Table showing results for April 2022

The table shows a selection of parameters. Activate more columns using the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model

Resolution

• Resolution
• D₉₉
• D_FSC
• D_Model
• D_Model refined

Map vs model

• CC_box
• CC_mask
• EMRinger
• CC_box refined
• CC_mask refined
• EMRinger refined

Geometry

• Bond rmsd
• Angle rmsd
• Cβ devts
• Chirality
• Dihedral rmsd
• Plane rmsd
• Min nonbonded
• Clashscore
• Rota outliers
• Bond rmsd refined
• Angle rmsd refined
• Cβ devts refined
• Chirality refined
• Dihedral rmsd refined
• Plane rmsd refined
• Min nonbonded refined
• Clashscore refined
• Rota outliers refined
• RMSD

Ramachandran

• Rama allowed
• Rama favored
• Rama outliers
• Z-score
• Rama allowed refined
• Rama favored refined
• Rama outliers refined
• Z-score refined

Composition

• # atoms
• # residues
• # chains
• # nucleotides
• # other
• # water
• # H

Other

• Date processed
• Release Date

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Status	PDB code	EMDB code	Date processed	Release Date	Resolution	D99	DFSC	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	CCbox	CCmask	EMRinger	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	RMSD	CCbox	CCmask	EMRinger	# atoms	# residues	# chains	# nucleotides	# other	# water	# H	Logfile
✔	7MU1	24001	2022-04-07	2021-05-14	3.3	3.26	—	3.2	0.006	0.65	0.0	0.04	13.49	0.00	2.078	13.19	0.43	3.4	96.6	0.0	0.09	0.86	0.88	3.31	3.2	0.003	0.54	0.0	0.04	15.31	0.00	2.274	7.34	0.00	4.4	95.6	0.0	1.01	0.29	0.87	0.91	2.98	132492	16104	61	0	61	0	0	logfile
✔	7V7F	31769	2022-04-07	2021-08-21	2.9	3.82	—	3.2	0.004	0.56	0.0	0.05	13.42	0.00	2.061	7.24	0.00	5.1	94.7	0.1	-0.13	0.88	0.86	2.44	3.2	0.005	0.58	0.0	0.05	14.94	0.00	2.108	8.16	1.51	5.7	94.2	0.1	-0.14	0.29	0.89	0.87	2.25	25503	3114	42	0	84	0	0	logfile
✔	7M4Y	23670	2022-04-09	2021-03-22	2.5	1.72	—	1.5	0.008	0.60	2.0	0.05	16.30	0.02	1.783	3.46	2.14	2.5	97.3	0.2	1.41	0.77	0.73	3.74	1.5	0.005	0.79	0.0	0.04	16.55	0.01	1.670	4.70	3.79	3.1	96.7	0.1	0.33	0.30	0.79	0.77	3.89	139817	5511	80	4453	200	1044	0	logfile
✔	7NNP	12482	2022-04-05	2021-02-25	3.2	2.99	3.18	3.2	0.006	0.96	0.0	0.05	15.80	0.01	2.223	5.43	0.00	3.5	96.5	0.0	-0.72	0.67	0.82	2.17	3.2	0.003	0.56	0.0	0.04	15.88	0.00	2.199	9.72	0.18	3.0	97.0	0.0	0.80	0.30	0.70	0.85	1.86	11096	1456	6	0	11	0	0	logfile
✔	7V7H	31771	2022-04-09	2021-08-21	3.2	4.02	—	3.7	0.002	0.54	0.0	0.05	13.43	0.00	2.162	7.21	0.00	4.2	95.7	0.1	-0.31	0.85	0.85	1.93	3.7	0.003	0.53	0.0	0.05	14.75	0.00	2.175	7.23	0.07	4.6	95.4	0.0	-0.14	0.30	0.85	0.84	1.87	50949	6209	84	0	174	0	0	logfile
✔	7ENN	31217	2022-04-05	2021-04-18	2.8	3.21	—	3.1	0.006	0.68	0.0	0.04	25.33	0.00	2.127	7.99	0.00	4.5	95.4	0.1	-0.16	0.84	0.87	4.06	3.1	0.005	0.61	0.0	0.04	26.14	0.00	2.079	6.07	0.73	4.5	95.5	0.0	1.03	0.30	0.84	0.89	3.43	16319	1300	12	292	2	0	0	logfile
✔	7D6V	30594	2022-04-04	2020-10-02	2.53	2.74	—	2.7	0.031	1.56	2.0	0.50	14.53	0.01	2.186	9.51	0.00	9.6	90.3	0.1	-0.92	0.76	0.88	4.90	2.7	0.018	1.59	1.0	0.06	16.27	0.01	1.798	9.63	1.10	8.9	91.1	0.1	-0.37	0.30	0.73	0.90	4.10	8793	1104	6	0	7	0	0	logfile
✔	7EAZ	31047	2022-04-07	2021-03-08	3.5	4.16	—	4.0	0.003	0.60	0.0	0.05	13.88	0.00	2.146	8.23	0.00	5.3	94.7	0.0	-1.15	0.79	0.77	2.17	4.0	0.003	0.59	0.0	0.05	15.26	0.00	2.124	8.03	0.07	5.1	94.8	0.0	-0.76	0.30	0.81	0.79	2.00	24956	3051	38	0	82	0	0	logfile
✔	7EU7	31308	2022-04-06	2021-05-16	3.5	3.93	—	3.5	0.003	0.62	0.0	0.05	13.10	0.01	2.172	16.45	2.99	5.0	94.8	0.1	-0.02	0.83	0.83	2.68	3.4	0.002	0.53	0.0	0.04	13.49	0.00	2.183	7.70	0.00	4.7	95.3	0.0	0.13	0.30	0.84	0.85	2.39	21773	3134	8	0	25	0	0	logfile
✔	7EDJ	31073	2022-04-09	2021-03-16	3.3	3.90	—	3.8	0.005	0.66	0.0	0.05	14.54	0.00	2.085	8.50	0.09	7.9	91.9	0.2	-1.64	0.75	0.72	1.98	3.8	0.009	0.89	2.0	0.05	15.81	0.00	2.135	9.61	0.00	7.0	92.8	0.2	-1.31	0.30	0.75	0.72	1.59	39565	4836	40	0	84	0	0	logfile
✔	7ASM	11900	2022-04-08	2020-10-27	2.48	2.98	—	2.8	0.010	0.84	0.0	0.05	14.78	0.01	2.012	5.42	0.65	7.3	92.3	0.4	-3.05	0.89	0.91	4.54	2.8	0.005	0.65	0.0	0.04	15.00	0.01	2.064	5.35	2.29	6.6	93.3	0.1	-0.90	0.30	0.85	0.92	3.87	86149	3036	30	2949	1	0	0	logfile
✔	7PBW	13307	2022-04-04	2021-08-02	2.1	1.98	—	2.1	0.015	4.32	0.0	0.05	16.89	0.01	2.243	2.93	0.00	0.0	100.0	0.0	3.14	0.78	0.90	7.90	2.1	0.005	2.36	0.0	0.04	16.71	0.01	2.127	7.68	0.15	0.0	100.0	0.0	4.33	0.30	0.77	0.89	7.33	9500	873	54	0	81	230	0	logfile
✔	7RHK	24464	2022-04-05	2021-07-17	3.27	2.87	—	3.1	0.010	0.76	0.0	0.05	14.48	0.00	2.260	6.48	0.00	2.8	97.2	0.0	0.46	0.63	0.83	1.80	3.1	0.002	0.50	0.0	0.04	15.87	0.00	2.195	10.89	0.19	2.5	97.5	0.0	1.87	0.30	0.63	0.86	1.99	14682	1776	8	0	5	0	0	logfile
✔	7oD3	12818	2022-04-07	2021-04-28	2.8	2.59	3.00	2.7	0.004	0.58	0.0	0.05	13.89	0.00	1.953	2.55	0.23	4.8	95.2	0.0	-1.05	0.73	0.81	3.95	2.7	0.004	0.64	0.0	0.05	16.15	0.00	2.180	3.05	1.97	4.4	95.6	0.0	-0.52	0.30	0.75	0.84	3.83	24222	3036	6	0	36	0	0	logfile
✔	7CKB	30384	2022-04-05	2020-07-16	3.24	3.29	—	3.2	0.008	0.88	0.0	0.05	16.33	0.01	2.160	6.96	1.05	4.0	96.0	0.0	-0.87	0.85	0.88	2.17	3.2	0.005	0.70	0.0	0.05	17.12	0.00	2.156	7.09	1.40	2.5	97.5	0.0	-0.03	0.30	0.85	0.89	2.67	114840	15840	180	0	0	0	0	logfile
✔	7NJV	12424	2022-04-05	2021-02-17	2.9	2.81	—	2.9	0.003	0.60	0.0	0.04	13.24	0.00	2.179	6.55	0.00	2.5	97.5	0.0	2.26	0.65	0.88	2.67	2.9	0.004	0.49	0.0	0.04	15.43	0.00	2.132	5.27	0.91	2.0	98.0	0.0	2.71	0.30	0.65	0.90	2.63	16463	1118	13	0	1	0	8337	logfile
✔	7oQY	13034	2022-04-07	2021-06-04	2.61	2.96	2.55	2.9	0.020	0.88	0.0	0.20	13.68	0.00	1.842	4.99	0.00	2.9	97.1	0.0	-0.33	0.67	0.82	3.68	2.9	0.005	0.85	0.0	0.05	16.33	0.00	1.533	4.97	1.13	2.7	97.3	0.0	-0.11	0.30	0.67	0.83	3.37	28032	3535	20	0	10	0	0	logfile
✔	7M1P	23617	2022-04-05	2021-03-14	3.6	3.93	—	3.8	0.003	0.58	0.0	0.04	13.50	0.00	2.226	8.03	0.00	9.4	90.4	0.2	-0.96	0.68	0.74	1.70	3.9	0.010	1.10	1.0	0.04	15.12	0.01	2.166	9.45	0.27	9.5	90.4	0.1	-1.05	0.30	0.68	0.75	1.22	13511	1938	5	0	13	1	0	logfile
✔	7TL1	25983	2022-04-07	2022-01-18	3.5	3.79	3.47	3.6	0.003	0.66	0.0	0.05	11.12	0.01	2.302	3.28	0.00	3.6	96.4	0.0	-0.64	0.85	0.83	2.56	3.6	0.003	0.51	0.0	0.04	12.50	0.00	2.169	6.40	0.07	3.3	96.7	0.0	0.39	0.30	0.85	0.84	2.49	25109	3138	11	0	38	0	0	logfile
✔	7WBL	32405	2022-04-05	2021-12-17	3.4	3.46	—	3.5	0.004	0.58	0.0	0.04	15.30	0.00	2.158	6.79	0.72	3.6	96.1	0.4	0.52	0.67	0.77	2.33	3.4	0.008	1.05	0.0	0.04	16.94	0.00	2.152	5.84	0.14	3.4	96.4	0.1	0.99	0.30	0.69	0.80	1.72	6484	791	3	0	5	0	0	logfile

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