 0 | logfile |