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Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 7X9A | 33069 | 2023-12-08 | 2022-03-15 | 3.2 | 3.87 | — | 3.6 | 0.003 | 0.51 | 0.0 | 0.04 | 10.43 | 0.00 | 2.251 | 7.09 | 0.00 | 3.0 | 97.0 | 0.0 | -2.79 | 0.67 | 0.69 | 1.31 | 3.6 | 0.003 | 0.72 | 0.0 | 0.04 | 14.53 | 0.00 | 2.184 | 15.54 | 0.69 | 4.6 | 95.4 | 0.0 | -0.75 | 0.75 | 0.70 | 0.81 | 1.64 | 7156 | 950 | 5 | 0 | 0 | 0 | 0 | logfile |
✔ | 6ZMS | 11300 | 2023-12-09 | 2020-07-03 | 3.4 | 3.78 | — | 3.8 | 0.019 | 1.98 | 3.0 | 0.10 | 14.13 | 0.01 | 2.427 | 0.32 | 2.12 | 5.6 | 91.4 | 3.0 | -2.88 | 0.40 | 0.72 | 1.84 | 3.7 | 0.021 | 1.11 | 0.0 | 0.04 | 15.72 | 0.01 | 2.022 | 6.13 | 0.28 | 6.6 | 93.1 | 0.4 | -1.93 | 1.76 | 0.35 | 0.84 | 3.37 | 12570 | 818 | 4 | 0 | 0 | 0 | 6173 | logfile |
✔ | 7NGH | 12314 | 2023-12-09 | 2021-02-09 | 3.5 | 4.33 | — | 4.0 | 0.005 | 0.64 | 0.0 | 0.04 | 12.54 | 0.00 | 2.169 | 18.02 | 0.00 | 4.9 | 95.1 | 0.0 | -2.00 | 0.74 | 0.86 | 1.13 | 3.9 | 0.004 | 0.82 | 0.0 | 0.04 | 14.33 | 0.00 | 2.112 | 16.75 | 0.09 | 4.5 | 95.5 | 0.0 | 1.11 | 1.11 | 0.73 | 0.84 | 0.66 | 10315 | 1374 | 7 | 0 | 0 | 0 | 0 | logfile |
✔ | 7o3D | 12704 | 2023-12-09 | 2021-04-01 | 3.71 | 4.15 | 3.79 | 4.0 | 0.003 | 0.77 | 0.0 | 0.05 | 13.17 | 0.01 | 2.146 | 6.21 | 0.00 | 4.2 | 95.8 | 0.0 | -0.61 | 0.76 | 0.72 | 1.16 | 4.0 | 0.004 | 0.60 | 0.0 | 0.04 | 15.20 | 0.00 | 1.988 | 11.02 | 0.31 | 5.9 | 94.1 | 0.0 | -0.21 | 0.48 | 0.77 | 0.74 | 1.25 | 11458 | 709 | 1 | 0 | 0 | 0 | 5694 | logfile |
✔ | 6Ni2 | 9375 | 2023-12-09 | 2018-12-26 | 4.0 | 4.38 | — | 4.1 | 0.010 | 1.33 | 0.0 | 0.07 | 9.61 | 0.01 | 2.245 | 6.60 | 0.00 | 6.7 | 93.1 | 0.1 | -1.50 | 0.75 | 0.71 | — | 4.1 | 0.003 | 0.72 | 0.0 | 0.04 | 14.17 | 0.00 | 2.160 | 11.60 | 0.18 | 5.0 | 95.0 | 0.0 | 0.19 | 0.91 | 0.75 | 0.72 | — | 5381 | 704 | 5 | 0 | 0 | 0 | 0 | logfile |
✔ | 7SWN | 25476 | 2023-12-07 | 2021-11-20 | 4.3 | 3.77 | — | 3.5 | 0.007 | 1.06 | 0.0 | 0.06 | 14.58 | 0.01 | 2.203 | 41.73 | 0.00 | 21.9 | 78.1 | 0.0 | -4.82 | 0.57 | 0.68 | — | 3.5 | 0.003 | 0.82 | 0.0 | 0.05 | 13.82 | 0.01 | 2.261 | 21.52 | 0.00 | 11.3 | 88.7 | 0.0 | -3.20 | 2.08 | 0.57 | 0.68 | — | 3283 | 422 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 7BY0 | 30239 | 2023-12-09 | 2020-04-21 | 4.5 | 5.50 | — | 4.5 | 0.008 | 0.97 | 0.0 | 0.05 | 31.23 | 0.01 | 1.950 | 11.25 | 0.15 | 3.1 | 96.9 | 0.0 | -3.59 | 0.92 | 0.87 | — | 4.5 | 0.004 | 0.71 | 0.0 | 0.04 | 30.65 | 0.01 | 2.087 | 22.54 | 0.00 | 5.4 | 94.6 | 0.0 | -0.20 | 1.30 | 0.92 | 0.86 | — | 12693 | 868 | 12 | 286 | 0 | 0 | 0 | logfile |
✘ | 6PCV | 20308 | 2023-12-08 | 2019-06-18 | 3.2 | 2.93 | 3.33 | 3.3 | 0.006 | 0.98 | 0.0 | 0.06 | 14.31 | 0.01 | 2.235 | 6.90 | 0.71 | 4.0 | 96.0 | 0.0 | -3.37 | 0.71 | 0.72 | 2.68 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 9035 | 1155 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 8EHG | 28147 | 2023-12-09 | 2022-09-14 | 2.24 | 2.24 | 2.25 | 2.3 | 0.003 | 0.53 | 0.0 | 0.04 | 16.09 | 0.00 | 2.291 | 4.70 | 1.44 | 1.5 | 98.5 | 0.0 | 1.13 | 0.74 | 0.83 | 5.20 | 2.4 | 0.003 | 0.55 | 0.0 | 0.04 | 16.76 | 0.00 | 2.229 | 4.04 | 2.16 | 1.2 | 98.8 | 0.0 | 1.61 | 0.20 | 0.72 | 0.84 | 5.39 | 10472 | 1372 | 4 | 0 | 0 | 0 | 0 | logfile |
✔ | 8D3Y | 27168 | 2023-12-09 | 2022-06-01 | 3.9 | 3.70 | 3.84 | 3.7 | 0.007 | 0.81 | 0.0 | 0.04 | 17.34 | 0.01 | 2.198 | 10.16 | 0.19 | 6.7 | 93.3 | 0.0 | -0.14 | 0.60 | 0.81 | 1.42 | 3.7 | 0.002 | 0.60 | 0.0 | 0.04 | 17.51 | 0.00 | 2.202 | 8.63 | 0.19 | 5.2 | 94.7 | 0.1 | -0.16 | 0.35 | 0.60 | 0.80 | 1.33 | 9898 | 1298 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 7KAR | 22781 | 2023-12-09 | 2020-10-01 | 4.0 | 4.56 | 4.12 | 4.3 | 0.003 | 0.59 | 0.0 | 0.04 | 12.73 | 0.00 | 2.224 | 7.84 | 0.00 | 2.8 | 97.2 | 0.0 | -1.41 | 0.66 | 0.83 | — | 4.3 | 0.003 | 0.68 | 0.0 | 0.04 | 14.66 | 0.00 | 2.190 | 9.73 | 0.36 | 2.7 | 97.3 | 0.0 | 1.58 | 0.54 | 0.67 | 0.83 | — | 10435 | 1341 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 6QPi | 4614 | 2023-12-07 | 2019-02-14 | 3.3 | 3.37 | 2.73 | 3.4 | 0.005 | 0.70 | 0.0 | 0.04 | 6.59 | 0.01 | 2.432 | 2.09 | 0.00 | 1.4 | 98.6 | 0.0 | -3.02 | 0.39 | 0.62 | — | 3.3 | 0.003 | 0.53 | 0.0 | 0.04 | 5.28 | 0.00 | 2.448 | 1.19 | 0.00 | 2.6 | 97.4 | 0.0 | 1.11 | 0.59 | 0.41 | 0.64 | — | 2288 | 462 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 6GTD | 0062 | 2023-12-08 | 2018-06-18 | 4.24 | 4.28 | — | 3.9 | 0.009 | 1.26 | 0.0 | 0.08 | 22.58 | 0.01 | 2.138 | 13.01 | 0.00 | 19.8 | 80.2 | 0.0 | -5.72 | 0.78 | 0.65 | — | 3.9 | 0.007 | 0.99 | 0.0 | 0.07 | 21.81 | 0.00 | 1.927 | 29.17 | 0.00 | 24.6 | 75.4 | 0.0 | -3.67 | 0.99 | 0.79 | 0.68 | — | 6456 | 1269 | 4 | 66 | 0 | 0 | 0 | logfile |
✔ | 7KAK | 22773 | 2023-12-09 | 2020-10-01 | 3.9 | 4.59 | 4.06 | 4.2 | 0.003 | 0.54 | 0.0 | 0.04 | 11.57 | 0.00 | 2.246 | 6.34 | 0.00 | 2.9 | 97.1 | 0.0 | -1.34 | 0.66 | 0.83 | 1.49 | 4.2 | 0.005 | 0.74 | 0.0 | 0.04 | 14.15 | 0.00 | 2.194 | 13.07 | 0.57 | 3.6 | 96.4 | 0.0 | 1.59 | 0.67 | 0.66 | 0.85 | 1.52 | 10437 | 1371 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 8GPN | 34195 | 2023-12-10 | 2022-08-26 | 3.2 | 3.80 | 3.24 | 3.4 | 0.007 | 0.62 | 0.0 | 0.04 | 26.21 | 0.00 | 2.193 | 8.82 | 0.11 | 2.6 | 97.4 | 0.0 | 1.29 | 0.84 | 0.80 | 3.26 | 3.4 | 0.004 | 0.58 | 0.0 | 0.03 | 26.52 | 0.00 | 2.129 | 9.92 | 0.22 | 2.2 | 97.7 | 0.1 | 2.20 | 1.56 | 0.86 | 0.86 | 2.15 | 15047 | 1211 | 11 | 292 | 0 | 0 | 0 | logfile |
✔ | 8oHS | 16884 | 2023-12-10 | 2023-03-21 | 4.1 | 4.12 | 3.94 | 4.0 | 0.009 | 1.09 | 0.0 | 0.08 | 14.89 | 0.00 | 0.697 | 2.69 | 0.41 | 4.5 | 95.5 | 0.0 | -1.04 | 0.47 | 0.78 | — | 4.0 | 0.003 | 0.67 | 0.0 | 0.04 | 13.86 | 0.00 | 2.228 | 6.93 | 0.07 | 1.7 | 98.3 | 0.0 | 1.31 | 3.02 | 0.50 | 0.85 | — | 13335 | 1758 | 9 | 0 | 0 | 0 | 0 | logfile |
✔ | 7KAM | 22775 | 2023-12-09 | 2020-10-01 | 3.8 | 4.43 | 3.92 | 4.1 | 0.003 | 0.54 | 0.0 | 0.04 | 11.79 | 0.00 | 2.150 | 5.67 | 0.00 | 3.0 | 96.9 | 0.1 | -1.16 | 0.64 | 0.82 | 1.85 | 4.1 | 0.004 | 0.68 | 0.0 | 0.04 | 14.40 | 0.00 | 2.140 | 9.88 | 0.18 | 3.3 | 96.6 | 0.1 | 1.54 | 0.52 | 0.65 | 0.84 | 1.38 | 10916 | 1445 | 7 | 0 | 0 | 0 | 0 | logfile |
✔ | 7KAH | 22770 | 2023-12-09 | 2020-10-01 | 3.1 | 3.79 | 3.14 | 3.5 | 0.003 | 0.53 | 0.0 | 0.04 | 12.90 | 0.00 | 2.257 | 4.61 | 0.00 | 3.2 | 96.8 | 0.0 | -1.32 | 0.69 | 0.86 | 2.50 | 3.5 | 0.003 | 0.56 | 0.0 | 0.04 | 14.66 | 0.00 | 2.160 | 5.69 | 0.18 | 2.2 | 97.8 | 0.0 | 2.04 | 1.27 | 0.69 | 0.87 | 1.94 | 10495 | 1349 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 7TYJ | 26181 | 2023-12-08 | 2022-02-13 | 3.3 | 3.29 | 3.45 | 3.3 | 0.004 | 0.62 | 0.0 | 0.05 | 16.63 | 0.00 | 2.161 | 9.16 | 0.44 | 10.3 | 89.6 | 0.1 | -1.90 | 0.67 | 0.83 | 3.05 | 3.4 | 0.002 | 0.57 | 0.0 | 0.04 | 16.76 | 0.00 | 2.272 | 7.32 | 0.15 | 9.4 | 90.5 | 0.1 | -1.74 | 0.19 | 0.67 | 0.82 | 2.95 | 6338 | 808 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 7TYK | 26183 | 2023-12-09 | 2022-02-13 | 3.5 | 3.16 | — | 3.5 | 0.015 | 1.39 | 2.0 | 0.04 | 17.40 | 0.00 | 2.189 | 10.53 | 0.65 | 8.5 | 91.1 | 0.4 | -1.65 | 0.67 | 0.78 | 2.60 | 3.5 | 0.002 | 0.59 | 0.0 | 0.04 | 17.32 | 0.00 | 2.262 | 9.22 | 0.29 | 9.3 | 90.4 | 0.3 | -1.95 | 1.12 | 0.67 | 0.80 | 3.08 | 12698 | 1618 | 2 | 0 | 0 | 0 | 0 | logfile |