The table shows a selection of parameters. Activate more columns using
the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 7LiT | 23385 | 2023-08-17 | 2021-01-27 | 2.53 | 2.69 | — | 2.8 | 0.008 | 0.76 | 0.0 | 0.05 | 13.58 | 0.00 | 2.309 | 1.69 | 0.44 | 3.9 | 96.1 | 0.0 | 0.35 | 0.71 | 0.85 | 4.23 | 2.7 | 0.003 | 0.55 | 0.0 | 0.04 | 16.23 | 0.00 | 2.168 | 2.50 | 1.36 | 3.3 | 96.7 | 0.0 | 0.89 | 1.75 | 0.73 | 0.88 | 3.70 | 126840 | 15480 | 60 | 0 | 60 | 0 | 0 | logfile |
✔ | 7Lii | 23379 | 2023-08-17 | 2021-01-27 | 3.55 | 3.83 | — | 3.7 | 0.007 | 0.90 | 0.0 | 0.06 | 13.86 | 0.00 | 2.299 | 5.65 | 0.87 | 9.9 | 90.1 | 0.0 | -2.72 | 0.82 | 0.84 | 2.16 | 3.7 | 0.006 | 0.75 | 0.0 | 0.05 | 15.30 | 0.00 | 2.260 | 3.23 | 0.42 | 10.3 | 89.7 | 0.0 | -2.13 | 0.35 | 0.83 | 0.84 | 1.83 | 127320 | 15480 | 60 | 0 | 60 | 0 | 0 | logfile |
✔ | 7LiM | 23383 | 2023-08-17 | 2021-01-27 | 2.75 | 2.92 | — | 2.9 | 0.007 | 1.05 | 60.0 | 0.06 | 15.45 | 0.01 | 2.436 | 3.47 | 3.49 | 3.5 | 96.5 | 0.0 | -2.97 | 0.74 | 0.84 | 3.83 | 3.0 | 0.005 | 0.87 | 0.0 | 0.05 | 18.05 | 0.01 | 2.272 | 3.74 | 2.40 | 3.8 | 96.2 | 0.0 | -2.46 | 0.30 | 0.75 | 0.86 | 2.97 | 127440 | 15480 | 60 | 0 | 60 | 0 | 0 | logfile |
✔ | 8HC1 | 34648 | 2023-08-14 | 2022-11-01 | 2.3 | 2.91 | 2.33 | 2.6 | 0.005 | 0.50 | 0.0 | 0.04 | 15.03 | 0.00 | 2.168 | 6.79 | 0.69 | 3.1 | 96.9 | 0.0 | 0.95 | 0.82 | 0.87 | 4.32 | 2.6 | 0.004 | 0.57 | 0.0 | 0.04 | 16.18 | 0.00 | 2.146 | 8.55 | 1.34 | 3.2 | 96.8 | 0.0 | 1.03 | 0.38 | 0.82 | 0.89 | 4.19 | 120048 | 15468 | 48 | 0 | 0 | 0 | 0 | logfile |
✘ | 6SGA | 10177 | 2023-08-22 | 2019-08-03 | 3.1 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 137038 | 15423 | 77 | 463 | 790 | 0 | 0 | logfile |
✔ | 6WKV | 21810 | 2023-08-17 | 2020-04-17 | 2.99 | 2.74 | — | 2.9 | 0.012 | 0.66 | 0.0 | 0.06 | 16.80 | 0.00 | 2.116 | 10.99 | 3.10 | 6.7 | 93.3 | 0.0 | -4.68 | 0.81 | 0.85 | 3.88 | 2.9 | 0.004 | 0.61 | 0.0 | 0.04 | 18.38 | 0.00 | 2.132 | 4.53 | 1.55 | 3.0 | 97.0 | 0.0 | -0.48 | 1.16 | 0.82 | 0.87 | 3.03 | 126600 | 15420 | 108 | 0 | 60 | 0 | 0 | logfile |
✔ | 7AM2 | 11821 | 2023-08-23 | 2020-10-07 | 3.4 | 3.52 | — | 3.4 | 0.009 | 0.95 | 43.0 | 0.07 | 20.01 | 0.01 | 1.157 | 23.90 | 8.65 | 15.0 | 84.3 | 0.7 | -5.47 | 0.64 | 0.76 | 1.98 | 3.4 | 0.007 | 0.82 | 1.0 | 0.05 | 19.90 | 0.01 | 1.363 | 20.07 | 0.72 | 12.6 | 87.2 | 0.2 | -3.08 | 1.82 | 0.64 | 0.78 | 1.80 | 139523 | 15384 | 80 | 839 | 42 | 0 | 0 | logfile |
✔ | 7E80 | 31006 | 2023-08-12 | 2021-02-28 | 3.67 | 4.02 | — | 3.9 | 0.003 | 0.50 | 4.0 | 0.04 | 10.46 | 0.00 | 2.066 | 8.31 | 1.97 | 4.4 | 95.6 | 0.0 | 0.97 | 0.74 | 0.84 | 1.76 | 3.9 | 0.002 | 0.63 | 0.0 | 0.04 | 13.63 | 0.00 | 2.096 | 10.56 | 0.23 | 3.9 | 96.1 | 0.0 | 0.89 | 0.46 | 0.73 | 0.84 | 1.58 | 114468 | 15296 | 77 | 0 | 75 | 0 | 0 | logfile |
✘ | 7DCo | 30637 | 2023-08-18 | 2020-10-26 | 2.5 | 2.59 | — | 2.6 | 0.010 | 1.11 | 8.0 | 0.08 | 13.06 | 0.01 | 2.079 | 5.90 | 1.87 | 4.4 | 95.1 | 0.5 | -3.91 | 0.53 | 0.65 | 3.00 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 129875 | 15294 | 91 | 556 | 24 | 1714 | 0 | logfile |
✘ | 5YZG | 6864 | 2023-08-26 | 2017-12-14 | 4.1 | 4.23 | 4.20 | 4.1 | 0.016 | 1.80 | 42.0 | 0.12 | 16.14 | 0.01 | 1.129 | 26.62 | 8.31 | 4.8 | 93.5 | 1.7 | -1.79 | 0.57 | 0.56 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 103906 | 15211 | 63 | 408 | 19 | 0 | 0 | logfile |
✔ | 7QoG | 14089 | 2023-08-16 | 2021-12-24 | 3.09 | 3.06 | — | 3.1 | 0.008 | 0.89 | 0.0 | 0.06 | 15.01 | 0.01 | 2.194 | 7.17 | 0.27 | 2.9 | 97.1 | 0.0 | -3.72 | 0.64 | 0.85 | 3.38 | 3.1 | 0.004 | 0.62 | 0.0 | 0.04 | 16.96 | 0.00 | 2.133 | 9.22 | 0.32 | 2.2 | 97.8 | 0.0 | 1.40 | 0.47 | 0.63 | 0.86 | 2.75 | 123492 | 15192 | 60 | 0 | 0 | 0 | 0 | logfile |
✔ | 8HR7 | 34962 | 2023-08-15 | 2022-12-15 | 3.96 | 4.06 | 4.11 | 3.9 | 0.002 | 0.52 | 0.0 | 0.04 | 14.32 | 0.00 | 1.995 | 11.90 | 0.07 | 3.6 | 96.4 | 0.0 | -0.25 | 0.74 | 0.76 | 1.48 | 3.9 | 0.005 | 0.67 | 0.0 | 0.04 | 16.33 | 0.00 | 2.011 | 16.92 | 0.32 | 5.8 | 94.2 | 0.0 | 0.03 | 1.11 | 0.74 | 0.77 | 1.28 | 121662 | 15154 | 19 | 0 | 0 | 0 | 0 | logfile |
✔ | 7PK6 | 13466 | 2023-08-14 | 2021-08-25 | 2.15 | 2.27 | 2.23 | 2.3 | 0.005 | 0.60 | 0.0 | 0.05 | 17.06 | 0.01 | 1.864 | 4.25 | 2.22 | 2.0 | 98.0 | 0.0 | 1.43 | 0.73 | 0.77 | 4.80 | 2.2 | 0.003 | 0.55 | 0.0 | 0.04 | 17.46 | 0.00 | 2.152 | 6.42 | 2.12 | 2.2 | 97.8 | 0.0 | 1.53 | 0.87 | 0.78 | 0.88 | 4.85 | 120580 | 15100 | 20 | 0 | 0 | 0 | 0 | logfile |
✘ | 5GKY | 9518 | 2023-08-11 | 2016-07-07 | 3.8 | 4.18 | — | 4.0 | 0.017 | 1.70 | 19.0 | 0.10 | 11.29 | 0.01 | 1.789 | 19.04 | 0.51 | 5.8 | 91.8 | 2.5 | -2.71 | 0.73 | 0.79 | 1.53 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 111036 | 15068 | 12 | 0 | 4 | 0 | 0 | logfile |
✘ | 5GL0 | 9520 | 2023-08-11 | 2016-07-07 | 4.2 | 4.40 | — | 4.2 | 0.018 | 1.72 | 17.0 | 0.10 | 11.34 | 0.01 | 1.957 | 21.25 | 0.51 | 6.5 | 90.6 | 2.9 | -2.58 | 0.74 | 0.81 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 111000 | 15068 | 12 | 0 | 4 | 0 | 0 | logfile |
✘ | 5GKZ | 9519 | 2023-08-11 | 2016-07-07 | 4.0 | 4.10 | — | 4.0 | 0.019 | 1.71 | 36.0 | 0.11 | 11.29 | 0.01 | 1.755 | 15.04 | 0.51 | 6.5 | 91.2 | 2.3 | -2.89 | 0.72 | 0.82 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 111000 | 15068 | 12 | 0 | 4 | 0 | 0 | logfile |
✘ | 6JiY | 9837 | 2023-08-12 | 2019-02-24 | 3.9 | 4.05 | — | 3.9 | 0.008 | 1.06 | 1.0 | 0.05 | 15.49 | 0.01 | 2.203 | 7.76 | 0.47 | 12.2 | 87.5 | 0.2 | -5.76 | 0.73 | 0.78 | 1.40 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 115288 | 15056 | 20 | 0 | 32 | 0 | 0 | logfile |
✘ | 6Ji8 | 9833 | 2023-08-12 | 2019-02-20 | 3.6 | 3.80 | — | 3.7 | 0.010 | 1.26 | 8.0 | 0.06 | 11.98 | 0.01 | 2.196 | 8.60 | 1.03 | 10.5 | 89.0 | 0.5 | -4.77 | 0.73 | 0.77 | 2.30 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 115060 | 15024 | 16 | 0 | 4 | 0 | 0 | logfile |
✘ | 6Jii | 9834 | 2023-08-12 | 2019-02-21 | 4.2 | 4.38 | — | 4.1 | 0.008 | 1.12 | 0.0 | 0.06 | 11.41 | 0.01 | 2.208 | 7.63 | 0.57 | 11.2 | 88.4 | 0.4 | -4.07 | 0.78 | 0.79 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 115028 | 15012 | 16 | 0 | 16 | 0 | 0 | logfile |
✔ | 7AS4 | 11888 | 2023-08-14 | 2020-10-26 | 4.13 | 7.60 | 4.43 | 3.3 | 0.013 | 2.07 | 101.0 | 0.12 | 16.75 | 0.01 | 1.851 | 7.04 | 3.73 | 5.2 | 94.7 | 0.1 | -1.41 | 0.79 | 0.59 | — | 3.2 | 0.004 | 0.72 | 0.0 | 0.04 | 14.57 | 0.00 | 2.025 | 16.07 | 0.00 | 4.3 | 95.7 | 0.0 | 0.26 | 0.80 | 0.88 | 0.70 | — | 120779 | 14997 | 47 | 14 | 0 | 0 | 0 | logfile |