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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 6HUM | 0281 | 2022-12-21 | 2018-10-09 | 3.34 | 3.41 | — | 3.5 | 0.009 | 1.20 | 5.0 | 0.10 | 10.92 | 0.01 | 1.302 | 8.66 | 0.33 | 11.5 | 87.9 | 0.7 | -4.32 | 0.61 | 0.79 | 3.36 | 3.5 | 0.004 | 0.79 | 0.0 | 0.04 | 15.38 | 0.01 | 2.154 | 12.97 | 0.52 | 9.9 | 89.9 | 0.2 | -1.23 | 0.74 | 0.62 | 0.84 | 2.34 | 29521 | 3793 | 21 | 0 | 5 | 0 | 0 | logfile |
✔ | 6HUo | 0282 | 2022-12-13 | 2018-10-09 | 3.26 | 3.38 | 3.25 | 3.3 | 0.005 | 0.86 | 0.0 | 0.06 | 8.67 | 0.01 | 2.257 | 4.89 | 0.00 | 3.8 | 96.2 | 0.0 | -4.15 | 0.74 | 0.83 | 4.30 | 3.3 | 0.005 | 0.63 | 0.0 | 0.04 | 13.82 | 0.00 | 2.142 | 8.39 | 0.43 | 4.3 | 95.7 | 0.0 | 0.20 | 0.72 | 0.76 | 0.87 | 3.73 | 15227 | 1808 | 16 | 0 | 35 | 0 | 0 | logfile |
✔ | 6HUP | 0283 | 2022-12-13 | 2018-10-09 | 3.58 | 3.70 | 3.52 | 3.6 | 0.013 | 1.18 | 0.0 | 0.08 | 8.91 | 0.01 | 2.251 | 5.93 | 0.00 | 4.9 | 95.1 | 0.0 | -3.42 | 0.72 | 0.85 | 3.56 | 3.6 | 0.004 | 0.63 | 0.0 | 0.04 | 14.33 | 0.00 | 2.150 | 11.53 | 0.25 | 3.9 | 96.1 | 0.0 | -0.35 | 1.94 | 0.73 | 0.85 | 2.96 | 15265 | 1808 | 17 | 0 | 37 | 0 | 0 | logfile |
✔ | 6HV8 | 0287 | 2022-12-12 | 2018-10-10 | 4.4 | 4.51 | — | 4.4 | 0.009 | 1.62 | 2.0 | 0.08 | 10.20 | 0.01 | 1.472 | 9.02 | 1.31 | 22.1 | 77.3 | 0.6 | -4.84 | 0.74 | 0.72 | — | 4.4 | 0.003 | 0.86 | 0.0 | 0.05 | 12.68 | 0.00 | 2.153 | 15.07 | 0.00 | 13.6 | 86.4 | 0.0 | -2.57 | 1.05 | 0.74 | 0.71 | — | 9206 | 1184 | 2 | 0 | 2 | 0 | 0 | logfile |
✔ | 6HV9 | 0288 | 2022-12-22 | 2018-10-10 | 4.98 | 4.88 | — | 4.5 | 0.012 | 1.86 | 14.0 | 0.09 | 12.25 | 0.01 | 1.447 | 9.27 | 0.49 | 10.9 | 88.8 | 0.3 | -4.02 | 0.78 | 0.66 | — | 4.5 | 0.008 | 0.85 | 0.0 | 0.04 | 13.45 | 0.00 | 2.033 | 16.06 | 0.02 | 8.6 | 91.4 | 0.1 | -1.61 | 1.66 | 0.79 | 0.68 | — | 47617 | 6040 | 18 | 49 | 4 | 0 | 0 | logfile |
✘ | 6HWH | 0289 | 2022-12-20 | 2018-10-12 | 3.3 | 3.56 | — | 3.5 | 0.012 | 1.33 | 1.0 | 0.07 | 12.95 | 0.01 | 0.691 | 7.86 | 0.51 | 9.4 | 90.5 | 0.1 | -5.53 | 0.71 | 0.82 | 4.01 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 40632 | 4916 | 40 | 0 | 420 | 0 | 0 | logfile |
✔ | 6HXX | 0297 | 2022-12-13 | 2018-10-18 | 3.4 | 3.76 | 3.51 | 3.7 | 0.008 | 1.14 | 0.0 | 0.07 | 12.31 | 0.01 | 1.586 | 8.35 | 0.28 | 8.1 | 91.9 | 0.0 | -3.79 | 0.53 | 0.84 | 2.51 | 3.7 | 0.003 | 0.68 | 0.0 | 0.04 | 16.37 | 0.00 | 2.128 | 13.52 | 0.41 | 7.6 | 92.4 | 0.0 | -0.23 | 1.26 | 0.56 | 0.86 | 2.18 | 65765 | 7840 | 70 | 175 | 0 | 0 | 0 | logfile |
✔ | 6HXZ | 0298 | 2022-12-18 | 2018-10-18 | 4.1 | 4.12 | 3.30 | 4.1 | 0.008 | 1.04 | 0.0 | 0.06 | 11.58 | 0.01 | 2.476 | 0.35 | 1.95 | 13.3 | 86.7 | 0.0 | -5.83 | 0.63 | 0.83 | — | 4.1 | 0.003 | 0.76 | 0.0 | 0.04 | 13.03 | 0.00 | 2.171 | 9.03 | 0.00 | 9.1 | 90.9 | 0.0 | -2.32 | 0.90 | 0.64 | 0.82 | — | 34008 | 4224 | 24 | 0 | 0 | 0 | 0 | logfile |
✔ | 6HYD | 0308 | 2022-12-12 | 2018-10-19 | 3.9 | 4.01 | — | 4.0 | 0.004 | 0.85 | 0.0 | 0.05 | 9.33 | 0.01 | 2.319 | 2.63 | 0.24 | 5.7 | 94.0 | 0.3 | -6.69 | 0.74 | 0.77 | 2.59 | 3.9 | 0.003 | 0.70 | 0.0 | 0.04 | 14.53 | 0.00 | 2.171 | 5.59 | 0.24 | 5.6 | 94.2 | 0.2 | -1.67 | 1.74 | 0.77 | 0.80 | 1.55 | 12168 | 1543 | 1 | 0 | 31 | 0 | 0 | logfile |
✔ | 6HYP | 0309 | 2022-12-12 | 2018-10-22 | 4.4 | 4.53 | — | 4.4 | 0.003 | 0.72 | 0.0 | 0.05 | 8.72 | 0.00 | 1.943 | 1.67 | 0.34 | 7.3 | 92.2 | 0.4 | -5.99 | 0.75 | 0.69 | — | 4.4 | 0.002 | 0.67 | 0.0 | 0.04 | 8.23 | 0.00 | 2.173 | 3.43 | 0.00 | 7.0 | 92.9 | 0.1 | -1.16 | 0.61 | 0.76 | 0.73 | — | 12392 | 2082 | 1 | 0 | 192 | 0 | 0 | logfile |
✔ | 6HZ4 | 0310 | 2022-12-19 | 2018-10-22 | 3.6 | 3.69 | 3.54 | 3.7 | 0.013 | 1.08 | 0.0 | 0.06 | 14.99 | 0.01 | 1.969 | 3.57 | 1.15 | 2.8 | 97.2 | 0.0 | -0.49 | 0.74 | 0.78 | 2.72 | 3.6 | 0.002 | 0.56 | 0.0 | 0.04 | 16.95 | 0.00 | 1.936 | 8.60 | 0.35 | 3.2 | 96.8 | 0.0 | 0.80 | 1.43 | 0.73 | 0.78 | 2.26 | 36308 | 2212 | 14 | 3 | 6 | 0 | 17933 | logfile |
✔ | 6HZ5 | 0311 | 2022-12-13 | 2018-10-22 | 4.2 | 4.28 | 4.18 | 4.2 | 0.009 | 0.97 | 0.0 | 0.05 | 14.60 | 0.01 | 1.960 | 2.98 | 0.70 | 2.7 | 97.3 | 0.0 | -0.55 | 0.79 | 0.76 | — | 4.2 | 0.002 | 0.55 | 0.0 | 0.04 | 14.58 | 0.00 | 1.906 | 9.90 | 0.08 | 3.5 | 96.5 | 0.0 | 0.53 | 1.87 | 0.80 | 0.77 | — | 67582 | 4120 | 26 | 6 | 12 | 0 | 33368 | logfile |
✔ | 6HZ6 | 0312 | 2022-12-13 | 2018-10-22 | 4.3 | 4.35 | 4.18 | 4.3 | 0.010 | 1.00 | 0.0 | 0.05 | 14.61 | 0.01 | 1.941 | 3.54 | 0.59 | 2.8 | 97.2 | 0.0 | -0.71 | 0.81 | 0.77 | — | 4.3 | 0.003 | 0.60 | 0.0 | 0.04 | 14.73 | 0.00 | 1.800 | 14.25 | 0.00 | 4.8 | 95.2 | 0.0 | -0.24 | 1.90 | 0.82 | 0.78 | — | 67582 | 4120 | 26 | 6 | 12 | 0 | 33368 | logfile |
✔ | 6HZ7 | 0313 | 2022-12-13 | 2018-10-22 | 4.3 | 4.43 | 4.32 | 4.3 | 0.008 | 0.97 | 0.0 | 0.05 | 14.60 | 0.01 | 1.959 | 2.92 | 0.59 | 2.9 | 97.1 | 0.0 | -0.47 | 0.81 | 0.76 | — | 4.3 | 0.005 | 0.65 | 0.0 | 0.04 | 14.36 | 0.00 | 1.790 | 15.52 | 0.05 | 5.8 | 94.2 | 0.0 | -0.40 | 1.19 | 0.83 | 0.79 | — | 67582 | 4120 | 26 | 6 | 12 | 0 | 33368 | logfile |
✔ | 6HZ8 | 0314 | 2022-12-13 | 2018-10-22 | 4.3 | 4.47 | 4.31 | 4.4 | 0.009 | 0.99 | 0.0 | 0.05 | 14.59 | 0.01 | 1.943 | 3.32 | 0.59 | 2.7 | 97.3 | 0.0 | -0.48 | 0.77 | 0.73 | — | 4.4 | 0.005 | 0.66 | 0.0 | 0.04 | 14.48 | 0.00 | 1.755 | 14.03 | 0.00 | 5.1 | 94.9 | 0.0 | -0.37 | 1.89 | 0.79 | 0.76 | — | 67582 | 4120 | 26 | 6 | 12 | 0 | 33368 | logfile |
✔ | 6HZ9 | 0315 | 2022-12-13 | 2018-10-22 | 4.8 | 4.94 | 4.76 | 4.8 | 0.009 | 1.01 | 0.0 | 0.05 | 14.59 | 0.01 | 1.957 | 3.28 | 0.51 | 2.9 | 97.1 | 0.0 | -0.60 | 0.83 | 0.76 | — | 4.8 | 0.005 | 0.66 | 0.0 | 0.04 | 14.31 | 0.00 | 1.746 | 18.09 | 0.00 | 5.3 | 94.7 | 0.0 | -0.29 | 2.16 | 0.85 | 0.78 | — | 67582 | 4120 | 26 | 6 | 12 | 0 | 33368 | logfile |
✔ | 6i00 | 0320 | 2022-12-15 | 2018-10-24 | 3.4 | 3.52 | — | 3.5 | 0.010 | 1.58 | 25.0 | 0.11 | 11.84 | 0.02 | 2.285 | 7.17 | 2.72 | 16.2 | 83.0 | 0.7 | -5.33 | 0.58 | 0.91 | 4.26 | 3.5 | 0.004 | 0.71 | 0.0 | 0.05 | 15.54 | 0.00 | 2.115 | 7.37 | 0.46 | 12.0 | 87.7 | 0.4 | -2.64 | 4.31 | 0.58 | 0.89 | 2.74 | 26712 | 3468 | 12 | 0 | 0 | 0 | 0 | logfile |
✔ | 6i0Y | 0322 | 2022-12-16 | 2018-10-26 | 3.2 | 4.80 | — | 4.7 | 0.010 | 1.49 | 8.0 | 0.07 | 15.55 | 0.01 | 0.682 | 13.08 | 11.41 | 16.0 | 77.5 | 6.5 | -5.00 | 0.59 | 0.58 | 0.26 | 4.7 | 0.007 | 0.90 | 0.0 | 0.04 | 16.25 | 0.01 | 0.951 | 24.84 | 1.25 | 14.6 | 83.4 | 2.0 | -2.93 | 1.61 | 0.61 | 0.73 | 0.89 | 93619 | 3551 | 48 | 3049 | 144 | 439 | 0 | logfile |
✘ | 6i1X | 0326 | 2022-12-19 | 2018-10-30 | 3.7 | 3.83 | — | 3.8 | 0.013 | 1.81 | 34.0 | 0.10 | 14.94 | 0.01 | 0.458 | 50.06 | 4.35 | 7.5 | 90.6 | 1.9 | -3.51 | 0.50 | 0.32 | 0.28 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 54915 | 7290 | 15 | 0 | 0 | 0 | 0 | logfile |
✔ | 6i1Y | 0327 | 2022-12-12 | 2018-10-30 | 3.4 | 3.52 | — | 3.4 | 0.015 | 2.01 | 16.0 | 0.10 | 13.31 | 0.02 | 1.301 | 75.63 | 0.72 | 10.9 | 85.8 | 3.3 | -5.20 | 0.79 | 0.83 | 1.55 | 3.4 | 0.004 | 0.73 | 0.0 | 0.05 | 16.01 | 0.01 | 2.155 | 16.11 | 0.27 | 4.9 | 94.9 | 0.2 | -1.67 | 1.47 | 0.78 | 0.81 | 1.65 | 56520 | 7440 | 15 | 0 | 0 | 0 | 0 | logfile |