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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 7MU1 | 24001 | 2022-04-07 | 2021-05-14 | 3.3 | 3.26 | — | 3.2 | 0.006 | 0.65 | 0.0 | 0.04 | 13.49 | 0.00 | 2.078 | 13.19 | 0.43 | 3.4 | 96.6 | 0.0 | 0.09 | 0.86 | 0.88 | 3.31 | 3.2 | 0.003 | 0.54 | 0.0 | 0.04 | 15.31 | 0.00 | 2.274 | 7.34 | 0.00 | 4.4 | 95.6 | 0.0 | 1.01 | 0.29 | 0.87 | 0.91 | 2.98 | 132492 | 16104 | 61 | 0 | 61 | 0 | 0 | logfile |
✔ | 7V7F | 31769 | 2022-04-07 | 2021-08-21 | 2.9 | 3.82 | — | 3.2 | 0.004 | 0.56 | 0.0 | 0.05 | 13.42 | 0.00 | 2.061 | 7.24 | 0.00 | 5.1 | 94.7 | 0.1 | -0.13 | 0.88 | 0.86 | 2.44 | 3.2 | 0.005 | 0.58 | 0.0 | 0.05 | 14.94 | 0.00 | 2.108 | 8.16 | 1.51 | 5.7 | 94.2 | 0.1 | -0.14 | 0.29 | 0.89 | 0.87 | 2.25 | 25503 | 3114 | 42 | 0 | 84 | 0 | 0 | logfile |
✔ | 7M4Y | 23670 | 2022-04-09 | 2021-03-22 | 2.5 | 1.72 | — | 1.5 | 0.008 | 0.60 | 2.0 | 0.05 | 16.30 | 0.02 | 1.783 | 3.46 | 2.14 | 2.5 | 97.3 | 0.2 | 1.41 | 0.77 | 0.73 | 3.74 | 1.5 | 0.005 | 0.79 | 0.0 | 0.04 | 16.55 | 0.01 | 1.670 | 4.70 | 3.79 | 3.1 | 96.7 | 0.1 | 0.33 | 0.30 | 0.79 | 0.77 | 3.89 | 139817 | 5511 | 80 | 4453 | 200 | 1044 | 0 | logfile |
✔ | 7NNP | 12482 | 2022-04-05 | 2021-02-25 | 3.2 | 2.99 | 3.18 | 3.2 | 0.006 | 0.96 | 0.0 | 0.05 | 15.80 | 0.01 | 2.223 | 5.43 | 0.00 | 3.5 | 96.5 | 0.0 | -0.72 | 0.67 | 0.82 | 2.17 | 3.2 | 0.003 | 0.56 | 0.0 | 0.04 | 15.88 | 0.00 | 2.199 | 9.72 | 0.18 | 3.0 | 97.0 | 0.0 | 0.80 | 0.30 | 0.70 | 0.85 | 1.86 | 11096 | 1456 | 6 | 0 | 11 | 0 | 0 | logfile |
✔ | 7V7H | 31771 | 2022-04-09 | 2021-08-21 | 3.2 | 4.02 | — | 3.7 | 0.002 | 0.54 | 0.0 | 0.05 | 13.43 | 0.00 | 2.162 | 7.21 | 0.00 | 4.2 | 95.7 | 0.1 | -0.31 | 0.85 | 0.85 | 1.93 | 3.7 | 0.003 | 0.53 | 0.0 | 0.05 | 14.75 | 0.00 | 2.175 | 7.23 | 0.07 | 4.6 | 95.4 | 0.0 | -0.14 | 0.30 | 0.85 | 0.84 | 1.87 | 50949 | 6209 | 84 | 0 | 174 | 0 | 0 | logfile |
✔ | 7ENN | 31217 | 2022-04-05 | 2021-04-18 | 2.8 | 3.21 | — | 3.1 | 0.006 | 0.68 | 0.0 | 0.04 | 25.33 | 0.00 | 2.127 | 7.99 | 0.00 | 4.5 | 95.4 | 0.1 | -0.16 | 0.84 | 0.87 | 4.06 | 3.1 | 0.005 | 0.61 | 0.0 | 0.04 | 26.14 | 0.00 | 2.079 | 6.07 | 0.73 | 4.5 | 95.5 | 0.0 | 1.03 | 0.30 | 0.84 | 0.89 | 3.43 | 16319 | 1300 | 12 | 292 | 2 | 0 | 0 | logfile |
✔ | 7D6V | 30594 | 2022-04-04 | 2020-10-02 | 2.53 | 2.74 | — | 2.7 | 0.031 | 1.56 | 2.0 | 0.50 | 14.53 | 0.01 | 2.186 | 9.51 | 0.00 | 9.6 | 90.3 | 0.1 | -0.92 | 0.76 | 0.88 | 4.90 | 2.7 | 0.018 | 1.59 | 1.0 | 0.06 | 16.27 | 0.01 | 1.798 | 9.63 | 1.10 | 8.9 | 91.1 | 0.1 | -0.37 | 0.30 | 0.73 | 0.90 | 4.10 | 8793 | 1104 | 6 | 0 | 7 | 0 | 0 | logfile |
✔ | 7EAZ | 31047 | 2022-04-07 | 2021-03-08 | 3.5 | 4.16 | — | 4.0 | 0.003 | 0.60 | 0.0 | 0.05 | 13.88 | 0.00 | 2.146 | 8.23 | 0.00 | 5.3 | 94.7 | 0.0 | -1.15 | 0.79 | 0.77 | 2.17 | 4.0 | 0.003 | 0.59 | 0.0 | 0.05 | 15.26 | 0.00 | 2.124 | 8.03 | 0.07 | 5.1 | 94.8 | 0.0 | -0.76 | 0.30 | 0.81 | 0.79 | 2.00 | 24956 | 3051 | 38 | 0 | 82 | 0 | 0 | logfile |
✔ | 7EU7 | 31308 | 2022-04-06 | 2021-05-16 | 3.5 | 3.93 | — | 3.5 | 0.003 | 0.62 | 0.0 | 0.05 | 13.10 | 0.01 | 2.172 | 16.45 | 2.99 | 5.0 | 94.8 | 0.1 | -0.02 | 0.83 | 0.83 | 2.68 | 3.4 | 0.002 | 0.53 | 0.0 | 0.04 | 13.49 | 0.00 | 2.183 | 7.70 | 0.00 | 4.7 | 95.3 | 0.0 | 0.13 | 0.30 | 0.84 | 0.85 | 2.39 | 21773 | 3134 | 8 | 0 | 25 | 0 | 0 | logfile |
✔ | 7EDJ | 31073 | 2022-04-09 | 2021-03-16 | 3.3 | 3.90 | — | 3.8 | 0.005 | 0.66 | 0.0 | 0.05 | 14.54 | 0.00 | 2.085 | 8.50 | 0.09 | 7.9 | 91.9 | 0.2 | -1.64 | 0.75 | 0.72 | 1.98 | 3.8 | 0.009 | 0.89 | 2.0 | 0.05 | 15.81 | 0.00 | 2.135 | 9.61 | 0.00 | 7.0 | 92.8 | 0.2 | -1.31 | 0.30 | 0.75 | 0.72 | 1.59 | 39565 | 4836 | 40 | 0 | 84 | 0 | 0 | logfile |
✔ | 7ASM | 11900 | 2022-04-08 | 2020-10-27 | 2.48 | 2.98 | — | 2.8 | 0.010 | 0.84 | 0.0 | 0.05 | 14.78 | 0.01 | 2.012 | 5.42 | 0.65 | 7.3 | 92.3 | 0.4 | -3.05 | 0.89 | 0.91 | 4.54 | 2.8 | 0.005 | 0.65 | 0.0 | 0.04 | 15.00 | 0.01 | 2.064 | 5.35 | 2.29 | 6.6 | 93.3 | 0.1 | -0.90 | 0.30 | 0.85 | 0.92 | 3.87 | 86149 | 3036 | 30 | 2949 | 1 | 0 | 0 | logfile |
✔ | 7PBW | 13307 | 2022-04-04 | 2021-08-02 | 2.1 | 1.98 | — | 2.1 | 0.015 | 4.32 | 0.0 | 0.05 | 16.89 | 0.01 | 2.243 | 2.93 | 0.00 | 0.0 | 100.0 | 0.0 | 3.14 | 0.78 | 0.90 | 7.90 | 2.1 | 0.005 | 2.36 | 0.0 | 0.04 | 16.71 | 0.01 | 2.127 | 7.68 | 0.15 | 0.0 | 100.0 | 0.0 | 4.33 | 0.30 | 0.77 | 0.89 | 7.33 | 9500 | 873 | 54 | 0 | 81 | 230 | 0 | logfile |
✔ | 7RHK | 24464 | 2022-04-05 | 2021-07-17 | 3.27 | 2.87 | — | 3.1 | 0.010 | 0.76 | 0.0 | 0.05 | 14.48 | 0.00 | 2.260 | 6.48 | 0.00 | 2.8 | 97.2 | 0.0 | 0.46 | 0.63 | 0.83 | 1.80 | 3.1 | 0.002 | 0.50 | 0.0 | 0.04 | 15.87 | 0.00 | 2.195 | 10.89 | 0.19 | 2.5 | 97.5 | 0.0 | 1.87 | 0.30 | 0.63 | 0.86 | 1.99 | 14682 | 1776 | 8 | 0 | 5 | 0 | 0 | logfile |
✔ | 7oD3 | 12818 | 2022-04-07 | 2021-04-28 | 2.8 | 2.59 | 3.00 | 2.7 | 0.004 | 0.58 | 0.0 | 0.05 | 13.89 | 0.00 | 1.953 | 2.55 | 0.23 | 4.8 | 95.2 | 0.0 | -1.05 | 0.73 | 0.81 | 3.95 | 2.7 | 0.004 | 0.64 | 0.0 | 0.05 | 16.15 | 0.00 | 2.180 | 3.05 | 1.97 | 4.4 | 95.6 | 0.0 | -0.52 | 0.30 | 0.75 | 0.84 | 3.83 | 24222 | 3036 | 6 | 0 | 36 | 0 | 0 | logfile |
✔ | 7CKB | 30384 | 2022-04-05 | 2020-07-16 | 3.24 | 3.29 | — | 3.2 | 0.008 | 0.88 | 0.0 | 0.05 | 16.33 | 0.01 | 2.160 | 6.96 | 1.05 | 4.0 | 96.0 | 0.0 | -0.87 | 0.85 | 0.88 | 2.17 | 3.2 | 0.005 | 0.70 | 0.0 | 0.05 | 17.12 | 0.00 | 2.156 | 7.09 | 1.40 | 2.5 | 97.5 | 0.0 | -0.03 | 0.30 | 0.85 | 0.89 | 2.67 | 114840 | 15840 | 180 | 0 | 0 | 0 | 0 | logfile |
✔ | 7NJV | 12424 | 2022-04-05 | 2021-02-17 | 2.9 | 2.81 | — | 2.9 | 0.003 | 0.60 | 0.0 | 0.04 | 13.24 | 0.00 | 2.179 | 6.55 | 0.00 | 2.5 | 97.5 | 0.0 | 2.26 | 0.65 | 0.88 | 2.67 | 2.9 | 0.004 | 0.49 | 0.0 | 0.04 | 15.43 | 0.00 | 2.132 | 5.27 | 0.91 | 2.0 | 98.0 | 0.0 | 2.71 | 0.30 | 0.65 | 0.90 | 2.63 | 16463 | 1118 | 13 | 0 | 1 | 0 | 8337 | logfile |
✔ | 7oQY | 13034 | 2022-04-07 | 2021-06-04 | 2.61 | 2.96 | 2.55 | 2.9 | 0.020 | 0.88 | 0.0 | 0.20 | 13.68 | 0.00 | 1.842 | 4.99 | 0.00 | 2.9 | 97.1 | 0.0 | -0.33 | 0.67 | 0.82 | 3.68 | 2.9 | 0.005 | 0.85 | 0.0 | 0.05 | 16.33 | 0.00 | 1.533 | 4.97 | 1.13 | 2.7 | 97.3 | 0.0 | -0.11 | 0.30 | 0.67 | 0.83 | 3.37 | 28032 | 3535 | 20 | 0 | 10 | 0 | 0 | logfile |
✔ | 7M1P | 23617 | 2022-04-05 | 2021-03-14 | 3.6 | 3.93 | — | 3.8 | 0.003 | 0.58 | 0.0 | 0.04 | 13.50 | 0.00 | 2.226 | 8.03 | 0.00 | 9.4 | 90.4 | 0.2 | -0.96 | 0.68 | 0.74 | 1.70 | 3.9 | 0.010 | 1.10 | 1.0 | 0.04 | 15.12 | 0.01 | 2.166 | 9.45 | 0.27 | 9.5 | 90.4 | 0.1 | -1.05 | 0.30 | 0.68 | 0.75 | 1.22 | 13511 | 1938 | 5 | 0 | 13 | 1 | 0 | logfile |
✔ | 7TL1 | 25983 | 2022-04-07 | 2022-01-18 | 3.5 | 3.79 | 3.47 | 3.6 | 0.003 | 0.66 | 0.0 | 0.05 | 11.12 | 0.01 | 2.302 | 3.28 | 0.00 | 3.6 | 96.4 | 0.0 | -0.64 | 0.85 | 0.83 | 2.56 | 3.6 | 0.003 | 0.51 | 0.0 | 0.04 | 12.50 | 0.00 | 2.169 | 6.40 | 0.07 | 3.3 | 96.7 | 0.0 | 0.39 | 0.30 | 0.85 | 0.84 | 2.49 | 25109 | 3138 | 11 | 0 | 38 | 0 | 0 | logfile |
✔ | 7WBL | 32405 | 2022-04-05 | 2021-12-17 | 3.4 | 3.46 | — | 3.5 | 0.004 | 0.58 | 0.0 | 0.04 | 15.30 | 0.00 | 2.158 | 6.79 | 0.72 | 3.6 | 96.1 | 0.4 | 0.52 | 0.67 | 0.77 | 2.33 | 3.4 | 0.008 | 1.05 | 0.0 | 0.04 | 16.94 | 0.00 | 2.152 | 5.84 | 0.14 | 3.4 | 96.4 | 0.1 | 0.99 | 0.30 | 0.69 | 0.80 | 1.72 | 6484 | 791 | 3 | 0 | 5 | 0 | 0 | logfile |