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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 7UDC | 26456 | 2022-12-12 | 2022-03-18 | 3.7 | 3.83 | 3.54 | 3.8 | 0.003 | 0.54 | 0.0 | 0.04 | 14.90 | 0.00 | 2.200 | 7.93 | 0.28 | 3.3 | 96.7 | 0.0 | 1.79 | 0.71 | 0.80 | 1.93 | 3.8 | 0.003 | 0.52 | 0.0 | 0.04 | 16.89 | 0.00 | 2.102 | 6.53 | 0.14 | 3.2 | 96.8 | 0.0 | 2.35 | 0.37 | 0.74 | 0.82 | 1.62 | 6425 | 806 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 7Q2Z | 13786 | 2022-12-12 | 2021-10-26 | 3.2 | 2.91 | 3.15 | 3.2 | 0.002 | 0.48 | 0.0 | 0.03 | 18.78 | 0.00 | 2.227 | 4.26 | 0.00 | 6.5 | 93.4 | 0.1 | -1.44 | 0.67 | 0.80 | 2.05 | 3.2 | 0.003 | 0.54 | 0.0 | 0.03 | 19.96 | 0.00 | 2.121 | 3.52 | 0.12 | 2.9 | 97.0 | 0.1 | 2.02 | 1.23 | 0.70 | 0.86 | 1.90 | 8258 | 902 | 4 | 46 | 0 | 0 | 0 | logfile |
✔ | 7TDo | 25837 | 2022-12-14 | 2022-01-02 | 3.15 | 4.00 | — | 3.7 | 0.004 | 0.57 | 0.0 | 0.04 | 14.51 | 0.00 | 2.284 | 4.72 | 0.00 | 4.1 | 95.9 | 0.0 | -1.16 | 0.73 | 0.68 | 1.65 | 3.7 | 0.004 | 0.63 | 0.0 | 0.04 | 14.65 | 0.00 | 2.235 | 5.05 | 0.20 | 4.5 | 95.5 | 0.0 | 0.97 | 0.61 | 0.86 | 0.85 | 1.81 | 19572 | 2520 | 12 | 0 | 6 | 0 | 0 | logfile |
✔ | 7TYN | 26188 | 2022-12-12 | 2022-02-13 | 2.6 | 2.72 | 2.56 | 2.8 | 0.004 | 0.62 | 1.0 | 0.04 | 13.41 | 0.00 | 2.216 | 5.75 | 2.01 | 1.2 | 98.8 | 0.0 | -2.90 | 0.67 | 0.81 | 3.62 | 2.8 | 0.002 | 0.54 | 0.0 | 0.04 | 16.23 | 0.00 | 2.215 | 6.44 | 2.64 | 1.3 | 98.7 | 0.0 | 0.85 | 0.48 | 0.68 | 0.84 | 3.20 | 9364 | 1154 | 7 | 0 | 18 | 0 | 0 | logfile |
✔ | 7N28 | 24128 | 2022-12-16 | 2021-05-28 | 4.2 | 4.38 | 4.07 | 4.2 | 0.003 | 0.61 | 1.0 | 0.05 | 14.34 | 0.00 | 2.103 | 12.17 | 0.16 | 7.9 | 92.1 | 0.0 | -1.88 | 0.85 | 0.79 | — | 4.2 | 0.003 | 0.60 | 0.0 | 0.05 | 14.27 | 0.00 | 2.092 | 13.36 | 0.10 | 7.7 | 92.3 | 0.0 | -1.64 | 0.35 | 0.85 | 0.79 | — | 29461 | 3523 | 58 | 0 | 140 | 0 | 0 | logfile |
✔ | 7EJC | 31158 | 2022-12-11 | 2021-04-02 | 2.97 | 3.25 | — | 3.0 | 0.011 | 1.18 | 0.0 | 0.05 | 15.46 | 0.00 | 1.616 | 10.93 | 4.17 | 5.2 | 94.4 | 0.3 | -3.39 | 0.63 | 0.84 | 3.61 | 3.0 | 0.003 | 0.63 | 0.0 | 0.04 | 16.41 | 0.00 | 2.012 | 8.63 | 1.88 | 3.9 | 96.1 | 0.0 | -0.07 | 1.42 | 0.68 | 0.91 | 2.92 | 7485 | 930 | 7 | 9 | 9 | 0 | 0 | logfile |
✔ | 7T6U | 25728 | 2022-12-12 | 2021-12-14 | 2.9 | 2.23 | — | 1.9 | 0.006 | 1.00 | 5.0 | 0.06 | 12.93 | 0.01 | 2.315 | 3.82 | 0.31 | 2.0 | 98.0 | 0.0 | -3.84 | 0.76 | 0.78 | 4.04 | 2.0 | 0.003 | 0.63 | 1.0 | 0.04 | 16.09 | 0.00 | 2.126 | 9.64 | 2.14 | 2.5 | 97.5 | 0.0 | 0.33 | 1.21 | 0.79 | 0.81 | 3.23 | 9033 | 1152 | 6 | 0 | 2 | 0 | 0 | logfile |
✔ | 7VGi | 31970 | 2022-12-12 | 2021-09-16 | 3.36 | 3.08 | — | 3.3 | 0.005 | 0.74 | 0.0 | 0.05 | 15.16 | 0.00 | 2.032 | 9.42 | 0.38 | 10.5 | 89.3 | 0.2 | -4.39 | 0.68 | 0.83 | 3.20 | 3.3 | 0.003 | 0.59 | 0.0 | 0.04 | 16.48 | 0.00 | 2.024 | 6.91 | 0.15 | 8.7 | 91.3 | 0.0 | -2.07 | 0.40 | 0.68 | 0.84 | 2.18 | 12174 | 1493 | 6 | 0 | 8 | 0 | 0 | logfile |
✔ | 7SLQ | 25198 | 2022-12-11 | 2021-10-24 | 3.7 | 3.95 | — | 3.9 | 0.011 | 1.16 | 1.0 | 0.06 | 14.97 | 0.01 | 2.144 | 6.53 | 1.35 | 3.7 | 96.3 | 0.0 | -2.83 | 0.74 | 0.70 | 2.35 | 3.9 | 0.002 | 0.57 | 0.0 | 0.04 | 16.07 | 0.01 | 1.398 | 8.29 | 0.45 | 4.0 | 96.0 | 0.0 | 0.04 | 1.31 | 0.74 | 0.72 | 1.50 | 5451 | 559 | 4 | 50 | 1 | 0 | 0 | logfile |
✘ | 7F4V | 31455 | 2022-12-19 | 2021-06-21 | 2.04 | 1.80 | — | 2.0 | 0.025 | 2.42 | 0.0 | 0.08 | 19.55 | 0.03 | 1.203 | 4.76 | 2.78 | 3.0 | 96.9 | 0.1 | -2.15 | 0.70 | 0.83 | 6.48 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 67641 | 6336 | 78 | 0 | 453 | 402 | 0 | logfile |
✔ | 7SLP | 25197 | 2022-12-11 | 2021-10-24 | 4.1 | 4.19 | — | 4.2 | 0.008 | 1.22 | 1.0 | 0.07 | 17.08 | 0.01 | 2.221 | 7.19 | 1.77 | 4.2 | 95.3 | 0.5 | -3.76 | 0.62 | 0.56 | — | 4.1 | 0.003 | 0.66 | 0.0 | 0.04 | 15.16 | 0.01 | 2.163 | 12.65 | 0.00 | 4.4 | 95.6 | 0.0 | -0.17 | 1.44 | 0.70 | 0.71 | — | 5176 | 561 | 4 | 37 | 0 | 0 | 0 | logfile |
✔ | 7T6T | 25727 | 2022-12-11 | 2021-12-14 | 3.2 | 2.74 | — | 3.3 | 0.011 | 1.55 | 0.0 | 0.10 | 13.22 | 0.01 | 2.223 | 14.12 | 1.16 | 2.0 | 98.0 | 0.0 | 0.19 | 0.68 | 0.80 | 2.07 | 3.3 | 0.004 | 0.72 | 0.0 | 0.04 | 16.58 | 0.00 | 2.159 | 13.22 | 0.26 | 2.2 | 97.8 | 0.0 | -0.20 | 0.71 | 0.67 | 0.82 | 2.25 | 7164 | 908 | 5 | 0 | 2 | 0 | 0 | logfile |
✔ | 7T6S | 25726 | 2022-12-12 | 2021-12-14 | 3.0 | 2.75 | — | 3.0 | 0.013 | 1.29 | 3.0 | 0.10 | 13.45 | 0.01 | 2.223 | 9.52 | 0.10 | 2.2 | 97.8 | 0.0 | -0.64 | 0.60 | 0.81 | 3.66 | 3.0 | 0.003 | 0.59 | 0.0 | 0.04 | 15.73 | 0.00 | 2.138 | 9.91 | 1.96 | 2.9 | 97.1 | 0.0 | -0.37 | 1.15 | 0.60 | 0.83 | 3.32 | 8906 | 1136 | 5 | 0 | 1 | 0 | 0 | logfile |
✔ | 7T6V | 25729 | 2022-12-12 | 2021-12-14 | 3.1 | 2.67 | — | 3.2 | 0.011 | 1.26 | 3.0 | 0.09 | 12.33 | 0.01 | 2.047 | 7.77 | 0.10 | 2.1 | 97.9 | 0.0 | 1.19 | 0.76 | 0.81 | 2.45 | 3.2 | 0.003 | 0.64 | 0.0 | 0.04 | 15.22 | 0.00 | 2.193 | 8.94 | 0.21 | 1.9 | 98.1 | 0.0 | 0.76 | 0.50 | 0.77 | 0.84 | 2.15 | 8949 | 1142 | 7 | 0 | 1 | 0 | 0 | logfile |
✔ | 7V9L | 31824 | 2022-12-11 | 2021-08-26 | 2.6 | 2.13 | — | 1.8 | 0.004 | 0.69 | 0.0 | 0.05 | 13.08 | 0.01 | 2.120 | 4.19 | 0.00 | 3.8 | 96.2 | 0.0 | 0.00 | 0.67 | 0.70 | 3.73 | 1.9 | 0.003 | 0.59 | 0.0 | 0.04 | 15.79 | 0.00 | 2.135 | 10.88 | 1.38 | 2.2 | 97.8 | 0.0 | 0.96 | 0.50 | 0.77 | 0.79 | 2.85 | 8047 | 1019 | 5 | 0 | 0 | 0 | 0 | logfile |
✔ | 7S82 | 24889 | 2022-12-12 | 2021-09-17 | 3.5 | 3.79 | 3.54 | 3.8 | 0.005 | 0.72 | 0.0 | 0.04 | 13.22 | 0.00 | 2.097 | 17.81 | 0.00 | 7.7 | 92.3 | 0.0 | -1.35 | 0.78 | 0.82 | 2.97 | 3.8 | 0.003 | 0.68 | 0.0 | 0.04 | 15.68 | 0.00 | 2.212 | 15.64 | 0.37 | 4.6 | 95.4 | 0.0 | -1.16 | 1.57 | 0.78 | 0.82 | 2.07 | 4904 | 634 | 4 | 0 | 0 | 0 | 0 | logfile |
✔ | 7VB7 | 31874 | 2022-12-16 | 2021-08-30 | 2.4 | 2.41 | — | 2.4 | 0.007 | 0.77 | 1.0 | 0.05 | 16.55 | 0.01 | 1.988 | 8.40 | 1.28 | 3.0 | 96.9 | 0.1 | 0.48 | 0.76 | 0.90 | 5.52 | 2.4 | 0.004 | 0.63 | 0.0 | 0.05 | 16.86 | 0.01 | 2.065 | 6.61 | 1.78 | 3.3 | 96.6 | 0.0 | 0.48 | 0.23 | 0.77 | 0.92 | 5.52 | 29279 | 3543 | 45 | 0 | 19 | 736 | 0 | logfile |
✘ | 7VBN | 31883 | 2022-12-18 | 2021-08-31 | 2.4 | 2.48 | — | 2.5 | 0.006 | 0.75 | 2.0 | 0.05 | 16.55 | 0.01 | 2.002 | 10.85 | 1.39 | 3.1 | 96.8 | 0.1 | 0.39 | 0.78 | 0.89 | 4.54 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 29042 | 3522 | 44 | 0 | 17 | 713 | 0 | logfile |
✔ | 7VWJ | 32154 | 2022-12-16 | 2021-11-10 | 2.6 | 2.67 | — | 2.7 | 0.007 | 0.72 | 0.0 | 0.04 | 14.15 | 0.01 | 1.965 | 9.78 | 0.13 | 2.9 | 97.0 | 0.0 | 0.65 | 0.77 | 0.89 | 4.69 | 2.6 | 0.003 | 0.54 | 0.0 | 0.04 | 16.42 | 0.00 | 2.130 | 9.12 | 1.44 | 3.1 | 96.8 | 0.0 | 0.49 | 0.32 | 0.78 | 0.91 | 4.26 | 28748 | 3488 | 44 | 0 | 17 | 711 | 0 | logfile |
✔ | 7TPJ | 26057 | 2022-12-11 | 2022-01-25 | 3.46 | 3.68 | — | 3.7 | 0.004 | 0.70 | 0.0 | 0.04 | 14.42 | 0.01 | 2.159 | 9.09 | 0.00 | 5.0 | 95.0 | 0.0 | -0.01 | 0.57 | 0.69 | 1.76 | 3.7 | 0.003 | 0.62 | 0.0 | 0.04 | 16.04 | 0.00 | 2.254 | 9.09 | 0.60 | 4.8 | 95.2 | 0.0 | 0.77 | 1.43 | 0.58 | 0.72 | 1.71 | 4758 | 626 | 3 | 0 | 0 | 0 | 0 | logfile |