The table shows a selection of parameters. Activate more columns using
the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 6N8N | 0373 | 2023-04-27 | 2018-11-29 | 3.8 | 3.91 | — | 3.8 | 0.006 | 0.89 | 2.0 | 0.05 | 15.10 | 0.01 | 1.297 | 3.58 | 0.49 | 6.7 | 92.8 | 0.5 | -3.90 | 0.79 | 0.87 | 2.98 | 3.8 | 0.005 | 0.68 | 0.0 | 0.04 | 16.03 | 0.00 | 2.086 | 10.29 | 0.83 | 8.4 | 91.5 | 0.1 | -1.16 | 1.26 | 0.79 | 0.87 | 2.10 | 131813 | 7085 | 48 | 3482 | 302 | 0 | 0 | logfile |
✔ | 6N8o | 0374 | 2023-04-28 | 2018-11-29 | 3.5 | 3.74 | — | 3.6 | 0.007 | 0.89 | 2.0 | 0.05 | 14.62 | 0.01 | 1.297 | 2.91 | 0.56 | 7.2 | 92.4 | 0.4 | -4.60 | 0.82 | 0.89 | 3.44 | 3.6 | 0.004 | 0.61 | 0.0 | 0.04 | 15.61 | 0.00 | 2.092 | 7.91 | 0.46 | 7.8 | 92.0 | 0.2 | -1.26 | 1.99 | 0.81 | 0.88 | 2.56 | 133453 | 7292 | 49 | 3480 | 302 | 0 | 0 | logfile |
✔ | 6N9U | 0379 | 2023-04-21 | 2018-12-04 | 3.7 | 3.80 | — | 3.7 | 0.007 | 0.84 | 0.0 | 0.06 | 12.72 | 0.01 | 2.205 | 3.66 | 0.34 | 5.3 | 94.7 | 0.0 | -4.67 | 0.75 | 0.82 | 3.31 | 3.7 | 0.003 | 0.61 | 0.0 | 0.04 | 16.50 | 0.00 | 1.944 | 7.32 | 0.11 | 4.1 | 95.9 | 0.0 | -1.57 | 1.14 | 0.77 | 0.83 | 1.77 | 8822 | 1063 | 7 | 18 | 4 | 0 | 0 | logfile |
✔ | 6N9V | 0380 | 2023-04-25 | 2018-12-04 | 4.0 | 4.06 | — | 4.0 | 0.005 | 0.82 | 0.0 | 0.05 | 13.72 | 0.01 | 2.125 | 2.60 | 0.41 | 3.8 | 96.2 | 0.0 | -4.08 | 0.76 | 0.82 | — | 4.0 | 0.003 | 0.65 | 0.0 | 0.04 | 16.77 | 0.00 | 1.938 | 9.10 | 0.36 | 3.6 | 96.4 | 0.0 | -1.05 | 1.94 | 0.78 | 0.85 | — | 21526 | 2651 | 15 | 33 | 14 | 0 | 0 | logfile |
✔ | 6N9W | 0381 | 2023-04-25 | 2018-12-04 | 4.0 | 4.51 | — | 4.2 | 0.005 | 0.76 | 0.0 | 0.05 | 13.64 | 0.00 | 2.082 | 3.05 | 0.10 | 3.4 | 96.6 | 0.0 | -3.98 | 0.78 | 0.79 | — | 4.2 | 0.003 | 0.73 | 0.0 | 0.04 | 16.29 | 0.00 | 1.886 | 12.74 | 0.30 | 3.3 | 96.7 | 0.0 | -0.73 | 1.29 | 0.80 | 0.81 | — | 19576 | 2410 | 15 | 30 | 12 | 0 | 0 | logfile |
✔ | 6N9X | 0382 | 2023-04-25 | 2018-12-04 | 4.1 | 4.18 | — | 4.1 | 0.006 | 0.84 | 0.0 | 0.05 | 13.69 | 0.02 | 2.131 | 3.65 | 0.60 | 3.9 | 96.1 | 0.0 | -4.04 | 0.74 | 0.78 | — | 4.1 | 0.003 | 0.65 | 0.0 | 0.04 | 14.75 | 0.00 | 1.857 | 8.78 | 0.05 | 4.6 | 95.4 | 0.0 | -0.90 | 1.31 | 0.78 | 0.81 | — | 19658 | 2419 | 14 | 31 | 12 | 0 | 0 | logfile |
✔ | 6NB4 | 0402 | 2023-04-27 | 2018-12-06 | 3.6 | 3.72 | — | 3.7 | 0.016 | 1.34 | 4.0 | 0.09 | 10.81 | 0.01 | 1.986 | 1.24 | 0.45 | 2.6 | 97.1 | 0.2 | 0.04 | 0.77 | 0.74 | 2.29 | 3.6 | 0.004 | 0.71 | 0.0 | 0.04 | 14.60 | 0.00 | 2.139 | 7.09 | 0.34 | 4.3 | 95.7 | 0.0 | -0.10 | 0.80 | 0.81 | 0.80 | 2.05 | 26681 | 3315 | 46 | 0 | 113 | 0 | 0 | logfile |
✔ | 6NB6 | 0403 | 2023-04-27 | 2018-12-06 | 4.2 | 4.51 | — | 4.3 | 0.017 | 1.50 | 4.0 | 0.11 | 9.85 | 0.01 | 2.264 | 1.21 | 0.42 | 3.3 | 96.4 | 0.2 | 0.22 | 0.81 | 0.76 | — | 4.3 | 0.003 | 0.68 | 0.0 | 0.04 | 11.35 | 0.00 | 2.131 | 5.54 | 0.00 | 3.6 | 96.4 | 0.0 | 0.77 | 1.52 | 0.83 | 0.80 | — | 25783 | 3599 | 48 | 0 | 149 | 0 | 0 | logfile |
✔ | 6NB7 | 0404 | 2023-04-27 | 2018-12-06 | 4.5 | 4.89 | — | 4.6 | 0.016 | 1.50 | 1.0 | 0.10 | 9.02 | 0.01 | 2.330 | 0.87 | 0.97 | 3.2 | 96.6 | 0.2 | 0.24 | 0.80 | 0.71 | — | 4.6 | 0.003 | 0.79 | 0.0 | 0.05 | 10.43 | 0.00 | 2.139 | 7.53 | 0.00 | 5.1 | 94.9 | 0.0 | -0.44 | 0.88 | 0.83 | 0.78 | — | 24718 | 3828 | 49 | 0 | 137 | 0 | 0 | logfile |
✔ | 6NBF | 0410 | 2023-04-21 | 2018-12-07 | 3.0 | 3.52 | — | 3.5 | 0.005 | 0.90 | 0.0 | 0.06 | 8.85 | 0.01 | 2.307 | 3.07 | 0.10 | 3.0 | 97.0 | 0.0 | -1.40 | 0.64 | 0.79 | 3.11 | 3.5 | 0.003 | 0.58 | 0.0 | 0.04 | 13.98 | 0.00 | 2.136 | 6.62 | 1.83 | 1.9 | 98.1 | 0.0 | 0.75 | 1.19 | 0.54 | 0.75 | 2.26 | 9424 | 1148 | 7 | 0 | 10 | 0 | 0 | logfile |
✔ | 6NBH | 0411 | 2023-04-21 | 2018-12-07 | 3.5 | 4.06 | — | 4.0 | 0.005 | 0.86 | 0.0 | 0.05 | 8.34 | 0.00 | 2.357 | 1.79 | 0.20 | 2.6 | 97.4 | 0.0 | -1.51 | 0.62 | 0.76 | 1.73 | 4.0 | 0.003 | 0.72 | 0.0 | 0.04 | 15.72 | 0.00 | 2.193 | 11.77 | 0.51 | 2.7 | 97.3 | 0.0 | 0.46 | 2.20 | 0.58 | 0.74 | 1.66 | 9502 | 1159 | 7 | 0 | 10 | 0 | 0 | logfile |
✔ | 6NBi | 0412 | 2023-04-21 | 2018-12-07 | 4.0 | 4.43 | — | 4.3 | 0.005 | 0.88 | 0.0 | 0.05 | 8.85 | 0.00 | 2.337 | 2.35 | 0.31 | 2.8 | 97.2 | 0.0 | -1.70 | 0.62 | 0.74 | — | 4.3 | 0.003 | 0.79 | 0.0 | 0.04 | 16.22 | 0.00 | 2.115 | 18.96 | 0.72 | 2.7 | 97.3 | 0.0 | -0.13 | 2.54 | 0.64 | 0.78 | — | 9195 | 1141 | 7 | 0 | 3 | 0 | 0 | logfile |
✔ | 6ND0 | 0439 | 2023-04-26 | 2018-12-13 | 3.5 | 3.65 | — | 3.6 | 0.008 | 0.94 | 0.0 | 0.06 | 10.80 | 0.01 | 2.178 | 5.06 | 0.43 | 7.8 | 92.0 | 0.2 | -4.62 | 0.60 | 0.75 | 3.00 | 3.6 | 0.003 | 0.67 | 0.0 | 0.04 | 14.64 | 0.00 | 2.110 | 9.60 | 0.27 | 6.0 | 93.9 | 0.1 | -1.29 | 0.83 | 0.67 | 0.80 | 2.26 | 22964 | 2908 | 4 | 0 | 0 | 0 | 0 | logfile |
✘ | 6ND1 | 0440 | 2023-04-21 | 2018-12-13 | 4.1 | 4.15 | — | 4.1 | 0.009 | 1.23 | 14.0 | 0.08 | 16.24 | 0.01 | 2.249 | 7.63 | 0.10 | 3.7 | 96.2 | 0.2 | -3.89 | 0.60 | 0.82 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 9186 | 1179 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 6ND4 | 0441 | 2023-04-22 | 2018-12-13 | 4.3 | 4.41 | — | 4.2 | 0.010 | 1.03 | 0.0 | 0.06 | 14.55 | 0.02 | 2.230 | 5.19 | 0.00 | 6.4 | 93.6 | 0.1 | -3.63 | 0.80 | 0.66 | — | 4.2 | 0.007 | 1.08 | 0.0 | 0.05 | 15.04 | 0.01 | 1.926 | 19.87 | 0.00 | 17.6 | 82.3 | 0.1 | -3.59 | 1.14 | 0.85 | 0.77 | — | 63993 | 9225 | 30 | 551 | 1306 | 0 | 0 | logfile |
✔ | 6NDY | 0443 | 2023-04-22 | 2018-12-14 | 3.6 | 3.70 | — | 3.6 | 0.005 | 0.89 | 0.0 | 0.05 | 14.71 | 0.01 | 2.037 | 4.67 | 0.00 | 5.9 | 94.1 | 0.0 | -3.78 | 0.66 | 0.54 | 0.23 | 3.6 | 0.003 | 0.72 | 0.0 | 0.04 | 16.31 | 0.00 | 0.894 | 11.65 | 0.52 | 5.9 | 94.1 | 0.0 | -0.22 | 1.30 | 0.79 | 0.80 | 0.84 | 12531 | 1596 | 11 | 0 | 20 | 0 | 0 | logfile |
✔ | 6NMA | 0445 | 2023-04-22 | 2019-01-10 | 3.38 | 3.71 | — | 3.7 | 0.009 | 0.78 | 0.0 | 0.05 | 15.30 | 0.00 | 1.973 | 10.70 | 8.09 | 11.0 | 89.0 | 0.1 | -4.94 | 0.65 | 0.78 | 2.70 | 3.7 | 0.003 | 0.60 | 0.0 | 0.04 | 16.44 | 0.00 | 2.189 | 8.70 | 0.46 | 8.0 | 92.0 | 0.0 | -1.40 | 1.18 | 0.66 | 0.79 | 1.78 | 12404 | 1435 | 6 | 25 | 2 | 0 | 0 | logfile |
✔ | 6NMC | 0446 | 2023-04-22 | 2019-01-10 | 4.24 | 4.55 | — | 4.2 | 0.014 | 1.16 | 6.0 | 0.07 | 16.40 | 0.01 | 2.015 | 20.07 | 2.45 | 10.2 | 89.4 | 0.4 | -4.23 | 0.86 | 0.76 | — | 4.2 | 0.005 | 0.77 | 0.0 | 0.04 | 14.53 | 0.00 | 1.850 | 22.51 | 0.07 | 8.7 | 91.3 | 0.0 | -1.07 | 1.84 | 0.89 | 0.85 | — | 12808 | 1480 | 8 | 25 | 2 | 6 | 0 | logfile |
✔ | 6NMD | 0447 | 2023-04-22 | 2019-01-10 | 3.49 | 3.91 | — | 4.0 | 0.013 | 1.11 | 5.0 | 0.07 | 16.81 | 0.01 | 2.014 | 16.61 | 2.43 | 10.7 | 88.9 | 0.4 | -4.62 | 0.55 | 0.46 | 0.29 | 3.9 | 0.003 | 0.76 | 0.0 | 0.04 | 18.13 | 0.00 | 1.939 | 13.02 | 0.41 | 6.3 | 93.7 | 0.0 | -1.44 | 1.84 | 0.73 | 0.78 | 1.29 | 11779 | 1358 | 7 | 25 | 2 | 6 | 0 | logfile |
✔ | 6NMi | 0452 | 2023-04-27 | 2019-01-10 | 3.7 | 3.82 | 3.78 | 3.8 | 0.008 | 1.13 | 0.0 | 0.06 | 9.85 | 0.01 | 2.240 | 6.06 | 0.16 | 10.6 | 89.2 | 0.2 | -4.24 | 0.71 | 0.76 | 1.90 | 3.8 | 0.003 | 0.71 | 0.0 | 0.04 | 15.79 | 0.00 | 2.109 | 13.10 | 0.40 | 6.8 | 93.1 | 0.0 | -0.84 | 0.90 | 0.72 | 0.77 | 1.14 | 24379 | 2908 | 12 | 0 | 277 | 0 | 0 | logfile |