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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✘ | 8DUL | 27722 | 2023-12-10 | 2022-07-27 | 4.17 | 4.34 | 4.24 | 4.7 | 0.005 | 1.04 | 0.0 | 0.07 | 13.09 | 0.02 | 2.317 | 6.11 | 0.06 | 5.3 | 94.7 | 0.0 | -2.03 | 0.56 | 0.49 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 14203 | 1802 | 15 | 0 | 10 | 0 | 0 | logfile |
✘ | 7YVL | 34131 | 2023-12-07 | 2022-08-19 | 3.3 | 3.44 | 3.21 | 3.4 | 0.011 | 1.16 | 5.0 | 0.07 | 12.98 | 0.01 | 2.155 | 18.66 | 1.42 | 9.0 | 90.6 | 0.5 | -4.93 | 0.57 | 0.77 | 1.24 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 3224 | 419 | 3 | 0 | 0 | 0 | 0 | logfile |
✘ | 7SAR | 24954 | 2023-12-09 | 2021-09-23 | 3.2 | 3.05 | — | 3.5 | 0.005 | 0.80 | 0.0 | 0.07 | 13.63 | 0.01 | 2.157 | 15.13 | 0.00 | 11.3 | 88.7 | 0.0 | -3.51 | 0.50 | 0.76 | 3.18 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 11420 | 1350 | 20 | 0 | 40 | 0 | 0 | logfile |
✘ | 8T6V | 41082 | 2023-12-08 | 2023-06-18 | 2.95 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 8686 | 1032 | 8 | 0 | 16 | 64 | 0 | logfile |
✘ | 8P98 | 17575 | 2023-12-08 | 2023-06-05 | 2.97 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 7830 | 956 | 3 | 0 | 1 | 0 | 0 | logfile |
✘ | 8E2U | 27846 | 2023-12-10 | 2022-08-16 | 3.48 | 3.78 | 3.51 | 3.9 | 0.006 | 0.97 | 0.0 | 0.05 | 14.01 | 0.01 | 2.162 | 4.01 | 0.94 | 8.2 | 91.4 | 0.3 | -2.08 | 0.71 | 0.78 | 2.50 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 13228 | 880 | 3 | 0 | 0 | 0 | 6581 | logfile |
✘ | 8iV5 | 35741 | 2023-12-07 | 2023-03-26 | 3.77 | 3.99 | 3.73 | 4.0 | 0.007 | 0.88 | 0.0 | 0.06 | 13.87 | 0.01 | 2.297 | 5.11 | 0.91 | 7.9 | 92.1 | 0.0 | -3.73 | 0.48 | 0.70 | 2.79 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 5096 | 645 | 6 | 0 | 3 | 0 | 0 | logfile |
✘ | 8GNB | 34159 | 2023-12-10 | 2022-08-23 | 3.9 | 5.27 | 4.76 | 5.1 | 0.004 | 0.94 | 0.0 | 0.05 | 12.92 | 0.01 | 2.231 | 14.24 | 0.00 | 5.1 | 94.9 | 0.0 | -0.65 | 0.53 | 0.62 | 0.52 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 15770 | 2010 | 10 | 0 | 0 | 0 | 0 | logfile |
✘ | 6LN6 | 0925 | 2023-12-08 | 2019-12-28 | 2.9 | 3.03 | 2.87 | 3.0 | 0.005 | 0.64 | 0.0 | 0.04 | 12.49 | 0.00 | 2.035 | 6.53 | 0.00 | 2.0 | 98.0 | 0.0 | -3.94 | 0.65 | 0.82 | 3.55 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 7836 | 1010 | 1 | 0 | 4 | 0 | 0 | logfile |
✘ | 8iWX | 35782 | 2023-12-08 | 2023-03-31 | 2.59 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 8238 | 654 | 6 | 0 | 57 | 0 | 0 | logfile |
✘ | 8BQV | 16188 | 2023-12-08 | 2023-01-18 | 2.0 | 1.96 | 1.89 | 1.9 | 0.008 | 1.01 | 0.0 | 0.07 | 8.75 | 0.00 | 0.000 | 15.01 | 0.00 | 6.8 | 93.2 | 0.0 | -2.59 | 0.54 | 0.77 | 8.69 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 8595 | 1155 | 45 | 0 | 105 | 120 | 0 | logfile |
✘ | 8i5Y | 35198 | 2023-12-10 | 2023-01-26 | 2.6 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 13617 | 1565 | 9 | 0 | 39 | 6 | 0 | logfile |
✘ | 8AN3 | 15531 | 2023-12-08 | 2022-08-04 | 3.9 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | logfile |
✘ | 8HKU | 34860 | 2023-12-07 | 2022-11-28 | 2.72 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | logfile |
✘ | 8EiR | 28162 | 2023-12-07 | 2022-09-15 | 2.49 | 3.15 | 2.50 | 3.0 | 0.005 | 0.81 | 0.0 | 0.05 | 16.40 | 0.01 | 1.960 | 4.05 | 2.61 | 2.2 | 97.4 | 0.3 | -1.27 | 0.86 | 0.84 | 4.26 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 4870 | 632 | 4 | 0 | 0 | 0 | 0 | logfile |
✘ | 8BLP | 16112 | 2023-12-08 | 2022-11-10 | 2.6 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 9378 | 1065 | 9 | 0 | 66 | 66 | 0 | logfile |
✘ | 8JT9 | 36637 | 2023-12-07 | 2023-06-21 | 2.97 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 2872 | 384 | 2 | 0 | 1 | 0 | 0 | logfile |
✘ | 7EJ6 | 31153 | 2023-12-08 | 2021-04-01 | 3.21 | 3.47 | — | 3.3 | 0.008 | 1.03 | 1.0 | 0.05 | 16.92 | 0.00 | 2.019 | 51.68 | 1.13 | 12.1 | 87.2 | 0.7 | -4.78 | 0.59 | 0.89 | 2.78 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 7584 | 948 | 7 | 9 | 6 | 0 | 0 | logfile |
✘ | 7X76 | 33033 | 2023-12-09 | 2022-03-09 | 3.67 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 64334 | 3793 | 18 | 168 | 15 | 0 | 31436 | logfile |
✘ | 6VDK | 21151 | 2023-12-09 | 2019-12-27 | 4.5 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 12309 | 1274 | 14 | 104 | 6 | 0 | 0 | logfile |