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Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 7M1P | 23617 | 2023-11-15 | 2021-03-14 | 3.6 | 3.93 | — | 3.9 | 0.003 | 0.61 | 0.0 | 0.04 | 13.10 | 0.00 | 2.226 | 8.07 | 0.00 | 9.4 | 90.4 | 0.2 | -0.96 | 0.68 | 0.74 | 1.70 | 3.8 | 0.003 | 0.63 | 0.0 | 0.04 | 14.49 | 0.00 | 2.182 | 9.45 | 0.27 | 10.5 | 89.4 | 0.1 | -1.10 | 0.32 | 0.69 | 0.76 | 1.15 | 13511 | 1938 | 5 | 0 | 13 | 1 | 0 | logfile |
✔ | 8DGF | 27422 | 2023-11-15 | 2022-06-23 | 2.9 | 2.47 | 3.10 | 2.7 | 0.009 | 1.21 | 0.0 | 0.06 | 14.26 | 0.01 | 2.088 | 1.38 | 0.53 | 2.2 | 97.8 | 0.0 | -0.06 | 0.48 | 0.56 | 2.47 | 2.4 | 0.003 | 0.60 | 0.0 | 0.04 | 16.44 | 0.00 | 2.169 | 6.90 | 1.76 | 2.4 | 97.6 | 0.0 | 0.67 | 0.81 | 0.50 | 0.61 | 1.75 | 64958 | 7902 | 12 | 0 | 8 | 0 | 0 | logfile |
✔ | 8E2i | 27837 | 2023-11-21 | 2022-08-15 | 3.04 | 3.45 | 3.37 | 3.1 | 0.004 | 0.60 | 0.0 | 0.04 | 15.47 | 0.00 | 1.925 | 7.78 | 0.83 | 1.8 | 98.2 | 0.0 | 1.23 | 0.64 | 0.64 | 1.06 | 3.2 | 0.003 | 0.61 | 0.0 | 0.04 | 15.97 | 0.00 | 1.939 | 12.77 | 0.31 | 3.4 | 96.6 | 0.0 | 0.90 | 0.87 | 0.65 | 0.66 | 0.98 | 92676 | 5836 | 6 | 0 | 114 | 0 | 46502 | logfile |
✔ | 7WVN | 32854 | 2023-11-19 | 2022-02-10 | 3.4 | 2.96 | — | 3.5 | 0.006 | 0.83 | 0.0 | 0.05 | 8.23 | 0.01 | 2.348 | 1.91 | 0.11 | 3.7 | 96.2 | 0.1 | -3.13 | 0.72 | 0.68 | 1.19 | 3.5 | 0.004 | 0.76 | 0.0 | 0.05 | 14.62 | 0.00 | 2.080 | 12.93 | 0.69 | 3.1 | 96.9 | 0.0 | -0.23 | 1.22 | 0.79 | 0.78 | 1.62 | 24805 | 3162 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 7NXF | 12638 | 2023-11-13 | 2021-03-18 | 3.1 | 4.01 | 3.17 | 3.6 | 0.006 | 0.82 | 0.0 | 0.04 | 14.20 | 0.01 | 2.281 | 9.15 | 0.00 | 7.9 | 92.1 | 0.0 | -0.71 | 0.60 | 0.80 | 1.58 | 3.7 | 0.005 | 0.67 | 0.0 | 0.04 | 15.64 | 0.00 | 1.905 | 9.22 | 0.44 | 7.3 | 92.7 | 0.0 | 0.44 | 1.96 | 0.59 | 0.86 | 1.35 | 6405 | 829 | 1 | 0 | 3 | 0 | 0 | logfile |
✔ | 7BPA | 30149 | 2023-11-21 | 2020-03-21 | 3.3 | 3.57 | — | 3.5 | 0.009 | 1.25 | 0.0 | 0.07 | 13.69 | 0.01 | 2.169 | 3.82 | 0.03 | 5.8 | 94.2 | 0.0 | -3.01 | 0.75 | 0.83 | 2.37 | 3.5 | 0.003 | 0.64 | 0.0 | 0.04 | 15.11 | 0.00 | 2.243 | 6.11 | 0.26 | 2.7 | 97.3 | 0.0 | -0.17 | 1.17 | 0.76 | 0.85 | 1.94 | 35370 | 4452 | 12 | 0 | 12 | 0 | 0 | logfile |
✔ | 6VKS | 21228 | 2023-11-18 | 2020-01-22 | 3.02 | 3.41 | — | 3.4 | 0.006 | 0.89 | 0.0 | 0.05 | 15.05 | 0.01 | 1.946 | 8.72 | 0.00 | 3.2 | 96.8 | 0.0 | -3.88 | 0.74 | 0.79 | 2.05 | 3.3 | 0.003 | 0.58 | 0.0 | 0.04 | 15.28 | 0.00 | 2.175 | 7.45 | 0.20 | 3.3 | 96.7 | 0.0 | 0.50 | 1.24 | 0.75 | 0.84 | 2.22 | 24034 | 3131 | 6 | 0 | 18 | 0 | 0 | logfile |
✔ | 7LKP | 23409 | 2023-11-16 | 2021-02-02 | 3.27 | 3.86 | — | 3.8 | 0.006 | 0.99 | 0.0 | 0.53 | 16.73 | 0.01 | 1.954 | 19.44 | 0.60 | 5.7 | 94.3 | 0.1 | -0.89 | 0.62 | 0.74 | 1.42 | 3.8 | 0.003 | 0.85 | 0.0 | 0.08 | 17.16 | 0.00 | 2.139 | 9.28 | 0.30 | 4.2 | 95.7 | 0.1 | 0.10 | 1.19 | 0.73 | 0.83 | 1.78 | 15789 | 1941 | 4 | 0 | 29 | 0 | 0 | logfile |
✔ | 7L8D | 23230 | 2023-11-16 | 2020-12-31 | 4.6 | 4.71 | 4.48 | 4.5 | 0.022 | 1.76 | 1.0 | 0.15 | 10.14 | 0.02 | 2.339 | 2.41 | 0.00 | 1.9 | 98.1 | 0.0 | 0.57 | 0.72 | 0.77 | — | 4.5 | 0.003 | 0.70 | 0.0 | 0.04 | 12.75 | 0.00 | 2.189 | 13.68 | 0.00 | 3.3 | 96.7 | 0.0 | -0.53 | 1.41 | 0.73 | 0.80 | — | 15564 | 1662 | 49 | 0 | 309 | 0 | 0 | logfile |
✔ | 6U6i | 20666 | 2023-11-21 | 2019-08-29 | 3.12 | 3.43 | — | 3.4 | 0.006 | 0.49 | 0.0 | 0.07 | 11.32 | 0.00 | 2.029 | 6.12 | 0.00 | 7.6 | 92.4 | 0.0 | -3.59 | 0.80 | 0.80 | 4.39 | 3.3 | 0.003 | 0.48 | 0.0 | 0.04 | 13.01 | 0.00 | 2.097 | 5.71 | 0.00 | 5.0 | 95.0 | 0.0 | -0.04 | 0.51 | 0.81 | 0.83 | 4.17 | 21701 | 1496 | 9 | 0 | 11 | 0 | 10337 | logfile |
✔ | 6KoU | 0740 | 2023-11-15 | 2019-08-13 | 2.43 | 3.57 | — | 3.0 | 0.004 | 0.67 | 1.0 | 0.13 | 11.88 | 0.00 | 2.006 | 4.07 | 0.00 | 3.0 | 97.0 | 0.0 | -4.12 | 0.85 | 0.88 | 4.03 | 3.1 | 0.004 | 0.73 | 2.0 | 0.13 | 13.99 | 0.00 | 2.051 | 6.52 | 0.22 | 3.7 | 96.3 | 0.0 | 0.93 | 1.08 | 0.85 | 0.89 | 3.84 | 62209 | 3936 | 24 | 0 | 24 | 0 | 31225 | logfile |
✔ | 7L8C | 23229 | 2023-11-16 | 2020-12-31 | 3.4 | 3.54 | 3.26 | 3.5 | 0.026 | 1.74 | 5.0 | 0.16 | 10.04 | 0.01 | 2.049 | 1.27 | 0.00 | 1.7 | 98.3 | 0.0 | 0.69 | 0.73 | 0.87 | 4.33 | 3.5 | 0.003 | 0.60 | 0.0 | 0.04 | 14.27 | 0.00 | 2.167 | 5.39 | 0.07 | 2.0 | 98.0 | 0.0 | -0.01 | 1.22 | 0.71 | 0.86 | 3.12 | 15963 | 1691 | 56 | 0 | 331 | 0 | 0 | logfile |
✔ | 8SB0 | 40286 | 2023-11-17 | 2023-04-02 | 4.2 | 4.27 | 3.94 | 4.2 | 0.006 | 0.95 | 0.0 | 0.05 | 13.58 | 0.01 | 2.050 | 2.37 | 0.05 | 6.4 | 93.3 | 0.2 | -1.76 | 0.73 | 0.77 | — | 4.2 | 0.008 | 0.90 | 0.0 | 0.05 | 14.06 | 0.01 | 2.106 | 11.77 | 0.00 | 9.7 | 90.1 | 0.2 | -1.98 | 0.66 | 0.75 | 0.79 | — | 19741 | 2445 | 24 | 0 | 57 | 0 | 0 | logfile |
✔ | 8F56 | 28861 | 2023-11-16 | 2022-11-11 | 2.98 | 3.18 | 3.09 | 3.2 | 0.004 | 0.56 | 0.0 | 0.04 | 9.89 | 0.00 | 2.200 | 9.91 | 2.64 | 2.2 | 97.8 | 0.0 | 1.81 | 0.68 | 0.75 | 1.96 | 3.2 | 0.003 | 0.58 | 0.0 | 0.04 | 16.16 | 0.00 | 2.177 | 10.36 | 3.00 | 1.8 | 98.2 | 0.0 | 1.79 | 1.29 | 0.70 | 0.86 | 2.19 | 15631 | 2039 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 7T67 | 25711 | 2023-11-19 | 2021-12-13 | 3.0 | 4.53 | 3.13 | 3.0 | 0.004 | 0.76 | 0.0 | 0.05 | 13.07 | 0.01 | 2.074 | 5.55 | 0.00 | 2.8 | 97.2 | 0.0 | -0.16 | 0.85 | 0.80 | 2.60 | 3.0 | 0.003 | 0.60 | 0.0 | 0.04 | 14.43 | 0.00 | 2.142 | 8.29 | 0.56 | 3.2 | 96.8 | 0.0 | 0.42 | 0.48 | 0.88 | 0.86 | 2.41 | 24753 | 3075 | 9 | 0 | 51 | 0 | 0 | logfile |
✔ | 7B7U | 12087 | 2023-11-19 | 2020-12-11 | 2.8 | 3.48 | 2.70 | 3.0 | 0.002 | 0.59 | 0.0 | 0.04 | 13.41 | 0.00 | 2.012 | 10.30 | 0.07 | 4.8 | 95.2 | 0.0 | 0.52 | 0.85 | 0.83 | 2.14 | 3.1 | 0.004 | 0.73 | 0.0 | 0.05 | 15.90 | 0.00 | 1.952 | 14.11 | 1.74 | 5.7 | 94.3 | 0.0 | 0.35 | 0.53 | 0.86 | 0.86 | 2.15 | 25091 | 3106 | 17 | 0 | 36 | 0 | 0 | logfile |
✔ | 7K0N | 22604 | 2023-11-17 | 2020-09-04 | 3.1 | 3.55 | — | 3.5 | 0.004 | 0.69 | 0.0 | 0.04 | 13.94 | 0.00 | 2.227 | 6.22 | 0.32 | 2.5 | 97.5 | 0.0 | 0.72 | 0.73 | 0.82 | 2.88 | 3.5 | 0.002 | 0.48 | 0.0 | 0.04 | 15.30 | 0.00 | 2.253 | 5.17 | 0.05 | 2.0 | 98.0 | 0.0 | 1.15 | 1.06 | 0.72 | 0.84 | 2.63 | 18470 | 2340 | 14 | 0 | 18 | 0 | 0 | logfile |
✔ | 6XiW | 22203 | 2023-11-15 | 2020-06-22 | 2.8 | 3.04 | — | 3.0 | 0.005 | 0.86 | 0.0 | 0.04 | 15.93 | 0.00 | 2.257 | 2.98 | 0.79 | 3.8 | 96.2 | 0.0 | -1.79 | 0.55 | 0.85 | 3.36 | 3.0 | 0.002 | 0.54 | 0.0 | 0.04 | 17.30 | 0.00 | 2.240 | 5.88 | 1.82 | 2.2 | 97.8 | 0.0 | 2.00 | 2.52 | 0.53 | 0.87 | 2.47 | 11819 | 1400 | 4 | 0 | 12 | 5 | 0 | logfile |
✔ | 7WK8 | 32562 | 2023-11-13 | 2022-01-08 | 3.61 | 2.50 | — | 2.3 | 0.004 | 0.74 | 0.0 | 0.05 | 8.51 | 0.01 | 2.262 | 5.72 | 0.22 | 3.9 | 95.9 | 0.2 | -1.34 | 0.77 | 0.76 | 3.80 | 2.3 | 0.002 | 0.61 | 0.0 | 0.04 | 12.68 | 0.00 | 2.180 | 8.01 | 0.00 | 2.6 | 97.2 | 0.2 | 0.29 | 1.24 | 0.79 | 0.78 | 4.41 | 3982 | 516 | 4 | 0 | 0 | 0 | 0 | logfile |
✔ | 7L87 | 23224 | 2023-11-16 | 2020-12-31 | 3.6 | 3.72 | 3.54 | 3.7 | 0.023 | 1.76 | 2.0 | 0.15 | 10.19 | 0.02 | 2.027 | 2.02 | 0.00 | 2.4 | 97.6 | 0.0 | 0.74 | 0.70 | 0.82 | 3.36 | 3.6 | 0.006 | 0.77 | 0.0 | 0.05 | 15.44 | 0.00 | 2.142 | 8.04 | 0.47 | 5.4 | 94.6 | 0.0 | -0.53 | 1.26 | 0.70 | 0.83 | 2.63 | 15766 | 1677 | 53 | 0 | 326 | 0 | 0 | logfile |