The table shows a selection of parameters. Activate more columns using
the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 7Q5R | 13845 | 2023-11-21 | 2021-11-04 | 3.84 | 4.21 | 3.98 | 4.1 | 0.006 | 0.93 | 0.0 | 0.07 | 10.54 | 0.00 | 2.365 | 4.40 | 0.57 | 1.9 | 98.1 | 0.0 | 0.17 | 0.71 | 0.58 | 0.16 | 4.1 | 0.005 | 0.81 | 0.0 | 0.05 | 14.87 | 0.01 | 2.033 | 15.28 | 0.61 | 2.3 | 97.7 | 0.0 | 0.87 | 3.74 | 0.82 | 0.86 | 1.52 | 95520 | 12600 | 60 | 0 | 0 | 0 | 0 | logfile |
✔ | 7YBL | 33725 | 2023-11-19 | 2022-06-29 | 3.6 | 3.80 | 3.54 | 3.7 | 0.006 | 0.96 | 0.0 | 0.05 | 13.21 | 0.01 | 1.819 | 13.99 | 0.60 | 5.8 | 94.0 | 0.2 | -0.98 | 0.59 | 0.50 | 0.16 | 3.7 | 0.004 | 0.74 | 0.0 | 0.05 | 15.60 | 0.00 | 2.032 | 11.72 | 0.46 | 6.2 | 93.7 | 0.1 | -0.79 | 1.61 | 0.71 | 0.71 | 1.14 | 26819 | 3234 | 39 | 0 | 112 | 0 | 0 | logfile |
✔ | 7W0C | 32238 | 2023-11-16 | 2021-11-18 | 3.93 | 4.02 | — | 3.8 | 0.002 | 0.55 | 0.0 | 0.04 | 13.50 | 0.00 | 2.105 | 14.31 | 0.07 | 4.2 | 95.8 | 0.1 | -0.14 | 0.86 | 0.73 | 0.17 | 3.8 | 0.003 | 0.63 | 0.0 | 0.04 | 15.12 | 0.00 | 2.164 | 16.49 | 0.45 | 4.6 | 95.4 | 0.1 | -0.06 | 0.45 | 0.86 | 0.74 | 0.23 | 13663 | 1492 | 5 | 72 | 2 | 0 | 0 | logfile |
✔ | 7W6P | 32331 | 2023-11-14 | 2021-12-02 | 3.47 | 3.79 | — | 9.6 | 0.004 | 0.70 | 0.0 | 0.04 | 13.78 | 0.00 | 2.196 | 14.60 | 0.11 | 7.0 | 93.0 | 0.0 | -0.94 | 0.22 | 0.11 | 0.18 | 8.7 | 0.003 | 0.68 | 0.0 | 0.04 | 15.37 | 0.00 | 2.199 | 14.66 | 0.44 | 5.7 | 94.3 | 0.0 | -0.83 | 1.94 | 0.31 | 0.25 | 0.54 | 8408 | 1083 | 5 | 0 | 1 | 0 | 0 | logfile |
✔ | 7YLV | 33918 | 2023-11-15 | 2022-07-27 | 3.91 | 4.23 | 4.38 | 4.3 | 0.009 | 0.68 | 0.0 | 0.06 | 10.36 | 0.00 | 2.239 | 1.53 | 0.03 | 2.3 | 97.6 | 0.2 | -0.18 | 0.55 | 0.40 | 0.18 | 4.3 | 0.004 | 1.06 | 0.0 | 0.05 | 15.55 | 0.01 | 2.007 | 25.62 | 0.68 | 3.8 | 96.2 | 0.1 | -0.40 | 2.25 | 0.75 | 0.74 | 0.17 | 65495 | 8564 | 17 | 0 | 0 | 0 | 0 | logfile |
✘ | 8FXH | 29533 | 2023-11-20 | 2023-01-24 | 2.8 | 2.94 | 2.88 | 4.0 | 0.006 | 1.37 | 50.0 | 0.10 | 17.25 | 0.01 | 2.235 | 6.73 | 1.19 | 7.8 | 91.8 | 0.4 | -1.03 | 0.32 | 0.19 | 0.18 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 30228 | 3786 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 7AS9 | 11890 | 2023-11-21 | 2020-10-27 | 3.5 | 4.52 | 3.51 | 4.2 | 0.007 | 0.98 | 0.0 | 0.05 | 17.12 | 0.01 | 1.976 | 8.25 | 0.07 | 13.0 | 86.6 | 0.4 | -4.86 | 0.92 | 0.83 | 0.18 | 4.2 | 0.005 | 0.81 | 0.0 | 0.04 | 18.26 | 0.01 | 2.035 | 33.29 | 0.90 | 11.8 | 88.2 | 0.1 | -3.02 | 0.73 | 0.92 | 0.84 | 0.20 | 93137 | 3720 | 32 | 2999 | 0 | 0 | 0 | logfile |
✔ | 8SPo | 40680 | 2023-11-20 | 2023-05-03 | 2.98 | 2.34 | 3.17 | 2.1 | 0.004 | 0.60 | 0.0 | 0.26 | 16.49 | 0.00 | 0.334 | 11.05 | 0.00 | 6.0 | 94.0 | 0.0 | -1.15 | 0.46 | 0.30 | 0.19 | 1.6 | 0.004 | 0.73 | 0.0 | 0.04 | 18.26 | 0.00 | 1.816 | 13.01 | 2.09 | 6.6 | 93.4 | 0.0 | -1.23 | 1.36 | 0.57 | 0.49 | 1.10 | 31307 | 3428 | 22 | 154 | 6 | 0 | 0 | logfile |
✔ | 7DN3 | 30779 | 2023-11-22 | 2020-12-08 | 3.5 | 4.31 | — | 3.8 | 0.012 | 1.43 | 31.0 | 0.09 | 16.92 | 0.01 | 1.961 | 21.63 | 4.73 | 9.9 | 89.4 | 0.7 | -4.77 | 0.75 | 0.61 | 0.19 | 3.9 | 0.004 | 0.86 | 0.0 | 0.05 | 17.43 | 0.00 | 2.041 | 17.35 | 0.40 | 8.6 | 91.3 | 0.2 | -1.64 | 1.60 | 0.84 | 0.79 | 0.87 | 36856 | 4521 | 26 | 45 | 8 | 0 | 0 | logfile |
✔ | 7MF3 | 23810 | 2023-11-18 | 2021-04-08 | 3.4 | 4.14 | — | 3.2 | 0.003 | 0.68 | 0.0 | 0.04 | 15.41 | 0.00 | 1.985 | 17.36 | 0.04 | 6.5 | 93.5 | 0.0 | -0.34 | 0.90 | 0.73 | 0.19 | 3.1 | 0.003 | 0.72 | 0.0 | 0.04 | 17.39 | 0.00 | 1.957 | 17.27 | 0.24 | 7.0 | 93.0 | 0.0 | -0.87 | 1.45 | 0.91 | 0.74 | 0.04 | 22938 | 2822 | 12 | 0 | 8 | 0 | 0 | logfile |
✔ | 7MVU | 24056 | 2023-11-19 | 2021-05-15 | 3.77 | 4.87 | 3.73 | 4.0 | 0.002 | 0.36 | 0.0 | 0.03 | 6.38 | 0.00 | 2.187 | 3.55 | 0.00 | 1.1 | 98.9 | 0.0 | -0.33 | 0.85 | 0.73 | 0.19 | 4.0 | 0.003 | 0.58 | 0.0 | 0.03 | 11.75 | 0.00 | 1.882 | 11.93 | 0.22 | 3.2 | 96.8 | 0.0 | 2.54 | 2.06 | 0.88 | 0.82 | 0.36 | 25645 | 1604 | 2 | 0 | 0 | 0 | 12841 | logfile |
✔ | 7FJo | 31625 | 2023-11-20 | 2021-08-04 | 3.34 | 3.72 | — | 3.5 | 0.012 | 1.56 | 4.0 | 0.09 | 12.69 | 0.02 | 1.277 | 9.35 | 3.26 | 7.2 | 92.4 | 0.4 | -1.06 | 0.55 | 0.36 | 0.19 | 3.5 | 0.008 | 0.85 | 0.0 | 0.05 | 14.79 | 0.00 | 2.080 | 12.88 | 0.42 | 5.7 | 94.2 | 0.0 | -0.56 | 3.15 | 0.77 | 0.79 | 1.92 | 28547 | 3640 | 12 | 0 | 25 | 0 | 0 | logfile |
✔ | 6RED | 4850 | 2023-11-21 | 2019-04-12 | 3.0 | 3.22 | 3.14 | 27.0 | 0.012 | 1.04 | 0.0 | 0.06 | 14.48 | 0.01 | 2.140 | 5.83 | 0.31 | 4.7 | 95.2 | 0.1 | -3.86 | 0.16 | 0.02 | 0.19 | 27.0 | 0.004 | 0.80 | 0.0 | 0.05 | 15.95 | 0.00 | 1.867 | 19.50 | 2.41 | 5.4 | 94.5 | 0.1 | -0.98 | 1.03 | 0.25 | 0.16 | 0.28 | 33899 | 4503 | 25 | 0 | 10 | 0 | 0 | logfile |
✔ | 6PMi | 20394 | 2023-11-14 | 2019-07-02 | 3.86 | 4.66 | — | 4.1 | 0.012 | 1.26 | 0.0 | 0.06 | 15.81 | 0.01 | 1.949 | 12.35 | 0.24 | 10.7 | 88.9 | 0.4 | -4.48 | 0.69 | 0.51 | 0.20 | 4.1 | 0.005 | 0.76 | 0.0 | 0.04 | 17.30 | 0.01 | 1.808 | 26.87 | 0.58 | 10.9 | 88.9 | 0.1 | -2.64 | 1.01 | 0.86 | 0.78 | 0.40 | 57985 | 3453 | 10 | 110 | 4 | 0 | 28610 | logfile |
✔ | 6PMJ | 20395 | 2023-11-14 | 2019-07-02 | 3.91 | 5.34 | — | 4.4 | 0.011 | 1.21 | 0.0 | 0.06 | 15.82 | 0.01 | 2.011 | 11.04 | 0.31 | 10.4 | 89.3 | 0.3 | -4.41 | 0.67 | 0.43 | 0.20 | 4.4 | 0.004 | 0.74 | 0.0 | 0.04 | 17.65 | 0.00 | 1.804 | 27.04 | 0.65 | 11.2 | 88.7 | 0.1 | -2.54 | 1.68 | 0.89 | 0.77 | 0.05 | 57984 | 3453 | 10 | 110 | 4 | 0 | 28609 | logfile |
✔ | 5Y4o | 6805 | 2023-11-15 | 2017-08-04 | 3.8 | 3.55 | — | 3.6 | 0.022 | 2.44 | 28.0 | 0.12 | 19.88 | 0.02 | 0.471 | 78.50 | 20.31 | 7.8 | 87.8 | 4.5 | -2.08 | 0.55 | 0.62 | 0.20 | 3.6 | 0.003 | 0.77 | 0.0 | 0.04 | 17.56 | 0.00 | 2.042 | 14.00 | 0.45 | 7.0 | 92.5 | 0.5 | -0.18 | 1.75 | 0.59 | 0.72 | 1.52 | 12341 | 1561 | 7 | 0 | 0 | 0 | 0 | logfile |
✔ | 8oR0 | 17114 | 2023-11-17 | 2023-04-12 | 3.1 | 2.37 | 2.99 | 1.7 | 0.004 | 0.64 | 1.0 | 0.04 | 15.61 | 0.00 | 1.149 | 6.33 | 0.51 | 3.9 | 96.1 | 0.0 | 0.59 | 0.64 | 0.56 | 0.20 | 1.5 | 0.004 | 0.72 | 0.0 | 0.04 | 16.60 | 0.00 | 2.020 | 13.34 | 0.36 | 4.7 | 95.3 | 0.0 | -0.12 | 1.69 | 0.70 | 0.65 | 0.89 | 18823 | 2489 | 8 | 0 | 3 | 0 | 0 | logfile |
✔ | 7CMi | 30407 | 2023-11-14 | 2020-07-27 | 2.9 | 3.36 | — | 3.3 | 0.006 | 1.01 | 0.0 | 0.05 | 15.07 | 0.01 | 1.904 | 7.49 | 1.44 | 7.2 | 91.4 | 1.4 | -5.99 | 0.62 | 0.67 | 0.20 | 3.3 | 0.004 | 0.81 | 0.0 | 0.05 | 16.52 | 0.00 | 2.092 | 8.50 | 2.49 | 7.4 | 92.5 | 0.1 | -0.12 | 1.14 | 0.69 | 0.86 | 1.77 | 7353 | 928 | 7 | 0 | 10 | 6 | 0 | logfile |
✔ | 6FLQ | 4275 | 2023-11-20 | 2018-01-26 | 3.6 | 3.93 | 3.76 | 40.0 | 0.016 | 1.33 | 0.0 | 0.07 | 14.73 | 0.01 | 1.897 | 5.97 | 1.40 | 10.8 | 89.1 | 0.1 | -4.32 | 0.16 | 0.02 | 0.21 | 3.8 | 0.003 | 0.74 | 0.0 | 0.04 | 16.79 | 0.00 | 1.963 | 13.98 | 0.22 | 8.3 | 91.6 | 0.1 | -1.21 | 1.98 | 0.26 | 0.19 | 0.17 | 30201 | 3868 | 10 | 91 | 3 | 0 | 0 | logfile |
✔ | 6M2W | 30067 | 2023-11-16 | 2020-03-01 | 3.8 | 2.59 | 3.89 | 2.6 | 0.006 | 1.08 | 0.0 | 0.05 | 15.58 | 0.01 | 2.276 | 3.96 | 3.59 | 3.1 | 96.9 | 0.0 | -5.38 | 0.77 | 0.64 | 0.21 | 2.1 | 0.003 | 0.63 | 0.0 | 0.04 | 15.54 | 0.00 | 2.105 | 8.78 | 0.22 | 2.8 | 97.2 | 0.0 | 0.30 | 1.82 | 0.83 | 0.79 | 1.96 | 120452 | 14972 | 16 | 0 | 1828 | 0 | 0 | logfile |