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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 7oTY | 13069 | 2023-11-20 | 2021-06-10 | 2.96 | 3.20 | — | 3.1 | 0.013 | 1.08 | 1.0 | 0.06 | 14.42 | 0.01 | 1.177 | 19.52 | 0.75 | 10.1 | 89.7 | 0.2 | -2.22 | 0.75 | 0.78 | 1.93 | 3.2 | 0.003 | 0.71 | 0.0 | 0.04 | 16.53 | 0.00 | 2.173 | 11.20 | 1.28 | 6.9 | 93.0 | 0.0 | -0.31 | 0.50 | 0.76 | 0.79 | 1.47 | 29034 | 3636 | 1 | 0 | 21 | 0 | 0 | logfile |
✔ | 7XT4 | 33439 | 2023-11-16 | 2022-05-16 | 3.08 | 2.22 | 2.99 | 2.0 | 0.006 | 0.91 | 1.0 | 0.06 | 17.94 | 0.01 | 2.244 | 4.64 | 3.70 | 5.0 | 94.8 | 0.2 | -2.53 | 0.80 | 0.80 | 3.42 | 2.0 | 0.007 | 0.71 | 0.0 | 0.05 | 18.46 | 0.00 | 2.162 | 8.64 | 0.65 | 5.2 | 94.7 | 0.1 | 0.16 | 1.44 | 0.81 | 0.82 | 3.07 | 16850 | 1939 | 5 | 55 | 4 | 0 | 0 | logfile |
✔ | 7V0X | 26952 | 2023-11-13 | 2022-05-11 | 3.0 | 2.83 | 2.92 | 2.9 | 0.002 | 0.63 | 0.0 | 0.04 | 19.06 | 0.01 | 2.211 | 6.52 | 5.05 | 4.0 | 96.0 | 0.0 | 0.72 | 0.61 | 0.88 | 3.78 | 2.9 | 0.002 | 0.53 | 0.0 | 0.04 | 19.08 | 0.00 | 2.176 | 7.23 | 4.38 | 4.9 | 95.1 | 0.0 | 1.77 | 0.47 | 0.60 | 0.88 | 3.17 | 2818 | 375 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 7T23 | 25610 | 2023-11-18 | 2021-12-02 | 4.2 | 4.50 | — | 4.2 | 0.004 | 1.43 | 0.0 | 0.04 | 9.48 | 0.00 | 1.991 | 5.08 | 1.51 | 2.3 | 97.5 | 0.2 | 1.97 | 0.82 | 0.73 | — | 4.2 | 0.003 | 1.07 | 0.0 | 0.04 | 11.88 | 0.00 | 1.100 | 17.03 | 0.04 | 3.0 | 96.8 | 0.2 | 0.47 | 0.96 | 0.83 | 0.77 | — | 23507 | 2954 | 14 | 13 | 15 | 0 | 0 | logfile |
✔ | 8G0C | 29653 | 2023-11-17 | 2023-01-31 | 2.8 | 3.69 | 2.84 | 2.8 | 0.005 | 0.85 | 0.0 | 0.17 | 6.89 | 0.00 | 1.814 | 0.39 | 0.00 | 2.6 | 97.3 | 0.0 | 0.98 | 0.69 | 0.67 | — | 2.8 | 0.008 | 0.93 | 0.0 | 0.08 | 6.76 | 0.00 | 1.750 | 3.64 | 0.00 | 10.1 | 89.8 | 0.1 | -0.16 | 1.22 | 0.79 | 0.81 | — | 19874 | 4860 | 30 | 0 | 16 | 0 | 0 | logfile |
✘ | 7VFV | 31960 | 2023-11-17 | 2021-09-13 | 3.0 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 19776 | 2383 | 8 | 0 | 40 | 0 | 0 | logfile |
✔ | 7Mo9 | 23921 | 2023-11-14 | 2021-05-01 | 4.0 | 3.76 | — | 4.0 | 0.010 | 1.23 | 0.0 | 0.06 | 16.04 | 0.01 | 1.983 | 34.57 | 0.38 | 9.2 | 90.8 | 0.0 | -2.30 | 0.77 | 0.81 | — | 4.0 | 0.004 | 0.75 | 0.0 | 0.05 | 16.53 | 0.00 | 2.127 | 20.76 | 0.38 | 6.9 | 93.1 | 0.0 | -1.49 | 1.17 | 0.77 | 0.81 | — | 9755 | 1247 | 4 | 0 | 6 | 0 | 0 | logfile |
✔ | 7APD | 11852 | 2023-11-17 | 2020-10-16 | 3.9 | 4.06 | — | 4.0 | 0.006 | 0.84 | 0.0 | 0.05 | 19.77 | 0.00 | 1.349 | 19.29 | 2.92 | 8.5 | 91.4 | 0.1 | -1.98 | 0.76 | 0.73 | 1.33 | 4.0 | 0.003 | 0.57 | 0.0 | 0.04 | 19.71 | 0.00 | 2.091 | 9.42 | 0.13 | 5.3 | 94.7 | 0.0 | -0.20 | 1.21 | 0.78 | 0.76 | 0.86 | 17296 | 2020 | 10 | 76 | 0 | 0 | 0 | logfile |
✔ | 7oP1 | 13011 | 2023-11-14 | 2021-05-28 | 3.7 | 3.77 | — | 3.6 | 0.004 | 1.16 | 0.0 | 0.04 | 13.67 | 0.00 | 1.848 | 7.11 | 0.00 | 4.7 | 95.3 | 0.0 | -0.69 | 0.69 | 0.87 | 2.43 | 3.6 | 0.003 | 0.55 | 0.0 | 0.04 | 14.97 | 0.00 | 1.681 | 5.18 | 0.10 | 3.8 | 96.2 | 0.0 | 0.47 | 0.30 | 0.70 | 0.86 | 1.63 | 8744 | 1098 | 1 | 0 | 3 | 0 | 0 | logfile |
✔ | 8G0A | 29651 | 2023-11-21 | 2023-01-31 | 2.9 | 3.69 | 2.92 | 3.4 | 0.007 | 0.78 | 3.0 | 0.05 | 13.53 | 0.01 | 1.816 | 7.95 | 1.12 | 2.3 | 97.6 | 0.0 | 0.37 | 0.81 | 0.78 | 3.60 | 3.4 | 0.004 | 0.83 | 1.0 | 0.05 | 15.51 | 0.00 | 1.894 | 15.94 | 1.76 | 2.4 | 97.6 | 0.0 | 1.13 | 0.81 | 0.80 | 0.84 | 2.60 | 35630 | 4861 | 26 | 0 | 10 | 0 | 0 | logfile |
✔ | 7PBD | 13290 | 2023-11-16 | 2021-08-02 | 3.04 | 3.81 | 3.11 | 3.5 | 0.005 | 0.76 | 0.0 | 0.10 | 13.11 | 0.00 | 2.062 | 4.44 | 0.00 | 3.8 | 96.2 | 0.0 | 0.14 | 0.77 | 0.82 | 3.43 | 3.4 | 0.004 | 0.63 | 0.0 | 0.04 | 14.23 | 0.00 | 2.179 | 6.81 | 0.32 | 3.1 | 96.8 | 0.1 | 0.95 | 1.14 | 0.78 | 0.85 | 2.91 | 14822 | 1784 | 15 | 0 | 25 | 0 | 0 | logfile |
✘ | 7RL9 | 24522 | 2023-11-21 | 2021-07-23 | 3.3 | 3.87 | — | 3.6 | 0.003 | 0.73 | 0.0 | 0.04 | 11.05 | 0.00 | 2.210 | 9.51 | 0.00 | 8.1 | 91.6 | 0.3 | -1.82 | 0.82 | 0.81 | 1.73 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 35220 | 4464 | 12 | 0 | 12 | 0 | 0 | logfile |
✔ | 6VoY | 21301 | 2023-11-17 | 2020-02-01 | 3.7 | 4.09 | — | 4.0 | 0.013 | 1.52 | 30.0 | 0.10 | 24.39 | 0.01 | 1.583 | 35.03 | 0.46 | 2.4 | 97.6 | 0.0 | -6.32 | 0.69 | 0.82 | 2.12 | 4.0 | 0.004 | 0.97 | 0.0 | 0.05 | 24.42 | 0.00 | 2.019 | 18.09 | 0.40 | 12.3 | 87.6 | 0.1 | -2.69 | 1.13 | 0.67 | 0.79 | 1.06 | 17556 | 1724 | 16 | 180 | 6 | 0 | 0 | logfile |
✔ | 7YCG | 33738 | 2023-11-14 | 2022-07-01 | 3.18 | 4.71 | 3.37 | 3.5 | 0.002 | 0.50 | 0.0 | 0.03 | 14.85 | 0.00 | 1.893 | 15.83 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.94 | 0.84 | — | 3.5 | 0.007 | 0.67 | 0.0 | 0.04 | 15.91 | 0.00 | 1.847 | 33.58 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.32 | 0.95 | 0.90 | — | 8661 | 0 | 2 | 404 | 4 | 0 | 0 | logfile |
✔ | 7PQX | 13606 | 2023-11-14 | 2021-09-20 | 3.08 | 3.48 | — | 3.4 | 0.010 | 1.11 | 0.0 | 0.06 | 14.20 | 0.01 | 2.296 | 4.37 | 0.00 | 4.3 | 95.7 | 0.0 | -2.13 | 0.69 | 0.85 | 2.92 | 3.4 | 0.004 | 0.63 | 0.0 | 0.04 | 15.53 | 0.00 | 2.140 | 9.13 | 0.73 | 3.5 | 96.5 | 0.0 | 1.41 | 0.94 | 0.69 | 0.87 | 2.34 | 9032 | 1160 | 2 | 0 | 0 | 0 | 0 | logfile |
✘ | 6X2L | 22011 | 2023-11-14 | 2020-05-20 | 2.85 | 2.95 | — | 2.9 | 0.009 | 0.96 | 0.0 | 0.06 | 13.68 | 0.01 | 2.078 | 2.99 | 0.00 | 2.5 | 97.5 | 0.0 | -6.46 | 0.64 | 0.88 | 2.92 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 9396 | 1233 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 7LBE | 23252 | 2023-11-15 | 2021-01-07 | 2.9 | 3.31 | — | 3.2 | 0.003 | 0.51 | 0.0 | 0.04 | 12.89 | 0.00 | 2.200 | 3.47 | 0.00 | 2.8 | 97.2 | 0.0 | 1.20 | 0.69 | 0.82 | 3.12 | 3.2 | 0.004 | 0.62 | 0.0 | 0.04 | 16.06 | 0.00 | 2.117 | 7.62 | 1.50 | 3.5 | 96.5 | 0.0 | 0.74 | 0.45 | 0.70 | 0.85 | 3.00 | 13511 | 1653 | 13 | 0 | 27 | 0 | 0 | logfile |
✔ | 7QH2 | 13960 | 2023-11-16 | 2021-12-10 | 2.43 | 3.08 | — | 2.8 | 0.008 | 1.01 | 0.0 | 0.06 | 15.06 | 0.01 | 1.674 | 6.99 | 2.88 | 3.3 | 96.4 | 0.2 | -4.15 | 0.84 | 0.85 | 4.97 | 2.8 | 0.003 | 0.58 | 0.0 | 0.04 | 15.19 | 0.00 | 2.009 | 7.31 | 1.39 | 2.6 | 97.2 | 0.2 | 0.21 | 1.04 | 0.84 | 0.87 | 4.52 | 16808 | 2138 | 14 | 0 | 8 | 2 | 0 | logfile |
✔ | 7RE2 | 24431 | 2023-11-16 | 2021-07-12 | 3.17 | 3.46 | — | 3.4 | 0.007 | 0.65 | 0.0 | 0.14 | 12.80 | 0.00 | 1.932 | 8.83 | 2.42 | 5.0 | 95.0 | 0.0 | -0.57 | 0.77 | 0.83 | 3.11 | 3.4 | 0.002 | 0.54 | 0.0 | 0.04 | 14.36 | 0.00 | 2.076 | 8.98 | 0.35 | 4.0 | 96.0 | 0.0 | -0.04 | 1.11 | 0.77 | 0.86 | 2.24 | 17096 | 1963 | 9 | 71 | 13 | 0 | 0 | logfile |
✔ | 7PRU | 13610 | 2023-11-14 | 2021-09-22 | 3.2 | 3.55 | 3.24 | 3.5 | 0.010 | 1.05 | 0.0 | 0.06 | 14.41 | 0.01 | 2.128 | 9.65 | 0.00 | 6.8 | 93.2 | 0.0 | -2.01 | 0.67 | 0.83 | 2.06 | 3.5 | 0.004 | 0.67 | 0.0 | 0.04 | 16.19 | 0.00 | 2.166 | 10.90 | 0.21 | 5.3 | 94.7 | 0.0 | 0.70 | 0.92 | 0.66 | 0.84 | 1.75 | 9116 | 1164 | 4 | 0 | 2 | 0 | 0 | logfile |