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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 7EoT | 31230 | 2022-12-15 | 2021-04-22 | 3.8 | 4.25 | — | 4.1 | 0.002 | 0.51 | 2.0 | 0.04 | 9.22 | 0.00 | 2.074 | 10.72 | 2.22 | 4.2 | 95.8 | 0.0 | 0.02 | 0.82 | 0.71 | 0.77 | 4.1 | 0.004 | 0.70 | 0.0 | 0.04 | 13.83 | 0.00 | 2.109 | 15.35 | 0.49 | 6.1 | 93.9 | 0.0 | -0.82 | 2.56 | 0.86 | 0.79 | 1.33 | 24598 | 3088 | 8 | 0 | 18 | 0 | 0 | logfile |
✔ | 7o75 | 12745 | 2022-12-14 | 2021-04-13 | 3.2 | 3.22 | 3.23 | 3.2 | 0.002 | 0.45 | 0.0 | 0.04 | 14.79 | 0.00 | 1.921 | 4.14 | 0.00 | 2.4 | 97.6 | 0.0 | 1.58 | 0.70 | 0.77 | 2.41 | 3.1 | 0.005 | 0.62 | 0.0 | 0.04 | 17.26 | 0.00 | 1.889 | 9.19 | 0.34 | 3.4 | 96.6 | 0.0 | 0.39 | 1.21 | 0.74 | 0.80 | 2.28 | 73885 | 8901 | 43 | 127 | 22 | 0 | 0 | logfile |
✔ | 7KMZ | 22932 | 2022-12-19 | 2020-11-03 | 3.62 | 4.29 | 3.73 | 3.7 | 0.002 | 0.44 | 0.0 | 0.04 | 13.94 | 0.00 | 2.006 | 3.87 | 0.00 | 3.4 | 96.6 | 0.0 | -0.09 | 0.84 | 0.79 | 1.68 | 3.8 | 0.003 | 0.57 | 0.0 | 0.04 | 15.44 | 0.00 | 2.166 | 10.63 | 0.24 | 4.3 | 95.7 | 0.0 | -0.67 | 0.50 | 0.86 | 0.83 | 1.37 | 34453 | 4260 | 14 | 0 | 61 | 0 | 0 | logfile |
✔ | 7o4L | 12722 | 2022-12-19 | 2021-04-06 | 3.4 | 3.17 | 3.35 | 3.1 | 0.002 | 0.45 | 0.0 | 0.04 | 14.06 | 0.00 | 2.001 | 4.39 | 0.00 | 2.3 | 97.7 | 0.0 | 2.39 | 0.69 | 0.73 | 2.31 | 3.1 | 0.003 | 0.57 | 0.0 | 0.04 | 16.55 | 0.00 | 1.901 | 8.48 | 0.15 | 2.6 | 97.4 | 0.0 | 1.05 | 1.23 | 0.71 | 0.79 | 2.02 | 35159 | 4330 | 25 | 20 | 15 | 0 | 0 | logfile |
✔ | 7o72 | 12743 | 2022-12-14 | 2021-04-12 | 3.4 | 3.66 | 3.39 | 3.4 | 0.002 | 0.47 | 1.0 | 0.04 | 14.35 | 0.00 | 1.971 | 4.18 | 0.03 | 2.2 | 97.8 | 0.0 | 1.40 | 0.86 | 0.83 | 1.86 | 3.4 | 0.003 | 0.67 | 0.0 | 0.04 | 16.89 | 0.00 | 2.002 | 11.24 | 0.23 | 3.2 | 96.8 | 0.0 | 0.68 | 0.85 | 0.87 | 0.86 | 1.55 | 73664 | 8867 | 43 | 130 | 22 | 0 | 0 | logfile |
✔ | 7KMS | 22927 | 2022-12-20 | 2020-11-03 | 3.64 | 4.47 | 3.77 | 3.7 | 0.002 | 0.46 | 0.0 | 0.04 | 13.82 | 0.00 | 2.079 | 3.40 | 0.00 | 4.3 | 95.7 | 0.0 | 0.04 | 0.86 | 0.79 | 1.47 | 3.7 | 0.003 | 0.57 | 0.0 | 0.04 | 15.01 | 0.00 | 2.138 | 11.42 | 0.05 | 4.4 | 95.6 | 0.0 | -0.45 | 0.43 | 0.88 | 0.83 | 1.36 | 39677 | 4887 | 20 | 0 | 71 | 0 | 0 | logfile |
✔ | 7KAL | 22774 | 2022-12-12 | 2020-10-01 | 4.0 | 4.57 | 4.10 | 4.2 | 0.002 | 0.51 | 0.0 | 0.04 | 11.87 | 0.00 | 2.262 | 5.92 | 0.00 | 2.6 | 97.3 | 0.1 | -0.72 | 0.63 | 0.82 | — | 4.2 | 0.003 | 0.68 | 0.0 | 0.04 | 14.44 | 0.00 | 2.240 | 9.07 | 0.28 | 3.1 | 96.8 | 0.1 | 1.85 | 0.59 | 0.63 | 0.83 | — | 10789 | 1429 | 7 | 0 | 0 | 0 | 0 | logfile |
✔ | 7LBE | 23252 | 2022-12-13 | 2021-01-07 | 2.9 | 3.31 | — | 3.2 | 0.002 | 0.44 | 0.0 | 0.04 | 12.74 | 0.00 | 2.200 | 3.62 | 0.00 | 2.8 | 97.2 | 0.0 | 1.20 | 0.69 | 0.82 | 3.12 | 3.2 | 0.004 | 0.60 | 0.0 | 0.04 | 15.74 | 0.00 | 2.115 | 7.32 | 1.57 | 3.4 | 96.6 | 0.0 | 0.72 | 0.44 | 0.70 | 0.85 | 2.90 | 13511 | 1653 | 13 | 0 | 27 | 0 | 0 | logfile |
✔ | 7K8X | 22734 | 2022-12-16 | 2020-09-27 | 3.9 | 4.42 | — | 4.1 | 0.002 | 0.60 | 0.0 | 0.06 | 13.08 | 0.00 | 1.857 | 13.49 | 2.49 | 3.3 | 96.4 | 0.3 | -2.04 | 0.76 | 0.69 | 1.31 | 4.1 | 0.003 | 0.63 | 0.0 | 0.04 | 14.32 | 0.00 | 2.084 | 12.45 | 0.20 | 3.9 | 96.0 | 0.0 | 0.08 | 1.18 | 0.80 | 0.83 | 1.71 | 27399 | 3478 | 10 | 0 | 28 | 0 | 0 | logfile |
✔ | 7JGF | 22325 | 2022-12-11 | 2020-07-19 | 4.69 | 4.81 | — | 4.8 | 0.002 | 0.62 | 0.0 | 0.04 | 13.16 | 0.01 | 2.109 | 26.85 | 0.41 | 4.6 | 95.4 | 0.0 | -0.87 | 0.39 | 0.43 | — | 4.7 | 0.002 | 0.54 | 0.0 | 0.04 | 13.15 | 0.00 | 2.122 | 55.35 | 0.41 | 7.3 | 92.7 | 0.0 | 0.66 | 0.66 | 0.42 | 0.46 | — | 4477 | 532 | 1 | 0 | 0 | 0 | 30 | logfile |
✔ | 7L2Z | 23146 | 2022-12-12 | 2020-12-17 | 3.4 | 3.78 | — | 3.7 | 0.002 | 0.50 | 1.0 | 0.05 | 12.49 | 0.00 | 1.866 | 2.70 | 0.63 | 3.6 | 96.4 | 0.0 | -2.91 | 0.74 | 0.75 | 1.52 | 3.7 | 0.003 | 0.59 | 0.0 | 0.04 | 13.98 | 0.00 | 1.851 | 6.61 | 0.09 | 6.0 | 94.0 | 0.0 | -1.13 | 0.78 | 0.77 | 0.82 | 2.18 | 59631 | 3866 | 6 | 0 | 0 | 0 | 29676 | logfile |
✔ | 6Z3Y | 11066 | 2022-12-11 | 2020-05-22 | 3.51 | 3.78 | 3.53 | 3.6 | 0.002 | 0.52 | 0.0 | 0.04 | 11.75 | 0.00 | 2.269 | 9.16 | 1.68 | 5.6 | 94.4 | 0.0 | 0.09 | 0.59 | 0.70 | 0.69 | 3.6 | 0.003 | 0.84 | 0.0 | 0.05 | 14.86 | 0.00 | 2.015 | 17.59 | 0.31 | 7.9 | 92.1 | 0.0 | -0.73 | 0.71 | 0.59 | 0.71 | 1.24 | 6131 | 771 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 7KAT | 22783 | 2022-12-12 | 2020-10-01 | 4.4 | 5.04 | 4.41 | 4.5 | 0.002 | 0.51 | 0.0 | 0.04 | 11.32 | 0.00 | 2.185 | 6.94 | 0.00 | 1.9 | 98.1 | 0.0 | -0.63 | 0.65 | 0.83 | — | 4.5 | 0.002 | 0.57 | 0.0 | 0.04 | 12.07 | 0.00 | 2.070 | 9.45 | 0.00 | 2.1 | 97.9 | 0.0 | 2.26 | 1.32 | 0.65 | 0.85 | — | 10431 | 1340 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 7EPA | 31235 | 2022-12-13 | 2021-04-26 | 3.6 | 4.08 | — | 3.9 | 0.002 | 0.48 | 0.0 | 0.04 | 11.03 | 0.00 | 2.274 | 5.74 | 0.00 | 3.3 | 96.7 | 0.0 | -1.51 | 0.60 | 0.70 | 1.28 | 3.8 | 0.003 | 0.73 | 0.0 | 0.04 | 13.99 | 0.00 | 2.134 | 12.39 | 0.23 | 4.4 | 95.6 | 0.0 | 0.47 | 1.57 | 0.63 | 0.77 | 1.76 | 10635 | 1564 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 7o4K | 12721 | 2022-12-19 | 2021-04-06 | 3.6 | 3.32 | 3.45 | 3.2 | 0.002 | 0.46 | 0.0 | 0.04 | 14.01 | 0.00 | 2.001 | 3.70 | 0.00 | 2.0 | 98.0 | 0.0 | 1.05 | 0.64 | 0.72 | 2.30 | 3.2 | 0.006 | 0.67 | 0.0 | 0.04 | 16.58 | 0.00 | 1.869 | 9.87 | 0.42 | 3.9 | 96.1 | 0.0 | 0.36 | 0.68 | 0.69 | 0.77 | 2.06 | 34264 | 4216 | 25 | 20 | 14 | 0 | 0 | logfile |
✔ | 6W77 | 21569 | 2022-12-22 | 2020-03-18 | 3.6 | 3.44 | — | 3.3 | 0.002 | 0.53 | 0.0 | 0.03 | 14.96 | 0.00 | 2.084 | 9.36 | 0.12 | 6.1 | 93.7 | 0.2 | -3.22 | 0.73 | 0.67 | 0.91 | 3.3 | 0.006 | 0.86 | 0.0 | 0.04 | 16.81 | 0.01 | 1.852 | 18.02 | 0.87 | 12.2 | 87.6 | 0.2 | -2.34 | 2.05 | 0.76 | 0.71 | 1.02 | 47940 | 1949 | 18 | 1519 | 0 | 0 | 0 | logfile |
✔ | 7EPD | 31238 | 2022-12-13 | 2021-04-26 | 3.9 | 2.74 | — | 3.5 | 0.002 | 0.45 | 0.0 | 0.04 | 12.27 | 0.00 | 2.232 | 7.06 | 0.00 | 4.0 | 96.0 | 0.0 | -2.46 | 0.69 | 0.63 | 0.57 | 3.5 | 0.003 | 0.64 | 0.0 | 0.04 | 14.32 | 0.00 | 2.182 | 13.61 | 0.57 | 6.0 | 94.0 | 0.0 | -0.11 | 0.62 | 0.75 | 0.74 | 1.36 | 10710 | 1569 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 7EoR | 31228 | 2022-12-15 | 2021-04-22 | 4.0 | 4.40 | — | 4.1 | 0.002 | 0.42 | 0.0 | 0.04 | 9.09 | 0.00 | 2.227 | 7.42 | 1.64 | 3.2 | 96.8 | 0.0 | 0.66 | 0.86 | 0.76 | — | 4.1 | 0.003 | 0.69 | 0.0 | 0.04 | 13.24 | 0.00 | 2.170 | 14.02 | 0.23 | 5.6 | 94.4 | 0.0 | -0.44 | 2.21 | 0.88 | 0.82 | — | 24204 | 3030 | 8 | 0 | 16 | 0 | 0 | logfile |
✔ | 7o5H | 12736 | 2022-12-19 | 2021-04-08 | 3.1 | 2.93 | 3.04 | 2.8 | 0.002 | 0.33 | 0.0 | 0.03 | 12.30 | 0.00 | 1.262 | 5.95 | 0.98 | 2.1 | 97.9 | 0.0 | 1.09 | 0.86 | 0.83 | 1.84 | 2.8 | 0.006 | 0.67 | 0.0 | 0.04 | 14.61 | 0.01 | 1.074 | 13.60 | 0.42 | 3.8 | 96.2 | 0.0 | 0.27 | 1.48 | 0.87 | 0.85 | 1.30 | 34436 | 1730 | 22 | 964 | 167 | 0 | 0 | logfile |
✔ | 6WFQ | 21652 | 2022-12-11 | 2020-04-03 | 3.9 | 4.88 | 3.77 | 3.9 | 0.002 | 0.49 | 0.0 | 0.03 | 16.66 | 0.00 | 2.265 | 8.11 | 0.80 | 4.3 | 95.7 | 0.0 | -2.49 | 0.84 | 0.78 | 0.76 | 3.8 | 0.004 | 0.87 | 0.0 | 0.04 | 19.04 | 0.00 | 2.205 | 19.35 | 0.80 | 6.5 | 93.5 | 0.0 | -0.24 | 0.73 | 0.85 | 0.80 | 0.76 | 4164 | 447 | 4 | 30 | 0 | 0 | 0 | logfile |