The table shows a selection of parameters. Activate more columns using
the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 8QCP | 18331 | 2023-12-08 | 2023-08-28 | 3.21 | 3.22 | 3.18 | 3.3 | 0.011 | 1.86 | 1.0 | 0.09 | 11.52 | 0.01 | 2.543 | 0.00 | 0.00 | 7.5 | 92.5 | 0.0 | -2.03 | 0.31 | 0.78 | 5.53 | 3.3 | 0.004 | 0.62 | 0.0 | 0.05 | 16.11 | 0.00 | 2.194 | 2.43 | 0.00 | 4.1 | 95.9 | 0.0 | -2.16 | 2.98 | 0.34 | 0.86 | 5.67 | 7002 | 453 | 6 | 0 | 0 | 0 | 3567 | logfile |
✔ | 8Q27 | 18070 | 2023-12-08 | 2023-08-01 | 2.02 | 1.98 | 1.92 | 2.0 | 0.011 | 1.74 | 0.0 | 0.08 | 11.92 | 0.01 | 2.517 | 0.00 | 1.27 | 2.3 | 97.7 | 0.0 | -1.63 | 0.21 | 0.69 | 8.02 | 2.0 | 0.002 | 0.56 | 0.0 | 0.05 | 17.05 | 0.00 | 2.209 | 1.86 | 0.00 | 2.9 | 97.1 | 0.0 | -1.35 | 1.20 | 0.34 | 0.88 | 7.27 | 7002 | 453 | 6 | 0 | 0 | 0 | 3567 | logfile |
✔ | 7NCK | 12269 | 2023-12-07 | 2021-01-28 | 3.18 | 3.22 | 2.86 | 3.4 | 0.011 | 2.19 | 6.0 | 0.10 | 11.66 | 0.01 | 2.583 | 0.37 | 3.33 | 4.0 | 96.0 | 0.0 | -2.54 | 0.39 | 0.71 | 4.89 | 3.4 | 0.003 | 0.59 | 0.0 | 0.05 | 16.13 | 0.00 | 2.129 | 8.11 | 0.00 | 4.0 | 96.0 | 0.0 | -2.29 | 0.90 | 0.34 | 0.71 | 2.57 | 5430 | 384 | 6 | 0 | 0 | 0 | 2778 | logfile |
✔ | 7YNG | 33961 | 2023-12-07 | 2022-07-30 | 3.1 | 3.08 | 2.33 | 3.4 | 0.009 | 0.85 | 0.0 | 0.06 | 13.71 | 0.00 | 2.192 | 9.66 | 0.00 | 10.4 | 89.6 | 0.0 | -4.25 | 0.36 | 0.76 | 3.68 | 3.4 | 0.002 | 0.51 | 0.0 | 0.05 | 14.89 | 0.00 | 2.286 | 6.32 | 0.00 | 4.9 | 95.1 | 0.0 | -1.98 | 0.36 | 0.34 | 0.74 | 3.39 | 2628 | 378 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 7Q3U | 13795 | 2023-12-07 | 2021-10-28 | 3.7 | 3.43 | 3.48 | 4.1 | 0.005 | 1.17 | 0.0 | 0.05 | 16.84 | 0.01 | 2.120 | 36.48 | 0.00 | 10.7 | 89.3 | 0.0 | -5.79 | 0.23 | 0.47 | 0.88 | 4.0 | 0.004 | 0.92 | 0.0 | 0.04 | 18.42 | 0.01 | 2.192 | 28.03 | 0.00 | 14.8 | 85.2 | 0.0 | -6.03 | 2.22 | 0.34 | 0.60 | 2.69 | 2355 | 355 | 5 | 0 | 0 | 0 | 0 | logfile |
✔ | 7ELL | 31184 | 2023-12-08 | 2021-04-12 | 3.8 | 4.24 | — | 3.8 | 0.006 | 0.86 | 1.0 | 0.05 | 14.83 | 0.01 | 1.176 | 17.74 | 0.62 | 8.9 | 90.9 | 0.2 | -2.13 | 0.35 | 0.86 | 1.77 | 3.8 | 0.005 | 0.77 | 0.0 | 0.05 | 15.99 | 0.00 | 2.030 | 12.91 | 0.40 | 4.8 | 95.1 | 0.1 | -0.02 | 1.31 | 0.34 | 0.88 | 1.94 | 60584 | 7917 | 31 | 0 | 10 | 0 | 0 | logfile |
✔ | 6M7D | 30129 | 2023-12-07 | 2020-03-18 | 2.9 | 2.82 | — | 2.8 | 0.010 | 1.03 | 0.0 | 0.07 | 13.84 | 0.00 | 2.157 | 15.48 | 0.58 | 2.4 | 97.6 | 0.0 | -0.46 | 0.35 | 0.86 | 4.08 | 2.8 | 0.002 | 0.51 | 0.0 | 0.04 | 15.72 | 0.00 | 2.232 | 8.89 | 1.46 | 1.5 | 98.5 | 0.0 | 2.16 | 0.85 | 0.34 | 0.88 | 3.05 | 3280 | 412 | 2 | 6 | 0 | 0 | 0 | logfile |
✔ | 7T4F | 25675 | 2023-12-08 | 2021-12-09 | 2.7 | 3.13 | 2.69 | 3.1 | 0.004 | 0.70 | 0.0 | 0.05 | 14.61 | 0.00 | 2.228 | 4.75 | 2.44 | 0.3 | 99.7 | 0.0 | 0.54 | 0.33 | 0.71 | 4.04 | 3.1 | 0.003 | 0.52 | 0.0 | 0.05 | 15.29 | 0.00 | 2.217 | 4.40 | 1.41 | 0.6 | 99.4 | 0.0 | 0.30 | 0.37 | 0.34 | 0.80 | 4.44 | 7224 | 980 | 4 | 0 | 0 | 0 | 0 | logfile |
✔ | 7YNP | 33968 | 2023-12-07 | 2022-07-31 | 2.8 | 2.38 | 2.15 | 3.4 | 0.012 | 0.97 | 0.0 | 0.06 | 13.69 | 0.00 | 2.265 | 10.48 | 0.00 | 6.5 | 93.5 | 0.0 | -3.88 | 0.39 | 0.78 | 4.28 | 3.5 | 0.005 | 0.54 | 0.0 | 0.05 | 14.75 | 0.00 | 2.231 | 7.81 | 2.71 | 5.4 | 94.6 | 0.0 | -2.18 | 1.78 | 0.34 | 0.80 | 4.85 | 2568 | 366 | 8 | 0 | 2 | 0 | 0 | logfile |
✔ | 7QKZ | 14058 | 2023-12-07 | 2021-12-19 | 2.65 | 2.79 | 2.28 | 3.2 | 0.013 | 2.86 | 9.0 | 0.34 | 18.75 | 0.02 | 2.498 | 0.59 | 0.00 | 9.9 | 90.1 | 0.0 | -1.61 | 0.34 | 0.61 | 7.02 | 3.3 | 0.006 | 1.51 | 0.0 | 0.38 | 18.97 | 0.01 | 2.249 | 14.18 | 0.00 | 1.2 | 98.8 | 0.0 | -0.83 | 5.07 | 0.34 | 0.64 | 6.93 | 1701 | 99 | 9 | 0 | 0 | 0 | 891 | logfile |
✔ | 6YBV | 10774 | 2023-12-08 | 2020-03-17 | 3.8 | 3.86 | 4.60 | 3.6 | 0.008 | 1.47 | 0.0 | 0.07 | 21.02 | 0.01 | 2.202 | 9.58 | 6.67 | 6.1 | 93.4 | 0.5 | -2.26 | 0.34 | 0.56 | 1.26 | 3.6 | 0.004 | 0.83 | 0.0 | 0.05 | 21.43 | 0.00 | 2.040 | 18.73 | 1.33 | 9.8 | 90.1 | 0.1 | -2.55 | 3.36 | 0.34 | 0.59 | 0.93 | 6731 | 769 | 5 | 78 | 0 | 0 | 0 | logfile |
✔ | 7oZG | 13123 | 2023-12-07 | 2021-06-28 | 3.3 | 3.21 | 2.71 | 3.6 | 0.023 | 1.83 | 0.0 | 0.10 | 12.75 | 0.01 | 2.254 | 17.09 | 0.00 | 8.7 | 91.3 | 0.0 | -4.01 | 0.40 | 0.73 | 3.72 | 3.7 | 0.006 | 0.83 | 0.0 | 0.05 | 15.17 | 0.00 | 2.314 | 18.76 | 0.61 | 15.2 | 84.8 | 0.0 | -4.68 | 3.41 | 0.35 | 0.68 | 5.07 | 4960 | 730 | 10 | 0 | 0 | 0 | 0 | logfile |
✔ | 6ZMS | 11300 | 2023-12-09 | 2020-07-03 | 3.4 | 3.78 | — | 3.8 | 0.019 | 1.98 | 3.0 | 0.10 | 14.13 | 0.01 | 2.427 | 0.32 | 2.12 | 5.6 | 91.4 | 3.0 | -2.88 | 0.40 | 0.72 | 1.84 | 3.7 | 0.021 | 1.11 | 0.0 | 0.04 | 15.72 | 0.01 | 2.022 | 6.13 | 0.28 | 6.6 | 93.1 | 0.4 | -1.93 | 1.76 | 0.35 | 0.84 | 3.37 | 12570 | 818 | 4 | 0 | 0 | 0 | 6173 | logfile |
✔ | 7QJY | 14026 | 2023-12-07 | 2021-12-17 | 3.14 | 2.93 | 3.08 | 3.1 | 0.011 | 1.87 | 0.0 | 0.09 | 12.32 | 0.01 | 2.519 | 0.00 | 0.25 | 5.7 | 94.3 | 0.0 | -2.50 | 0.38 | 0.82 | 5.27 | 3.1 | 0.007 | 0.81 | 0.0 | 0.05 | 17.02 | 0.00 | 2.151 | 8.68 | 0.76 | 2.3 | 97.7 | 0.0 | -2.24 | 3.43 | 0.35 | 0.83 | 4.41 | 3444 | 450 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 8Q8Y | 18265 | 2023-12-08 | 2023-08-19 | 2.88 | 2.50 | 2.59 | 2.7 | 0.011 | 1.89 | 4.0 | 0.11 | 12.93 | 0.01 | 2.516 | 0.00 | 0.00 | 2.3 | 97.7 | 0.0 | -1.68 | 0.26 | 0.75 | 5.62 | 2.7 | 0.003 | 0.57 | 0.0 | 0.05 | 17.84 | 0.00 | 1.871 | 2.90 | 1.55 | 1.6 | 98.4 | 0.0 | -1.48 | 1.35 | 0.35 | 0.88 | 5.15 | 6896 | 441 | 6 | 0 | 0 | 0 | 3521 | logfile |
✔ | 7U12 | 26275 | 2023-12-07 | 2022-02-19 | 3.5 | 3.59 | — | 4.4 | 0.011 | 1.06 | 0.0 | 0.07 | 16.72 | 0.01 | 2.160 | 20.06 | 5.51 | 8.0 | 92.0 | 0.0 | -3.00 | 0.29 | 0.45 | 2.77 | 4.2 | 0.005 | 0.90 | 0.0 | 0.06 | 15.26 | 0.00 | 2.146 | 15.68 | 1.57 | 12.5 | 87.5 | 0.0 | -4.02 | 2.21 | 0.35 | 0.58 | 2.49 | 3456 | 405 | 6 | 0 | 12 | 0 | 0 | logfile |
✔ | 7UN5 | 26613 | 2023-12-07 | 2022-04-08 | 3.13 | 3.63 | 3.08 | 3.6 | 0.004 | 0.72 | 0.0 | 0.04 | 14.46 | 0.00 | 2.387 | 11.64 | 0.51 | 7.0 | 93.0 | 0.0 | -3.83 | 0.40 | 0.80 | 4.50 | 3.6 | 0.005 | 0.77 | 0.0 | 0.04 | 15.18 | 0.00 | 2.237 | 10.71 | 0.77 | 8.5 | 91.5 | 0.0 | -3.92 | 0.47 | 0.35 | 0.74 | 4.54 | 4380 | 620 | 10 | 0 | 0 | 0 | 0 | logfile |
✔ | 8Q8E | 18252 | 2023-12-08 | 2023-08-18 | 3.81 | 3.69 | 3.74 | 3.9 | 0.012 | 2.01 | 6.0 | 0.11 | 11.64 | 0.01 | 1.524 | 5.19 | 0.00 | 9.0 | 91.0 | 0.0 | -2.95 | 0.28 | 0.52 | 2.07 | 3.8 | 0.005 | 0.91 | 0.0 | 0.05 | 14.89 | 0.01 | 2.115 | 14.19 | 0.77 | 11.0 | 89.0 | 0.0 | -3.54 | 1.74 | 0.35 | 0.79 | 2.98 | 6810 | 894 | 12 | 0 | 0 | 0 | 0 | logfile |
✔ | 7U16 | 26279 | 2023-12-07 | 2022-02-19 | 2.7 | 3.30 | — | 3.5 | 0.004 | 0.62 | 0.0 | 0.06 | 16.84 | 0.00 | 2.310 | 8.58 | 0.00 | 6.8 | 93.2 | 0.0 | -2.67 | 0.29 | 0.68 | 2.62 | 3.5 | 0.003 | 0.61 | 0.0 | 0.05 | 14.54 | 0.00 | 2.313 | 6.98 | 1.05 | 6.0 | 94.0 | 0.0 | -2.51 | 2.05 | 0.35 | 0.79 | 4.99 | 3456 | 405 | 6 | 0 | 12 | 0 | 0 | logfile |
✔ | 8Q9G | 18280 | 2023-12-08 | 2023-08-20 | 2.65 | 1.99 | 2.52 | 2.2 | 0.011 | 1.95 | 0.0 | 0.09 | 10.25 | 0.01 | 2.554 | 0.00 | 0.00 | 1.6 | 98.4 | 0.0 | -1.98 | 0.25 | 0.66 | 6.26 | 2.2 | 0.004 | 0.60 | 0.0 | 0.05 | 17.40 | 0.00 | 2.078 | 2.35 | 0.78 | 2.3 | 97.7 | 0.0 | -2.05 | 1.39 | 0.35 | 0.84 | 6.41 | 6822 | 438 | 6 | 0 | 0 | 0 | 3480 | logfile |