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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✘ | 6SAG | 10130 | 2024-03-10 | 2019-07-16 | 2.0 | 2.11 | 2.01 | 2.1 | 0.004 | 0.65 | 0.0 | 0.04 | 13.90 | 0.00 | 0.351 | 2.79 | 0.00 | 2.6 | 97.4 | 0.0 | -0.33 | 0.58 | 0.86 | 6.64 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 54080 | 6120 | 240 | 120 | 240 | 2840 | 0 | logfile |
✘ | 6XXD | 10647 | 2024-03-16 | 2020-01-27 | 3.22 | 2.31 | — | 3.1 | 0.007 | 1.05 | 0.0 | 0.06 | 11.45 | 0.00 | 2.647 | 2.40 | 0.00 | 5.7 | 94.3 | 0.0 | -2.51 | 0.70 | 0.68 | 2.67 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 14896 | 2000 | 16 | 0 | 0 | 0 | 0 | logfile |
✘ | 6TU7 | 10590 | 2024-03-19 | 2020-01-03 | 3.1 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | logfile |
✘ | 8FCL | 28982 | 2024-03-23 | 2022-12-01 | 3.51 | 3.89 | 3.72 | 3.9 | 0.011 | 0.87 | 0.0 | 0.06 | 12.28 | 0.00 | 2.300 | 0.67 | 0.10 | 1.8 | 98.2 | 0.0 | 0.35 | 0.67 | 0.63 | 1.49 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 36904 | 4667 | 13 | 0 | 12 | 0 | 0 | logfile |
✘ | 8i5X | 35197 | 2024-03-16 | 2023-01-26 | 2.9 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 13590 | 1565 | 8 | 0 | 35 | 0 | 0 | logfile |
✘ | 8FCA | 28978 | 2024-03-23 | 2022-12-01 | 3.41 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 35936 | 2400 | 8 | 0 | 8 | 0 | 17476 | logfile |
✘ | 8i5Y | 35198 | 2024-03-16 | 2023-01-26 | 2.6 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 13617 | 1565 | 9 | 0 | 39 | 6 | 0 | logfile |
✘ | 6N1i | 8903 | 2024-03-15 | 2018-11-08 | 3.58 | 3.63 | — | 3.6 | 0.009 | 1.13 | 0.0 | 0.06 | 9.87 | 0.01 | 1.147 | 27.10 | 0.00 | 2.4 | 97.6 | 0.0 | -6.04 | 0.42 | 0.58 | 0.05 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 11136 | 1360 | 16 | 0 | 0 | 0 | 0 | logfile |
✘ | 8T1B | 40958 | 2024-03-19 | 2023-06-02 | 3.0 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 23180 | 2576 | 12 | 0 | 52 | 72 | 0 | logfile |
✘ | 8JPo | 36485 | 2024-03-15 | 2023-06-12 | 3.4 | 3.43 | 3.16 | 3.4 | 0.004 | 0.63 | 0.0 | 0.04 | 12.94 | 0.00 | 2.267 | 6.38 | 0.00 | 2.8 | 97.2 | 0.0 | 0.44 | 0.75 | 0.90 | 3.16 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 11476 | 1466 | 4 | 0 | 8 | 0 | 0 | logfile |
✘ | 8S8Z | 40232 | 2024-03-17 | 2023-03-27 | 3.91 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 15707 | 2096 | 16 | 0 | 9 | 0 | 0 | logfile |
✘ | 8JT9 | 36637 | 2024-03-10 | 2023-06-21 | 2.97 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 2872 | 384 | 2 | 0 | 1 | 0 | 0 | logfile |
✘ | 8J1Q | 35930 | 2024-03-10 | 2023-04-13 | 3.3 | 4.10 | 3.20 | 3.9 | 0.030 | 1.93 | 0.0 | 0.05 | 28.59 | 0.00 | 2.043 | 8.92 | 0.28 | 7.1 | 92.9 | 0.0 | -1.02 | 0.73 | 0.64 | 2.45 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 5447 | 427 | 5 | 90 | 1 | 0 | 0 | logfile |
✘ | 7PM8 | 13524 | 2024-03-15 | 2021-09-02 | 3.5 | 3.91 | 3.50 | 3.4 | 0.004 | 0.88 | 1.0 | 0.05 | 15.70 | 0.01 | 1.316 | 6.40 | 0.09 | 0.3 | 99.7 | 0.0 | -1.60 | 0.90 | 0.83 | 2.90 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 10149 | 1260 | 6 | 0 | 5 | 0 | 0 | logfile |
✘ | 8SA4 | 40264 | 2024-03-10 | 2023-03-31 | 3.1 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 5193 | 0 | 3 | 236 | 1 | 0 | 0 | logfile |
✘ | 8HWG | 35057 | 2024-03-17 | 2022-12-29 | 3.0 | 3.09 | 2.85 | 3.0 | 0.004 | 0.66 | 0.0 | 0.04 | 18.54 | 0.00 | 1.832 | 7.63 | 4.33 | 6.0 | 93.9 | 0.0 | -1.90 | 0.76 | 0.87 | 3.15 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 18110 | 2209 | 13 | 6 | 12 | 0 | 0 | logfile |
✘ | 8G7N | 29817 | 2024-03-13 | 2023-02-16 | 2.7 | 2.83 | 2.69 | 2.8 | 0.003 | 0.57 | 0.0 | 0.05 | 13.36 | 0.00 | 2.109 | 2.56 | 0.20 | 1.0 | 99.0 | 0.0 | 1.66 | 0.77 | 0.85 | 3.47 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 66108 | 8778 | 42 | 0 | 42 | 0 | 0 | logfile |
✘ | 8SS7 | 40746 | 2024-03-18 | 2023-05-08 | 2.76 | 2.92 | 2.87 | 3.0 | 0.022 | 1.64 | 0.0 | 0.36 | 22.55 | 0.01 | 2.252 | 6.95 | 1.45 | 5.7 | 93.8 | 0.5 | -5.34 | 0.68 | 0.77 | 4.16 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 19437 | 2266 | 12 | 0 | 46 | 0 | 0 | logfile |
✘ | 8QYS | 18761 | 2024-03-11 | 2023-10-26 | 3.89 | 4.28 | 3.89 | 4.1 | 0.003 | 0.57 | 2.0 | 0.04 | 14.29 | 0.00 | 2.222 | 9.04 | 0.00 | 10.1 | 89.9 | 0.0 | -1.10 | 0.85 | 0.85 | 1.27 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 57862 | 7588 | 34 | 0 | 0 | 0 | 0 | logfile |
✘ | 8iMX | 35575 | 2024-03-18 | 2023-03-07 | 2.85 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 19779 | 2402 | 15 | 0 | 31 | 0 | 0 | logfile |