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Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 7DNH | 30783 | 2023-07-10 | 2020-12-09 | 3.64 | 4.22 | — | 4.2 | 0.008 | 1.08 | 0.0 | 0.06 | 15.01 | 0.01 | 1.791 | 6.16 | 0.78 | 9.6 | 90.2 | 0.2 | -4.48 | 0.39 | 0.79 | 2.34 | 4.2 | 0.005 | 0.80 | 0.0 | 0.05 | 16.29 | 0.01 | 2.142 | 15.00 | 0.66 | 9.0 | 91.0 | 0.0 | -2.66 | 1.31 | 0.38 | 0.79 | 2.02 | 21788 | 2762 | 7 | 0 | 0 | 0 | 0 | logfile |
✔ | 6C4H | 7340 | 2023-07-07 | 2018-01-12 | 3.1 | 3.33 | — | 3.3 | 0.011 | 1.20 | 1.0 | 0.11 | 16.63 | 0.05 | 1.913 | 7.67 | 6.80 | 5.3 | 94.7 | 0.0 | -2.61 | 0.43 | 0.85 | 3.61 | 3.3 | 0.008 | 0.92 | 0.0 | 0.04 | 15.55 | 0.01 | 1.783 | 7.67 | 1.36 | 5.8 | 94.2 | 0.0 | -2.30 | 0.39 | 0.39 | 0.85 | 4.75 | 15326 | 184 | 8 | 648 | 34 | 0 | 0 | logfile |
✔ | 7LiV | 23386 | 2023-07-19 | 2021-01-28 | 3.6 | 3.63 | — | 3.6 | 0.009 | 0.95 | 1.0 | 0.05 | 13.49 | 0.01 | 1.080 | 26.90 | 2.97 | 4.9 | 94.5 | 0.6 | -3.03 | 0.24 | 0.49 | 0.16 | 3.6 | 0.004 | 0.82 | 0.0 | 0.04 | 17.19 | 0.00 | 2.059 | 14.20 | 0.91 | 5.7 | 94.3 | 0.1 | -1.01 | 1.65 | 0.39 | 0.81 | 1.26 | 47058 | 5903 | 12 | 0 | 0 | 0 | 0 | logfile |
✔ | 7CG0 | 30348 | 2023-07-05 | 2020-06-30 | 3.2 | 3.51 | — | 3.5 | 0.003 | 0.53 | 0.0 | 0.04 | 11.23 | 0.00 | 1.992 | 8.37 | 2.56 | 3.0 | 97.0 | 0.0 | 3.52 | 0.37 | 0.79 | 1.26 | 3.5 | 0.003 | 0.69 | 0.0 | 0.04 | 16.05 | 0.00 | 2.053 | 11.09 | 0.88 | 2.7 | 97.3 | 0.0 | 2.95 | 0.86 | 0.39 | 0.83 | 1.21 | 10928 | 1412 | 21 | 0 | 75 | 0 | 0 | logfile |
✔ | 6QD2 | 4517 | 2023-07-10 | 2018-12-31 | 4.8 | 4.92 | 5.85 | 4.9 | 0.006 | 0.86 | 0.0 | 0.04 | 9.04 | 0.01 | 2.025 | 6.53 | 0.00 | 11.6 | 88.4 | 0.0 | -4.60 | 0.35 | 0.62 | — | 4.9 | 0.004 | 0.68 | 0.0 | 0.04 | 10.92 | 0.00 | 2.087 | 11.59 | 0.00 | 9.1 | 90.9 | 0.0 | -1.48 | 1.09 | 0.39 | 0.65 | — | 21746 | 1420 | 5 | 0 | 2 | 0 | 11100 | logfile |
✔ | 5ANB | 3146 | 2023-07-19 | 2015-09-06 | 4.1 | 4.11 | — | 4.1 | 0.008 | 1.32 | 6.0 | 0.10 | 18.54 | 0.01 | 1.245 | 5.12 | 4.33 | 13.0 | 83.9 | 3.1 | -4.17 | 0.41 | 0.75 | — | 4.0 | 0.005 | 0.85 | 0.0 | 0.04 | 17.23 | 0.01 | 1.955 | 21.18 | 0.04 | 14.6 | 84.7 | 0.7 | -3.65 | 1.60 | 0.39 | 0.70 | — | 48493 | 3025 | 12 | 1162 | 0 | 0 | 0 | logfile |
✔ | 7N5G | 24189 | 2023-07-03 | 2021-06-05 | 2.4 | 2.16 | 2.42 | 1.5 | 0.022 | 1.51 | 0.0 | 0.09 | 10.57 | 0.01 | 2.386 | 0.17 | 0.00 | 0.8 | 99.2 | 0.0 | 1.84 | 0.40 | 0.79 | 3.64 | 1.5 | 0.003 | 0.57 | 0.0 | 0.04 | 16.52 | 0.00 | 2.220 | 4.78 | 2.61 | 1.4 | 98.6 | 0.0 | 2.92 | 1.20 | 0.39 | 0.80 | 2.57 | 2926 | 371 | 1 | 0 | 1 | 0 | 0 | logfile |
✔ | 5AN9 | 3145 | 2023-07-17 | 2015-09-06 | 3.3 | 3.29 | — | 3.3 | 0.007 | 1.22 | 5.0 | 0.10 | 17.04 | 0.01 | 1.192 | 3.54 | 2.32 | 9.1 | 88.0 | 2.9 | -3.68 | 0.38 | 0.81 | 1.98 | 3.3 | 0.007 | 0.83 | 0.0 | 0.04 | 17.55 | 0.01 | 2.029 | 13.22 | 1.16 | 10.9 | 88.5 | 0.6 | -2.81 | 1.54 | 0.39 | 0.81 | 1.46 | 39693 | 1905 | 11 | 1162 | 0 | 0 | 0 | logfile |
✔ | 7KF5 | 22843 | 2023-07-19 | 2020-10-13 | 3.2 | 3.46 | — | 3.6 | 0.003 | 0.55 | 0.0 | 0.04 | 15.93 | 0.02 | 2.007 | 9.13 | 0.24 | 4.2 | 95.8 | 0.0 | -2.33 | 0.40 | 0.71 | 0.91 | 3.5 | 0.004 | 0.64 | 0.0 | 0.04 | 17.66 | 0.00 | 2.030 | 9.30 | 0.47 | 4.8 | 95.2 | 0.0 | -0.05 | 1.41 | 0.39 | 0.76 | 1.73 | 48069 | 3075 | 3 | 0 | 0 | 0 | 24414 | logfile |
✔ | 7ZSD | 14930 | 2023-07-03 | 2022-05-06 | 3.29 | 3.62 | 3.56 | 3.6 | 0.003 | 0.60 | 0.0 | 0.05 | 14.29 | 0.00 | 2.226 | 9.82 | 0.00 | 7.0 | 93.0 | 0.0 | -0.09 | 0.38 | 0.74 | 2.01 | 3.6 | 0.003 | 0.66 | 0.0 | 0.05 | 14.79 | 0.00 | 2.257 | 12.46 | 0.90 | 7.0 | 93.0 | 0.0 | -0.57 | 0.39 | 0.39 | 0.78 | 1.13 | 2120 | 261 | 3 | 0 | 2 | 0 | 0 | logfile |
✔ | 5ANC | 3147 | 2023-07-19 | 2015-09-06 | 4.2 | 4.23 | — | 4.2 | 0.008 | 1.35 | 7.0 | 0.10 | 19.00 | 0.01 | 1.236 | 6.62 | 4.21 | 13.6 | 82.7 | 3.6 | -4.33 | 0.41 | 0.74 | — | 4.2 | 0.005 | 0.90 | 0.0 | 0.05 | 17.64 | 0.01 | 2.064 | 23.42 | 0.00 | 15.3 | 83.7 | 1.0 | -4.04 | 1.59 | 0.39 | 0.70 | — | 46807 | 2801 | 11 | 1162 | 0 | 0 | 0 | logfile |
✔ | 6TQM | 10555 | 2023-07-17 | 2019-12-16 | 3.8 | 4.34 | 3.78 | 20.0 | 0.014 | 0.98 | 0.0 | 0.12 | 15.01 | 0.01 | 2.083 | 4.06 | 1.40 | 14.5 | 85.5 | 0.0 | -5.95 | 0.30 | 0.07 | 0.30 | 3.9 | 0.003 | 0.78 | 0.0 | 0.04 | 15.99 | 0.00 | 1.902 | 16.86 | 0.14 | 11.1 | 88.9 | 0.0 | -3.64 | 1.33 | 0.39 | 0.26 | 0.42 | 39616 | 2578 | 6 | 0 | 4 | 0 | 19804 | logfile |
✔ | 7MDX | 23783 | 2023-07-05 | 2021-04-06 | 3.8 | 4.16 | — | 4.1 | 0.004 | 0.70 | 1.0 | 0.05 | 15.48 | 0.01 | 2.228 | 10.45 | 0.10 | 8.4 | 91.6 | 0.0 | -1.27 | 0.39 | 0.72 | 0.93 | 4.1 | 0.003 | 0.78 | 0.0 | 0.05 | 17.54 | 0.00 | 2.075 | 13.98 | 0.59 | 9.2 | 90.8 | 0.1 | -1.35 | 0.51 | 0.39 | 0.72 | 0.68 | 9513 | 1234 | 5 | 0 | 4 | 0 | 0 | logfile |
✔ | 8FD5 | 29002 | 2023-07-03 | 2022-12-02 | 4.57 | 4.19 | — | 10.0 | 0.016 | 2.15 | 4.0 | 0.13 | 13.14 | 0.02 | 2.541 | 0.16 | 0.29 | 3.8 | 96.2 | 0.0 | -1.38 | 0.28 | 0.02 | — | 3.5 | 0.004 | 0.81 | 0.0 | 0.04 | 13.27 | 0.01 | 2.112 | 15.37 | 0.00 | 6.2 | 93.8 | 0.0 | -1.75 | 1.59 | 0.40 | 0.17 | — | 3214 | 419 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 8BC1 | 15959 | 2023-07-04 | 2022-10-14 | 2.93 | 3.48 | 2.73 | 3.5 | 0.002 | 0.46 | 0.0 | 0.04 | 10.38 | 0.00 | 2.265 | 7.96 | 3.43 | 2.9 | 97.1 | 0.0 | 1.53 | 0.38 | 0.52 | 1.52 | 3.5 | 0.004 | 0.81 | 0.0 | 0.04 | 15.72 | 0.01 | 2.131 | 15.98 | 2.25 | 4.8 | 95.2 | 0.0 | 0.67 | 1.04 | 0.40 | 0.54 | 1.03 | 8684 | 1054 | 4 | 0 | 6 | 0 | 0 | logfile |
✔ | 6S6L | 10103 | 2023-07-06 | 2019-07-03 | 3.1 | 2.99 | 2.95 | 2.9 | 0.014 | 1.12 | 0.0 | 0.07 | 9.31 | 0.01 | 2.263 | 5.39 | 0.16 | 5.3 | 94.7 | 0.0 | -2.85 | 0.39 | 0.65 | 3.67 | 2.9 | 0.002 | 0.59 | 0.0 | 0.04 | 12.12 | 0.01 | 2.158 | 8.90 | 0.24 | 3.5 | 96.5 | 0.0 | -0.82 | 0.55 | 0.40 | 0.66 | 2.99 | 11587 | 1510 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 6B3R | 7042 | 2023-07-16 | 2017-09-22 | 3.8 | 3.79 | — | 3.8 | 0.006 | 1.04 | 0.0 | 0.06 | 10.17 | 0.01 | 2.247 | 4.85 | 0.25 | 8.1 | 91.9 | 0.0 | -4.41 | 0.35 | 0.53 | 1.24 | 3.8 | 0.003 | 0.75 | 0.0 | 0.04 | 15.50 | 0.00 | 2.107 | 12.12 | 0.28 | 6.7 | 93.3 | 0.0 | -0.06 | 1.03 | 0.40 | 0.55 | 1.40 | 35718 | 4506 | 6 | 0 | 48 | 0 | 0 | logfile |
✔ | 8JJ5 | 36340 | 2023-07-07 | 2023-05-29 | 3.5 | 3.74 | 3.51 | 3.7 | 0.021 | 2.18 | 39.0 | 0.19 | 15.54 | 0.02 | 2.397 | 1.75 | 1.22 | 8.9 | 91.0 | 0.1 | -2.93 | 0.38 | 0.61 | 1.08 | 3.7 | 0.003 | 0.71 | 0.0 | 0.04 | 16.25 | 0.00 | 2.080 | 16.29 | 0.41 | 6.1 | 93.9 | 0.0 | -0.01 | 1.07 | 0.40 | 0.64 | 0.81 | 13594 | 866 | 10 | 0 | 14 | 0 | 6679 | logfile |
✔ | 7JYi | 22526 | 2023-07-04 | 2020-08-30 | 3.4 | 3.52 | — | 3.5 | 0.008 | 0.75 | 0.0 | 0.05 | 16.05 | 0.00 | 2.104 | 14.16 | 5.45 | 10.3 | 89.2 | 0.5 | -4.54 | 0.43 | 0.84 | 2.04 | 3.5 | 0.004 | 0.69 | 0.0 | 0.04 | 16.64 | 0.00 | 2.112 | 8.81 | 0.42 | 8.4 | 91.4 | 0.2 | -1.77 | 0.66 | 0.40 | 0.85 | 2.23 | 8807 | 1152 | 4 | 0 | 0 | 0 | 0 | logfile |
✔ | 8HiZ | 34830 | 2023-07-03 | 2022-11-22 | 3.08 | 3.26 | 2.97 | 3.2 | 0.004 | 0.70 | 0.0 | 0.04 | 15.48 | 0.00 | 2.324 | 14.33 | 0.30 | 2.9 | 97.1 | 0.0 | 1.51 | 0.40 | 0.77 | 2.44 | 3.2 | 0.003 | 0.62 | 0.0 | 0.04 | 16.36 | 0.00 | 2.104 | 13.25 | 0.30 | 3.9 | 96.1 | 0.0 | 0.78 | 1.04 | 0.40 | 0.80 | 1.85 | 3274 | 416 | 1 | 0 | 1 | 0 | 0 | logfile |