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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✘ | 7LX0 | 23563 | 2023-02-28 | 2021-03-02 | 2.96 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 72462 | 6699 | 60 | 0 | 447 | 0 | 0 | logfile |
✘ | 6oo3 | 20143 | 2023-02-22 | 2019-04-22 | 2.9 | 3.02 | 2.79 | 3.0 | 0.014 | 1.22 | 0.0 | 0.06 | 9.99 | 0.01 | 2.495 | 2.15 | 0.00 | 3.1 | 96.9 | 0.0 | -2.84 | 0.68 | 0.85 | 4.06 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 18236 | 2404 | 8 | 0 | 4 | 0 | 0 | logfile |
✘ | 7R8B | 24314 | 2023-02-19 | 2021-06-26 | 3.1 | 3.48 | — | 3.3 | 0.002 | 0.55 | 0.0 | 0.04 | 13.48 | 0.00 | 2.103 | 6.66 | 1.94 | 3.5 | 96.5 | 0.0 | -1.73 | 0.67 | 0.85 | 2.57 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 10868 | 1371 | 6 | 0 | 2 | 0 | 0 | logfile |
✘ | 7VDD | 31914 | 2023-02-20 | 2021-09-06 | 3.74 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 11940 | 1044 | 10 | 0 | 0 | 0 | 3736 | logfile |
✘ | 7Fii | 31598 | 2023-02-19 | 2021-07-31 | 4.3 | 4.37 | — | 4.1 | 0.002 | 0.36 | 0.0 | 0.04 | 8.97 | 0.00 | 2.073 | 1.59 | 0.00 | 0.9 | 99.1 | 0.0 | 3.08 | 0.64 | 0.69 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 8765 | 1522 | 6 | 0 | 0 | 0 | 0 | logfile |
✘ | 6oPC | 20149 | 2023-02-27 | 2019-04-24 | 3.7 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 30015 | 4455 | 13 | 0 | 48 | 0 | 0 | logfile |
✘ | 7NNL | 12478 | 2023-02-20 | 2021-02-25 | 3.1 | 3.27 | 3.06 | 3.2 | 0.006 | 0.91 | 0.0 | 0.05 | 15.46 | 0.01 | 2.230 | 6.05 | 0.00 | 3.7 | 96.3 | 0.0 | -1.05 | 0.70 | 0.85 | 2.50 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 11099 | 1456 | 6 | 0 | 13 | 0 | 0 | logfile |
✘ | 5X1G | 6701 | 2023-02-16 | 2017-01-25 | 4.5 | 7.89 | — | 37.0 | 0.008 | 1.42 | 0.0 | 0.05 | 10.05 | 0.01 | 2.345 | 27.78 | 0.00 | 6.9 | 93.1 | 0.0 | -2.75 | 0.00 | 0.01 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 155 | 31 | 1 | 0 | 0 | 0 | 0 | logfile |
✘ | 6LHS | 0896 | 2023-02-24 | 2019-12-10 | 3.35 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 22737 | 1456 | 2 | 0 | 0 | 0 | 11313 | logfile |
✘ | 7XR6 | 33408 | 2023-02-19 | 2022-05-09 | 3.4 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 10199 | 1272 | 6 | 0 | 39 | 0 | 0 | logfile |
✘ | 6PCV | 20308 | 2023-02-18 | 2019-06-18 | 3.2 | 2.93 | 3.33 | 3.3 | 0.006 | 0.98 | 0.0 | 0.06 | 14.31 | 0.01 | 2.235 | 6.84 | 0.71 | 4.0 | 96.0 | 0.0 | -3.37 | 0.71 | 0.72 | 2.68 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 9035 | 1155 | 3 | 0 | 0 | 0 | 0 | logfile |
✘ | 7MD3 | 23764 | 2023-02-26 | 2021-04-03 | 3.3 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 45992 | 3133 | 13 | 0 | 8 | 0 | 22961 | logfile |
✘ | 7EJA | 31157 | 2023-02-18 | 2021-04-01 | 3.6 | 4.27 | — | 4.1 | 0.005 | 0.84 | 2.0 | 0.06 | 13.05 | 0.00 | 1.533 | 17.71 | 0.11 | 6.0 | 94.0 | 0.0 | -0.43 | 0.70 | 0.80 | 1.56 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 8584 | 1097 | 6 | 0 | 1 | 0 | 0 | logfile |
✘ | 6oo4 | 20145 | 2023-02-22 | 2019-04-22 | 3.3 | 3.45 | 3.23 | 3.5 | 0.013 | 1.10 | 0.0 | 0.06 | 9.30 | 0.01 | 1.858 | 2.96 | 0.00 | 3.4 | 96.6 | 0.0 | -2.86 | 0.47 | 0.64 | 4.17 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 18452 | 2440 | 8 | 0 | 4 | 0 | 0 | logfile |
✘ | 7W77 | 32341 | 2023-02-20 | 2021-12-03 | 3.3 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 12051 | 1424 | 7 | 0 | 30 | 0 | 0 | logfile |
✘ | 6WB0 | 21583 | 2023-02-18 | 2020-03-26 | 4.2 | 4.26 | — | 4.2 | 0.002 | 0.51 | 0.0 | 0.04 | 11.69 | 0.00 | 2.131 | 11.89 | 0.81 | 4.1 | 95.9 | 0.0 | -4.46 | 0.79 | 0.74 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 8518 | 948 | 4 | 77 | 0 | 0 | 0 | logfile |
✘ | 7PSL | 13613 | 2023-02-19 | 2021-09-23 | 3.3 | 3.77 | — | 3.7 | 0.006 | 0.65 | 0.0 | 0.04 | 14.91 | 0.00 | 2.258 | 5.27 | 0.00 | 3.9 | 96.1 | 0.0 | -3.04 | 0.61 | 0.76 | 2.57 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 9612 | 1200 | 4 | 0 | 4 | 0 | 0 | logfile |
✘ | 7NG8 | 12309 | 2023-02-23 | 2021-02-08 | 3.2 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 20173 | 1341 | 4 | 0 | 0 | 0 | 9979 | logfile |
✘ | 6VM3 | 21237 | 2023-02-21 | 2020-01-27 | 3.07 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 15180 | 1810 | 15 | 0 | 15 | 0 | 0 | logfile |
✘ | 6PYH | 20524 | 2023-02-20 | 2019-07-29 | 4.3 | 4.52 | — | 4.3 | 0.016 | 1.05 | 0.0 | 0.05 | 14.64 | 0.01 | 2.079 | 28.75 | 0.55 | 18.2 | 81.6 | 0.2 | -5.21 | 0.84 | 0.83 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 13187 | 1648 | 3 | 0 | 0 | 0 | 0 | logfile |