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Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 3JBR | 6475 | 2022-12-13 | 2015-09-29 | 4.2 | 4.39 | — | 4.2 | 0.008 | 1.30 | 0.0 | 0.06 | 8.64 | 0.00 | 1.419 | 19.29 | 0.37 | 8.1 | 84.8 | 7.0 | -3.43 | 0.66 | 0.70 | — | 4.2 | 0.005 | 0.80 | 0.0 | 0.04 | 11.10 | 0.00 | 2.075 | 17.72 | 0.00 | 12.5 | 85.4 | 2.1 | -0.94 | 1.53 | 0.66 | 0.71 | — | 16467 | 2148 | 6 | 0 | 385 | 0 | 0 | logfile |
✔ | 5FJ8 | 3178 | 2022-12-20 | 2015-10-06 | 3.9 | 3.97 | — | 4.0 | 0.004 | 1.21 | 0.0 | 0.04 | 13.54 | 0.00 | 2.035 | 13.99 | 4.05 | 16.0 | 82.9 | 1.1 | -4.73 | 0.70 | 0.69 | 0.95 | 3.9 | 0.003 | 0.90 | 0.0 | 0.05 | 16.98 | 0.01 | 2.044 | 15.05 | 0.66 | 12.5 | 86.1 | 1.3 | -2.70 | 1.00 | 0.76 | 0.77 | 0.90 | 39284 | 4804 | 25 | 47 | 41 | 0 | 0 | logfile |
✔ | 5FJ9 | 3179 | 2022-12-20 | 2015-10-06 | 4.6 | 4.67 | — | 4.6 | 0.004 | 1.21 | 0.0 | 0.05 | 12.45 | 0.00 | 1.842 | 13.11 | 4.04 | 16.0 | 82.8 | 1.1 | -4.61 | 0.80 | 0.72 | — | 4.5 | 0.005 | 0.95 | 0.0 | 0.05 | 13.56 | 0.01 | 1.815 | 21.60 | 0.02 | 13.5 | 85.4 | 1.2 | -2.43 | 2.55 | 0.84 | 0.78 | — | 38680 | 4845 | 22 | 0 | 41 | 0 | 0 | logfile |
✔ | 3JBS | 6478 | 2022-12-11 | 2015-10-13 | 2.9 | 3.04 | — | 3.2 | 0.010 | 1.32 | 0.0 | 0.06 | 8.67 | 0.01 | 2.510 | 0.00 | 0.00 | 2.9 | 97.1 | 0.0 | 0.51 | 0.21 | 0.76 | 4.15 | 3.1 | 0.003 | 0.63 | 0.0 | 0.04 | 17.65 | 0.00 | 2.262 | 7.24 | 1.97 | 1.7 | 98.3 | 0.0 | 1.01 | 1.32 | 0.21 | 0.80 | 3.18 | 1401 | 175 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 3JBT | 6480 | 2022-12-14 | 2015-10-15 | 3.8 | 3.89 | — | 3.8 | 0.008 | 1.31 | 7.0 | 0.07 | 19.56 | 0.01 | 1.919 | 70.93 | 18.24 | 8.0 | 88.3 | 3.6 | -0.65 | 0.57 | 0.50 | 0.49 | 3.8 | 0.004 | 0.81 | 0.0 | 0.04 | 17.04 | 0.00 | 1.791 | 18.14 | 0.68 | 8.1 | 91.2 | 0.8 | -1.53 | 1.76 | 0.69 | 0.66 | 0.55 | 70252 | 8736 | 28 | 0 | 21 | 0 | 0 | logfile |
✔ | 3JBW | 6489 | 2022-12-20 | 2015-10-21 | 4.6 | 4.71 | — | 4.6 | 0.013 | 1.70 | 1.0 | 0.08 | 21.70 | 0.01 | 1.977 | 22.75 | 4.88 | 5.6 | 93.6 | 0.9 | -3.37 | 0.75 | 0.79 | — | 4.6 | 0.004 | 0.81 | 0.0 | 0.04 | 21.49 | 0.01 | 2.066 | 24.09 | 0.00 | 5.6 | 94.2 | 0.2 | -0.80 | 1.70 | 0.76 | 0.79 | — | 19997 | 1946 | 12 | 222 | 2 | 0 | 0 | logfile |
✔ | 3JBX | 6487 | 2022-12-18 | 2015-10-22 | 3.4 | 3.51 | — | 3.6 | 0.006 | 1.24 | 1.0 | 0.05 | 21.13 | 0.01 | 1.816 | 16.87 | 11.74 | 6.1 | 93.8 | 0.1 | -3.11 | 0.75 | 0.80 | 2.08 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 16670 | 1802 | 14 | 116 | 6 | 0 | 0 | logfile |
✔ | 3JBY | 6488 | 2022-12-18 | 2015-10-22 | 3.7 | 3.78 | — | 3.8 | 0.015 | 1.57 | 0.0 | 0.07 | 20.72 | 0.01 | 2.015 | 24.87 | 5.74 | 4.2 | 95.5 | 0.3 | -3.60 | 0.77 | 0.83 | 2.24 | 3.7 | 0.004 | 0.76 | 0.0 | 0.04 | 21.29 | 0.00 | 2.177 | 15.77 | 0.63 | 4.3 | 95.4 | 0.3 | -0.14 | 0.86 | 0.75 | 0.83 | 1.47 | 16846 | 1802 | 12 | 124 | 6 | 0 | 0 | logfile |
✔ | 5FLM | 3218 | 2022-12-18 | 2015-10-26 | 3.4 | 3.52 | — | 3.5 | 0.004 | 0.74 | 0.0 | 0.05 | 11.28 | 0.00 | 2.034 | 14.89 | 0.00 | 5.1 | 94.9 | 0.0 | -2.61 | 0.51 | 0.66 | 2.61 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 32712 | 3896 | 21 | 80 | 9 | 0 | 0 | logfile |
✔ | 5FLX | 3221 | 2022-12-15 | 2015-10-28 | 3.9 | 4.33 | — | 4.3 | 0.003 | 0.71 | 3.0 | 0.05 | 13.54 | 0.00 | 0.894 | 15.97 | 0.19 | 6.8 | 92.6 | 0.6 | -2.97 | 0.42 | 0.58 | 0.37 | 4.2 | 0.004 | 0.76 | 0.0 | 0.04 | 16.76 | 0.01 | 1.820 | 23.05 | 1.30 | 9.0 | 90.5 | 0.5 | -1.47 | 1.52 | 0.47 | 0.80 | 0.65 | 80592 | 4810 | 40 | 1972 | 76 | 0 | 0 | logfile |
✔ | 5FLU | 3222 | 2022-12-13 | 2015-10-28 | 3.8 | 3.50 | — | 3.4 | 0.009 | 0.93 | 0.0 | 0.05 | 12.31 | 0.01 | 2.213 | 3.37 | 0.00 | 8.7 | 90.1 | 1.2 | -2.36 | 0.72 | 0.64 | 1.09 | 3.3 | 0.004 | 0.73 | 0.0 | 0.04 | 15.66 | 0.00 | 2.121 | 13.95 | 0.56 | 4.6 | 95.4 | 0.0 | -0.30 | 1.38 | 0.77 | 0.79 | 1.89 | 15132 | 2119 | 13 | 0 | 0 | 0 | 0 | logfile |
✔ | 5FMG | 3231 | 2022-12-20 | 2015-11-04 | 3.6 | 3.39 | — | 3.4 | 0.012 | 1.50 | 0.0 | 0.06 | 9.27 | 0.01 | 2.110 | 20.87 | 0.29 | 5.1 | 93.8 | 1.1 | -2.35 | 0.66 | 0.69 | 2.91 | 3.4 | 0.004 | 0.74 | 0.0 | 0.04 | 14.96 | 0.00 | 2.106 | 16.99 | 1.32 | 3.9 | 96.1 | 0.0 | -0.42 | 1.65 | 0.69 | 0.72 | 1.68 | 39334 | 5716 | 30 | 0 | 2 | 0 | 0 | logfile |
✔ | 3JC1 | 6461 | 2022-12-16 | 2015-11-09 | 4.0 | 4.30 | — | 4.3 | 0.009 | 1.19 | 0.0 | 0.05 | 10.37 | 0.00 | 2.291 | 8.81 | 0.00 | 3.8 | 96.2 | 0.0 | -3.91 | 0.31 | 0.59 | — | 4.3 | 0.005 | 0.74 | 0.0 | 0.04 | 16.24 | 0.00 | 2.100 | 11.08 | 0.75 | 1.9 | 98.1 | 0.0 | 3.18 | 1.24 | 0.45 | 0.76 | — | 92106 | 11628 | 68 | 0 | 0 | 0 | 0 | logfile |
✔ | 5FN2 | 3237 | 2022-12-12 | 2015-11-10 | 4.2 | 4.23 | — | 4.2 | 0.009 | 1.73 | 23.0 | 0.10 | 17.98 | 0.01 | 1.890 | 19.13 | 11.69 | 11.9 | 84.1 | 3.9 | -1.77 | 0.48 | 0.55 | — | 4.2 | 0.004 | 0.93 | 0.0 | 0.05 | 14.22 | 0.01 | 2.142 | 21.03 | 0.00 | 8.3 | 90.8 | 0.8 | -1.03 | 1.13 | 0.58 | 0.73 | — | 10276 | 1309 | 4 | 0 | 0 | 0 | 0 | logfile |
✔ | 5FN5 | 3240 | 2022-12-12 | 2015-11-10 | 4.3 | 4.62 | — | 4.3 | 0.012 | 1.85 | 28.0 | 0.11 | 18.82 | 0.01 | 2.074 | 13.65 | 14.00 | 11.4 | 84.3 | 4.3 | -1.91 | 0.65 | 0.62 | — | 4.3 | 0.004 | 0.87 | 0.0 | 0.04 | 13.50 | 0.01 | 2.141 | 23.19 | 0.00 | 9.1 | 90.2 | 0.7 | -1.03 | 1.04 | 0.70 | 0.79 | — | 9645 | 1227 | 4 | 0 | 0 | 0 | 0 | logfile |
✔ | 5FN3 | 3238 | 2022-12-12 | 2015-11-10 | 4.1 | 4.53 | — | 4.1 | 0.011 | 1.81 | 26.0 | 0.10 | 18.64 | 0.01 | 1.021 | 20.47 | 11.34 | 10.7 | 85.3 | 4.0 | -1.54 | 0.66 | 0.60 | — | 4.1 | 0.004 | 0.87 | 0.0 | 0.04 | 13.79 | 0.01 | 2.077 | 21.53 | 0.00 | 9.2 | 89.9 | 0.9 | -0.81 | 2.24 | 0.71 | 0.79 | — | 10291 | 1318 | 5 | 0 | 0 | 0 | 0 | logfile |
✘ | 5FN1 | 3236 | 2022-12-19 | 2015-11-10 | 3.9 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 64714 | 4123 | 38 | 95 | 0 | 0 | 31749 | logfile |
✔ | 5FN4 | 3239 | 2022-12-12 | 2015-11-10 | 4.0 | 4.24 | — | 4.2 | 0.010 | 1.71 | 17.0 | 0.10 | 18.07 | 0.01 | 2.131 | 10.22 | 10.51 | 12.0 | 84.8 | 3.2 | -1.44 | 0.61 | 0.55 | — | 4.1 | 0.004 | 0.91 | 0.0 | 0.05 | 17.48 | 0.01 | 2.145 | 21.05 | 0.67 | 7.0 | 92.3 | 0.7 | -0.49 | 2.21 | 0.69 | 0.79 | — | 9776 | 1250 | 5 | 0 | 0 | 0 | 0 | logfile |
✔ | 5FNA | 3241 | 2022-12-11 | 2015-11-11 | 4.8 | 4.43 | — | 4.2 | 0.013 | 1.51 | 0.0 | 0.08 | 12.32 | 0.01 | 2.219 | 36.54 | 0.00 | 6.0 | 94.0 | 0.0 | -1.83 | 0.48 | 0.71 | — | 4.2 | 0.003 | 0.81 | 0.0 | 0.04 | 14.59 | 0.00 | 2.307 | 16.48 | 0.00 | 10.8 | 89.2 | 0.0 | 1.03 | 2.46 | 0.49 | 0.78 | — | 5328 | 680 | 8 | 0 | 0 | 0 | 0 | logfile |
✔ | 3JC2 | 3245 | 2022-12-11 | 2015-11-15 | 3.6 | 3.58 | 3.97 | 3.7 | 0.012 | 1.63 | 2.0 | 0.08 | 14.90 | 0.01 | 1.175 | 18.51 | 7.32 | 11.5 | 84.5 | 4.0 | -4.52 | 0.22 | 0.59 | 1.48 | 3.6 | 0.003 | 0.81 | 0.0 | 0.04 | 17.10 | 0.00 | 2.171 | 13.19 | 0.24 | 6.6 | 92.8 | 0.6 | -1.30 | 3.32 | 0.23 | 0.52 | 1.58 | 3911 | 482 | 4 | 0 | 32 | 0 | 0 | logfile |