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Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 7W37 | 32272 | 2023-12-07 | 2021-11-25 | 3.0 | 4.26 | — | 2.8 | 0.004 | 0.80 | 0.0 | 0.05 | 14.12 | 0.01 | 1.712 | 5.02 | 0.15 | 5.8 | 94.1 | 0.1 | -0.60 | 0.85 | 0.84 | 2.30 | 2.8 | 0.004 | 0.64 | 0.0 | 0.04 | 15.50 | 0.00 | 1.820 | 10.49 | 0.94 | 6.3 | 93.7 | 0.1 | 0.77 | 0.35 | 0.88 | 0.89 | 1.99 | 106025 | 13527 | 54 | 0 | 13 | 0 | 0 | logfile |
✔ | 6MSD | 9217 | 2023-12-07 | 2018-10-16 | 3.2 | 3.65 | — | 3.0 | 0.007 | 1.05 | 2.0 | 0.06 | 11.65 | 0.01 | 2.019 | 5.69 | 0.50 | 8.3 | 91.5 | 0.3 | -5.07 | 0.84 | 0.81 | 2.24 | 3.0 | 0.003 | 0.73 | 0.0 | 0.04 | 14.31 | 0.00 | 1.930 | 12.43 | 0.28 | 7.4 | 92.6 | 0.1 | -0.73 | 1.04 | 0.85 | 0.85 | 1.77 | 105426 | 13526 | 55 | 0 | 12 | 0 | 0 | logfile |
✔ | 6J2Q | 9771 | 2023-12-07 | 2019-01-02 | 3.8 | 3.95 | — | 3.9 | 0.002 | 0.40 | 0.0 | 0.04 | 7.17 | 0.00 | 2.202 | 6.58 | 0.00 | 5.5 | 94.4 | 0.1 | -3.50 | 0.77 | 0.68 | 0.88 | 3.9 | 0.003 | 0.74 | 0.0 | 0.04 | 15.50 | 0.00 | 2.058 | 15.76 | 0.38 | 4.1 | 95.8 | 0.1 | -0.48 | 2.27 | 0.82 | 0.76 | 1.06 | 106311 | 13518 | 47 | 0 | 0 | 0 | 0 | logfile |
✔ | 6J30 | 9773 | 2023-12-07 | 2019-01-03 | 4.5 | 4.74 | — | 4.6 | 0.002 | 0.44 | 0.0 | 0.04 | 7.35 | 0.00 | 2.093 | 8.60 | 0.07 | 6.4 | 93.4 | 0.3 | -3.38 | 0.86 | 0.72 | — | 4.5 | 0.004 | 0.76 | 0.0 | 0.04 | 12.18 | 0.00 | 1.918 | 21.54 | 0.01 | 5.4 | 94.4 | 0.2 | -0.88 | 1.91 | 0.89 | 0.77 | — | 106227 | 13504 | 47 | 0 | 0 | 0 | 0 | logfile |
✔ | 6PEM | 20316 | 2023-12-08 | 2019-06-20 | 3.5 | 3.59 | — | 3.5 | 0.007 | 0.93 | 1.0 | 0.06 | 13.99 | 0.01 | 2.238 | 2.98 | 0.39 | 3.5 | 96.4 | 0.0 | -5.10 | 0.82 | 0.89 | 2.08 | 3.5 | 0.003 | 0.62 | 0.0 | 0.04 | 15.86 | 0.00 | 2.154 | 5.92 | 0.37 | 3.6 | 96.4 | 0.0 | -0.21 | 1.78 | 0.82 | 0.88 | 1.75 | 108033 | 13503 | 74 | 0 | 0 | 0 | 0 | logfile |
✔ | 6J2X | 9772 | 2023-12-07 | 2019-01-03 | 3.8 | 3.99 | — | 3.9 | 0.002 | 0.40 | 0.0 | 0.04 | 7.12 | 0.00 | 2.220 | 6.65 | 0.00 | 5.8 | 94.1 | 0.1 | -3.52 | 0.80 | 0.70 | 0.49 | 3.9 | 0.004 | 0.78 | 1.0 | 0.04 | 15.31 | 0.00 | 2.050 | 18.52 | 0.40 | 4.7 | 95.2 | 0.1 | -0.69 | 1.88 | 0.84 | 0.78 | 0.88 | 106176 | 13501 | 47 | 0 | 0 | 0 | 0 | logfile |
✔ | 7B0U | 11971 | 2023-12-07 | 2020-11-22 | 3.86 | 4.15 | — | 4.1 | 0.004 | 0.71 | 4.0 | 0.04 | 12.48 | 0.00 | 2.196 | 16.72 | 0.54 | 5.8 | 94.2 | 0.0 | -0.21 | 0.66 | 0.74 | 0.48 | 4.1 | 0.004 | 0.70 | 0.0 | 0.04 | 14.96 | 0.00 | 2.096 | 18.38 | 0.41 | 6.8 | 93.2 | 0.0 | -0.05 | 0.46 | 0.67 | 0.75 | 0.50 | 105492 | 13320 | 60 | 0 | 0 | 0 | 0 | logfile |
✔ | 8EET | 28057 | 2023-12-07 | 2022-09-07 | 3.1 | 3.36 | 3.21 | 3.4 | 0.007 | 0.92 | 0.0 | 0.06 | 12.42 | 0.00 | 0.312 | 9.93 | 1.07 | 0.5 | 99.5 | 0.0 | 1.87 | 0.72 | 0.82 | 3.55 | 3.4 | 0.037 | 2.68 | 0.0 | 0.26 | 21.44 | 0.00 | 0.591 | 11.72 | 0.12 | 1.0 | 99.0 | 0.0 | 2.41 | 1.30 | 0.66 | 0.80 | 2.54 | 107640 | 13260 | 60 | 0 | 120 | 0 | 0 | logfile |
✔ | 8EEP | 28054 | 2023-12-08 | 2022-09-07 | 2.2 | 2.31 | 2.33 | 2.3 | 0.004 | 1.00 | 0.0 | 0.71 | 22.11 | 0.00 | 0.286 | 7.98 | 1.59 | 0.0 | 100.0 | 0.0 | 1.98 | 0.74 | 0.81 | 4.21 | 2.3 | 0.033 | 1.73 | 0.0 | 0.12 | 19.27 | 0.01 | 1.901 | 9.78 | 1.53 | 1.0 | 99.0 | 0.0 | 1.36 | 1.38 | 0.74 | 0.82 | 3.94 | 108060 | 13260 | 60 | 0 | 120 | 0 | 0 | logfile |
✔ | 7URT | 26718 | 2023-12-07 | 2022-04-22 | 2.39 | 2.51 | 2.52 | 2.5 | 0.008 | 0.96 | 0.0 | 0.07 | 13.99 | 0.01 | 0.512 | 6.62 | 1.60 | 0.9 | 99.1 | 0.0 | 1.22 | 0.71 | 0.82 | 4.21 | 2.5 | 0.038 | 3.42 | 10.0 | 0.29 | 25.44 | 0.01 | 0.460 | 10.66 | 1.28 | 1.5 | 98.5 | 0.0 | 1.89 | 1.11 | 0.69 | 0.81 | 2.66 | 107880 | 13260 | 60 | 0 | 120 | 0 | 0 | logfile |
✔ | 6V6S | 21073 | 2023-12-07 | 2019-12-05 | 4.3 | 3.91 | — | 3.8 | 0.006 | 0.75 | 1.0 | 0.05 | 13.81 | 0.00 | 2.102 | 10.50 | 0.63 | 5.0 | 94.9 | 0.1 | -4.11 | 0.58 | 0.50 | — | 3.8 | 0.003 | 0.69 | 0.0 | 0.04 | 13.90 | 0.00 | 2.137 | 9.65 | 0.07 | 3.5 | 96.5 | 0.0 | 0.10 | 1.08 | 0.58 | 0.55 | — | 106422 | 13155 | 53 | 14 | 721 | 0 | 0 | logfile |
✔ | 7Z13 | 14439 | 2023-12-07 | 2022-02-24 | 3.4 | 3.29 | — | 3.3 | 0.003 | 0.66 | 2.0 | 0.04 | 15.96 | 0.00 | 1.997 | 7.26 | 0.13 | 3.8 | 96.1 | 0.0 | -0.12 | 0.66 | 0.78 | 2.01 | 3.3 | 0.003 | 0.60 | 0.0 | 0.04 | 17.74 | 0.00 | 2.012 | 7.25 | 0.21 | 3.9 | 96.1 | 0.0 | 0.45 | 0.48 | 0.63 | 0.80 | 1.66 | 107381 | 13128 | 42 | 106 | 32 | 0 | 0 | logfile |
✔ | 8CEo | 16611 | 2023-12-09 | 2023-02-02 | 3.6 | 3.26 | 3.48 | 2.9 | 0.004 | 0.75 | 1.0 | 0.05 | 16.42 | 0.01 | 2.091 | 6.70 | 0.00 | 2.9 | 97.1 | 0.0 | -0.68 | 0.73 | 0.56 | 1.54 | 2.9 | 0.007 | 0.71 | 0.0 | 0.04 | 17.82 | 0.00 | 1.837 | 15.77 | 0.16 | 3.5 | 96.5 | 0.0 | 0.35 | 0.67 | 0.68 | 0.52 | 1.47 | 113584 | 13074 | 66 | 418 | 19 | 0 | 0 | logfile |
✔ | 7K0S | 22615 | 2023-12-09 | 2020-09-05 | 4.5 | 4.73 | 4.68 | 4.6 | 0.003 | 0.64 | 2.0 | 0.04 | 14.04 | 0.00 | 2.069 | 9.69 | 0.95 | 7.8 | 92.0 | 0.2 | -0.12 | 0.80 | 0.73 | — | 4.6 | 0.043 | 3.17 | 223.0 | 0.13 | 17.19 | 0.02 | 1.395 | 136.01 | 0.02 | 44.5 | 52.1 | 3.4 | -7.53 | 2.27 | 0.84 | 0.82 | — | 115935 | 12896 | 8 | 0 | 3557 | 0 | 0 | logfile |
✘ | 5ZWM | 6972 | 2023-12-08 | 2018-05-16 | 3.4 | 3.37 | — | 3.3 | 0.007 | 1.15 | 10.0 | 0.06 | 14.46 | 0.01 | 1.786 | 18.95 | 0.72 | 5.9 | 93.5 | 0.6 | -3.22 | 0.51 | 0.43 | 1.06 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 111041 | 12858 | 61 | 634 | 8 | 0 | 0 | logfile |
✘ | 5GM6 | 9524 | 2023-12-08 | 2016-07-12 | 3.5 | 3.61 | — | 3.6 | 0.012 | 1.33 | 11.0 | 0.08 | 14.71 | 0.01 | 1.303 | 18.95 | 3.36 | 6.6 | 92.1 | 1.2 | -3.54 | 0.58 | 0.83 | 2.50 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 112064 | 12796 | 55 | 361 | 881 | 0 | 0 | logfile |
✘ | 3J8H | 2807 | 2023-12-08 | 2014-10-26 | 3.8 | 3.95 | — | 3.8 | 0.006 | 1.31 | 4.0 | 0.05 | 10.89 | 0.01 | 1.488 | 33.49 | 2.47 | 5.3 | 92.8 | 1.9 | -2.06 | 0.65 | 0.64 | 1.52 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 111160 | 12796 | 12 | 0 | 2276 | 0 | 0 | logfile |
✔ | 8UH4 | 42246 | 2023-12-08 | 2023-10-06 | 3.72 | 4.54 | 4.34 | 4.4 | 0.008 | 0.78 | 0.0 | 0.05 | 15.20 | 0.01 | 2.146 | 13.85 | 0.00 | 2.4 | 97.2 | 0.5 | -2.44 | 0.80 | 0.84 | 3.98 | 4.4 | 0.006 | 0.81 | 0.0 | 0.04 | 18.31 | 0.00 | 2.047 | 15.50 | 0.94 | 4.7 | 95.3 | 0.0 | -1.53 | 0.69 | 0.76 | 0.79 | 3.20 | 110100 | 12780 | 120 | 540 | 0 | 0 | 0 | logfile |
✔ | 7B9V | 12106 | 2023-12-08 | 2020-12-14 | 2.8 | 2.94 | — | 2.9 | 0.010 | 1.40 | 6.0 | 0.10 | 16.14 | 0.01 | 1.604 | 0.26 | 0.17 | 2.5 | 97.4 | 0.1 | -0.42 | 0.51 | 0.65 | 2.27 | 2.9 | 0.003 | 0.70 | 0.0 | 0.04 | 17.98 | 0.00 | 1.878 | 10.38 | 2.26 | 2.5 | 97.5 | 0.0 | 1.03 | 0.72 | 0.57 | 0.71 | 1.78 | 109105 | 12183 | 58 | 545 | 150 | 0 | 0 | logfile |
✘ | 6SG9 | 10175 | 2023-12-07 | 2019-08-03 | 3.1 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 104694 | 11989 | 60 | 146 | 837 | 3 | 0 | logfile |