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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 7AZP | 11950 | 2022-12-15 | 2020-11-17 | 3.5 | 3.84 | 3.46 | 3.6 | 0.004 | 0.62 | 0.0 | 0.04 | 13.41 | 0.00 | 2.210 | 10.65 | 0.71 | 3.3 | 96.7 | 0.0 | -2.29 | 0.89 | 0.86 | 0.66 | 3.6 | 0.004 | 0.67 | 0.0 | 0.04 | 14.80 | 0.00 | 2.198 | 11.85 | 0.13 | 3.3 | 96.7 | 0.0 | 0.89 | 1.63 | 0.88 | 0.85 | 1.05 | 27391 | 3675 | 7 | 0 | 0 | 0 | 0 | logfile |
✔ | 7ANZ | 11835 | 2022-12-13 | 2020-10-13 | 3.6 | 2.50 | — | 3.7 | 0.003 | 0.77 | 0.0 | 0.05 | 15.89 | 0.00 | 2.277 | 4.54 | 0.31 | 6.5 | 93.4 | 0.2 | -5.88 | 0.77 | 0.74 | 1.50 | 3.7 | 0.003 | 0.69 | 0.0 | 0.04 | 17.64 | 0.00 | 2.137 | 10.52 | 0.68 | 6.4 | 93.6 | 0.0 | -0.59 | 0.66 | 0.77 | 0.75 | 1.19 | 16751 | 2041 | 4 | 0 | 0 | 0 | 0 | logfile |
✔ | 6VE2 | 21152 | 2022-12-16 | 2019-12-28 | 4.3 | 4.80 | 4.34 | 4.2 | 0.006 | 1.23 | 0.0 | 0.07 | 5.37 | 0.01 | 2.173 | 16.97 | 0.00 | 4.7 | 94.9 | 0.5 | -0.93 | 0.83 | 0.70 | — | 4.2 | 0.007 | 1.24 | 0.0 | 0.05 | 10.04 | 0.01 | 2.049 | 33.59 | 0.00 | 21.9 | 77.6 | 0.6 | -4.75 | 1.35 | 0.89 | 0.76 | — | 30198 | 6153 | 21 | 0 | 0 | 0 | 0 | logfile |
✔ | 6XJA | 22204 | 2022-12-13 | 2020-06-23 | 4.0 | 4.11 | — | 3.7 | 0.023 | 1.93 | 31.0 | 0.12 | 18.04 | 0.01 | 0.468 | 73.79 | 18.43 | 6.1 | 92.2 | 1.7 | -1.93 | 0.69 | 0.54 | — | 3.8 | 0.004 | 0.83 | 0.0 | 0.04 | 16.65 | 0.01 | 2.093 | 25.14 | 0.52 | 8.7 | 91.1 | 0.2 | -2.40 | 2.55 | 0.75 | 0.67 | — | 16441 | 2156 | 5 | 0 | 0 | 0 | 0 | logfile |
✘ | 6RPo | 4979 | 2022-12-19 | 2019-05-14 | 2.39 | 2.44 | — | 2.4 | 0.006 | 0.92 | 0.0 | 0.05 | 15.02 | 0.01 | 2.326 | 7.31 | 0.00 | 3.7 | 95.8 | 0.5 | -2.67 | 0.72 | 0.86 | 4.83 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 101400 | 12060 | 60 | 0 | 0 | 0 | 0 | logfile |
✔ | 7B3Y | 11997 | 2022-12-16 | 2020-12-01 | 3.7 | 4.33 | — | 4.0 | 0.014 | 1.43 | 60.0 | 0.11 | 14.41 | 0.01 | 2.031 | 10.48 | 4.35 | 2.0 | 98.0 | 0.0 | -1.02 | 0.75 | 0.67 | 1.09 | 4.0 | 0.003 | 0.68 | 0.0 | 0.05 | 14.87 | 0.00 | 2.189 | 12.39 | 0.12 | 1.5 | 98.5 | 0.0 | 1.32 | 3.00 | 0.88 | 0.84 | 1.28 | 90960 | 12120 | 60 | 0 | 0 | 0 | 0 | logfile |
✔ | 6ZLT | 11273 | 2022-12-15 | 2020-07-01 | 3.9 | 3.82 | — | 3.8 | 0.005 | 0.82 | 0.0 | 0.05 | 15.48 | 0.01 | 2.198 | 6.11 | 0.98 | 8.0 | 92.0 | 0.0 | -4.15 | 0.80 | 0.79 | 2.28 | 3.8 | 0.002 | 0.63 | 0.0 | 0.04 | 16.18 | 0.00 | 2.097 | 9.78 | 0.24 | 5.0 | 95.0 | 0.0 | -1.39 | 0.57 | 0.81 | 0.81 | 1.95 | 23386 | 2970 | 4 | 0 | 0 | 0 | 0 | logfile |
✔ | 7KAL | 22774 | 2022-12-12 | 2020-10-01 | 4.0 | 4.57 | 4.10 | 4.2 | 0.002 | 0.51 | 0.0 | 0.04 | 11.87 | 0.00 | 2.262 | 5.92 | 0.00 | 2.6 | 97.3 | 0.1 | -0.72 | 0.63 | 0.82 | — | 4.2 | 0.003 | 0.68 | 0.0 | 0.04 | 14.44 | 0.00 | 2.240 | 9.07 | 0.28 | 3.1 | 96.8 | 0.1 | 1.85 | 0.59 | 0.63 | 0.83 | — | 10789 | 1429 | 7 | 0 | 0 | 0 | 0 | logfile |
✔ | 6ZLU | 11274 | 2022-12-21 | 2020-07-01 | 4.2 | 3.89 | — | 3.8 | 0.008 | 0.99 | 0.0 | 0.06 | 16.84 | 0.01 | 1.417 | 18.50 | 0.09 | 4.6 | 94.9 | 0.4 | -2.05 | 0.64 | 0.48 | — | 3.8 | 0.004 | 0.78 | 0.0 | 0.05 | 13.83 | 0.00 | 2.068 | 13.72 | 0.00 | 3.5 | 96.4 | 0.1 | -0.79 | 2.87 | 0.77 | 0.71 | — | 21700 | 2718 | 4 | 0 | 0 | 0 | 0 | logfile |
✔ | 6ZM1 | 11277 | 2022-12-18 | 2020-07-01 | 4.7 | 4.57 | — | 4.3 | 0.007 | 0.91 | 0.0 | 0.06 | 16.15 | 0.01 | 0.828 | 14.15 | 0.55 | 6.5 | 93.3 | 0.2 | -3.15 | 0.76 | 0.60 | — | 4.3 | 0.003 | 0.73 | 0.0 | 0.04 | 13.61 | 0.00 | 2.073 | 16.36 | 0.00 | 5.6 | 94.4 | 0.0 | -0.81 | 1.18 | 0.86 | 0.79 | — | 22543 | 2844 | 4 | 0 | 0 | 0 | 0 | logfile |
✔ | 7KAM | 22775 | 2022-12-12 | 2020-10-01 | 3.8 | 4.43 | 3.92 | 4.1 | 0.003 | 0.54 | 0.0 | 0.04 | 11.79 | 0.00 | 2.150 | 5.81 | 0.00 | 3.0 | 96.9 | 0.1 | -1.16 | 0.64 | 0.82 | 1.85 | 4.1 | 0.003 | 0.67 | 0.0 | 0.04 | 14.44 | 0.00 | 2.166 | 10.20 | 0.18 | 3.0 | 96.9 | 0.1 | 1.53 | 0.52 | 0.65 | 0.84 | 1.44 | 10916 | 1445 | 7 | 0 | 0 | 0 | 0 | logfile |
✔ | 6WL0 | 21814 | 2022-12-12 | 2020-04-17 | 4.4 | 4.62 | — | 4.4 | 0.006 | 0.82 | 0.0 | 0.04 | 18.91 | 0.00 | 2.353 | 8.18 | 0.00 | 0.0 | 100.0 | 0.0 | -5.48 | 0.79 | 0.88 | — | 4.4 | 0.005 | 0.97 | 0.0 | 0.04 | 14.48 | 0.00 | 2.146 | 21.73 | 0.09 | 0.4 | 99.6 | 0.0 | 0.45 | 1.67 | 0.79 | 0.85 | — | 11480 | 1476 | 41 | 0 | 0 | 0 | 0 | logfile |
✔ | 7KAT | 22783 | 2022-12-12 | 2020-10-01 | 4.4 | 5.04 | 4.41 | 4.5 | 0.002 | 0.51 | 0.0 | 0.04 | 11.32 | 0.00 | 2.185 | 6.94 | 0.00 | 1.9 | 98.1 | 0.0 | -0.63 | 0.65 | 0.83 | — | 4.5 | 0.002 | 0.57 | 0.0 | 0.04 | 12.07 | 0.00 | 2.070 | 9.45 | 0.00 | 2.1 | 97.9 | 0.0 | 2.26 | 1.32 | 0.65 | 0.85 | — | 10431 | 1340 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 6Z3Z | 11067 | 2022-12-11 | 2020-05-22 | 3.19 | 3.90 | — | 3.6 | 0.003 | 0.62 | 0.0 | 0.04 | 13.78 | 0.00 | 2.198 | 8.96 | 0.31 | 6.4 | 93.6 | 0.0 | -0.26 | 0.62 | 0.69 | 0.75 | 3.7 | 0.004 | 0.86 | 0.0 | 0.04 | 16.03 | 0.00 | 2.177 | 18.17 | 0.46 | 7.8 | 92.2 | 0.0 | -0.11 | 0.69 | 0.63 | 0.73 | 1.04 | 6115 | 769 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 7KAR | 22781 | 2022-12-12 | 2020-10-01 | 4.0 | 4.56 | 4.12 | 4.3 | 0.003 | 0.59 | 0.0 | 0.04 | 12.73 | 0.00 | 2.224 | 7.84 | 0.00 | 2.8 | 97.2 | 0.0 | -1.41 | 0.66 | 0.83 | — | 4.3 | 0.003 | 0.65 | 0.0 | 0.04 | 14.59 | 0.00 | 2.156 | 9.64 | 0.09 | 2.2 | 97.8 | 0.0 | 1.79 | 0.53 | 0.67 | 0.83 | — | 10435 | 1341 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 7K60 | 22685 | 2022-12-14 | 2020-09-17 | 3.12 | 3.33 | — | 3.2 | 0.004 | 0.64 | 0.0 | 0.04 | 26.72 | 0.00 | 2.175 | 9.38 | 0.09 | 2.0 | 98.0 | 0.0 | 0.43 | 0.74 | 0.73 | 1.70 | 3.2 | 0.003 | 0.59 | 0.0 | 0.03 | 27.28 | 0.00 | 2.146 | 10.85 | 0.63 | 2.5 | 97.5 | 0.0 | 1.09 | 0.55 | 0.75 | 0.77 | 1.43 | 18330 | 1298 | 13 | 394 | 0 | 0 | 0 | logfile |
✔ | 7BTX | 30190 | 2022-12-12 | 2020-04-03 | 2.8 | 2.99 | — | 3.0 | 0.008 | 1.09 | 2.0 | 0.06 | 14.93 | 0.01 | 2.280 | 4.59 | 0.26 | 8.1 | 91.1 | 0.7 | -4.94 | 0.68 | 0.86 | 4.33 | 3.0 | 0.003 | 0.69 | 0.0 | 0.04 | 16.76 | 0.01 | 2.189 | 8.64 | 2.03 | 8.0 | 91.8 | 0.2 | -0.71 | 0.53 | 0.65 | 0.87 | 3.94 | 10168 | 1268 | 4 | 0 | 0 | 0 | 0 | logfile |
✔ | 6RPK | 4977 | 2022-12-19 | 2019-05-14 | 2.84 | 2.92 | — | 2.9 | 0.006 | 0.83 | 0.0 | 0.05 | 13.25 | 0.01 | 0.152 | 22.63 | 0.00 | 5.5 | 94.0 | 0.5 | -3.71 | 0.71 | 0.83 | 2.92 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 103090 | 12261 | 61 | 0 | 0 | 0 | 0 | logfile |
✔ | 7KA2 | 22756 | 2022-12-12 | 2020-09-29 | 3.6 | 3.77 | — | 3.6 | 0.008 | 0.96 | 0.0 | 0.05 | 15.20 | 0.01 | 2.254 | 6.36 | 6.12 | 3.8 | 96.2 | 0.0 | -1.99 | 0.87 | 0.83 | 1.20 | 3.6 | 0.003 | 0.70 | 0.0 | 0.04 | 15.62 | 0.00 | 2.070 | 12.30 | 0.54 | 2.9 | 97.1 | 0.0 | 1.24 | 1.26 | 0.87 | 0.83 | 0.66 | 10472 | 1372 | 4 | 0 | 0 | 0 | 0 | logfile |
✔ | 6W77 | 21569 | 2022-12-22 | 2020-03-18 | 3.6 | 3.44 | — | 3.3 | 0.002 | 0.53 | 0.0 | 0.03 | 14.96 | 0.00 | 2.084 | 9.36 | 0.12 | 6.1 | 93.7 | 0.2 | -3.22 | 0.73 | 0.67 | 0.91 | 3.3 | 0.006 | 0.86 | 0.0 | 0.04 | 16.81 | 0.01 | 1.852 | 18.02 | 0.87 | 12.2 | 87.6 | 0.2 | -2.34 | 2.05 | 0.76 | 0.71 | 1.02 | 47940 | 1949 | 18 | 1519 | 0 | 0 | 0 | logfile |