The table shows a selection of parameters. Activate more columns using
the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 5GAF | 8002 | 2022-12-17 | 2015-11-25 | 4.3 | 4.42 | — | 4.3 | 0.007 | 1.09 | 1.0 | 0.05 | 15.95 | 0.01 | 1.266 | 8.96 | 11.04 | 3.5 | 96.4 | 0.1 | -3.28 | 0.63 | 0.64 | — | 4.3 | 0.004 | 0.65 | 0.0 | 0.03 | 14.91 | 0.00 | 1.080 | 19.19 | 0.00 | 4.6 | 95.3 | 0.1 | -0.98 | 1.99 | 0.71 | 0.84 | — | 96182 | 3889 | 47 | 3049 | 452 | 0 | 0 | logfile |
✔ | 6YBW | 10775 | 2022-12-22 | 2020-03-18 | 3.1 | 3.30 | 2.98 | 3.2 | 0.008 | 1.03 | 0.0 | 0.05 | 16.82 | 0.02 | 2.097 | 4.24 | 3.04 | 3.7 | 96.3 | 0.0 | -2.06 | 0.74 | 0.87 | 3.02 | 3.2 | 0.003 | 0.64 | 0.0 | 0.03 | 16.68 | 0.01 | 1.944 | 8.52 | 0.44 | 2.8 | 97.2 | 0.0 | 0.02 | 1.13 | 0.74 | 0.88 | 2.95 | 52840 | 3374 | 30 | 1248 | 61 | 0 | 0 | logfile |
✔ | 6S61 | 10101 | 2022-12-14 | 2019-07-02 | 1.84 | 1.89 | 1.85 | 1.9 | 0.011 | 1.36 | 0.0 | 0.06 | 12.21 | 0.01 | 0.312 | 2.62 | 1.29 | 1.8 | 98.2 | 0.0 | 3.69 | 0.77 | 0.86 | 8.46 | 1.9 | 0.003 | 0.57 | 0.0 | 0.03 | 14.82 | 0.00 | 1.798 | 5.19 | 0.65 | 1.8 | 98.2 | 0.0 | 4.54 | 0.74 | 0.80 | 0.90 | 8.65 | 71060 | 4128 | 72 | 0 | 30 | 3854 | 32904 | logfile |
✔ | 6RJU | 4906 | 2022-12-11 | 2019-04-29 | 3.2 | 4.49 | 2.14 | 10.0 | 0.007 | 0.93 | 0.0 | 0.05 | 15.36 | 0.00 | 2.423 | 4.52 | 0.00 | 11.6 | 88.4 | 0.0 | -7.10 | 0.22 | -0.01 | -0.80 | 10.0 | 0.003 | 0.66 | 0.0 | 0.03 | 16.23 | 0.00 | 2.422 | 6.03 | 0.00 | 3.9 | 96.1 | 0.0 | -0.32 | 1.40 | 0.27 | 0.03 | -0.67 | 1992 | 131 | 1 | 0 | 0 | 0 | 997 | logfile |
✔ | 6WCB | 21605 | 2022-12-12 | 2020-03-30 | 3.17 | 3.17 | — | 3.2 | 0.005 | 0.41 | 0.0 | 0.03 | 13.87 | 0.00 | 2.128 | 2.50 | 1.29 | 0.8 | 99.2 | 0.0 | 0.58 | 0.55 | 0.77 | 2.89 | 3.2 | 0.002 | 0.48 | 0.0 | 0.03 | 15.53 | 0.00 | 2.084 | 3.96 | 0.16 | 1.5 | 98.5 | 0.0 | 3.59 | 1.29 | 0.54 | 0.79 | 2.38 | 11647 | 734 | 6 | 0 | 7 | 40 | 5904 | logfile |
✔ | 6WU3 | 21904 | 2022-12-13 | 2020-05-04 | 3.16 | 3.62 | 3.40 | 3.5 | 0.008 | 0.60 | 0.0 | 0.04 | 15.89 | 0.00 | 2.057 | 9.10 | 6.27 | 8.4 | 91.6 | 0.0 | -3.62 | 0.61 | 0.85 | 2.96 | 3.6 | 0.003 | 0.57 | 0.0 | 0.03 | 15.80 | 0.00 | 2.033 | 8.73 | 0.57 | 5.4 | 94.6 | 0.0 | 1.08 | 1.85 | 0.59 | 0.87 | 2.70 | 13610 | 890 | 2 | 0 | 0 | 0 | 6936 | logfile |
✔ | 6MEC | 9106 | 2022-12-14 | 2018-09-06 | 3.6 | 3.69 | — | 3.6 | 0.010 | 1.21 | 0.0 | 0.06 | 18.24 | 0.01 | 1.659 | 15.45 | 0.00 | 13.7 | 86.3 | 0.0 | -4.93 | 0.86 | 0.80 | 2.53 | 3.6 | 0.004 | 0.65 | 0.0 | 0.03 | 18.06 | 0.00 | 1.839 | 16.96 | 0.28 | 9.1 | 90.9 | 0.0 | -1.86 | 0.92 | 0.86 | 0.80 | 1.95 | 21276 | 414 | 5 | 832 | 52 | 0 | 0 | logfile |
✔ | 6PC6 | 20297 | 2022-12-14 | 2019-06-16 | 2.5 | 3.08 | — | 2.9 | 0.008 | 0.50 | 0.0 | 0.03 | 12.75 | 0.02 | 1.930 | 2.96 | 2.11 | 6.3 | 93.7 | 0.0 | -3.58 | 0.73 | 0.88 | 4.50 | 2.9 | 0.004 | 0.63 | 0.0 | 0.03 | 14.58 | 0.01 | 1.976 | 7.98 | 3.42 | 6.7 | 93.1 | 0.2 | -0.78 | 0.91 | 0.74 | 0.90 | 4.21 | 72127 | 963 | 8 | 3015 | 1 | 0 | 0 | logfile |
✔ | 7CRo | 30453 | 2022-12-15 | 2020-08-14 | 3.75 | 3.86 | — | 3.8 | 0.006 | 0.74 | 1.0 | 0.04 | 27.64 | 0.00 | 1.421 | 10.71 | 1.45 | 8.7 | 91.3 | 0.0 | -5.38 | 0.78 | 0.83 | 2.26 | 3.8 | 0.004 | 0.58 | 0.0 | 0.03 | 28.01 | 0.00 | 2.197 | 6.89 | 0.48 | 5.9 | 94.1 | 0.0 | -2.62 | 0.49 | 0.79 | 0.84 | 1.24 | 14797 | 999 | 11 | 336 | 4 | 0 | 0 | logfile |
✔ | 7CRR | 30457 | 2022-12-15 | 2020-08-14 | 3.48 | 3.61 | — | 3.5 | 0.007 | 0.75 | 0.0 | 0.04 | 27.67 | 0.00 | 2.037 | 12.56 | 1.56 | 10.2 | 89.8 | 0.0 | -5.14 | 0.74 | 0.82 | 2.82 | 3.5 | 0.004 | 0.58 | 0.0 | 0.03 | 27.91 | 0.00 | 2.210 | 8.57 | 0.36 | 6.4 | 93.6 | 0.0 | -1.62 | 0.42 | 0.78 | 0.87 | 2.41 | 14839 | 1002 | 11 | 336 | 4 | 0 | 0 | logfile |
✔ | 6K3o | 9910 | 2022-12-16 | 2019-05-21 | 3.4 | 3.86 | — | 3.8 | 0.003 | 0.56 | 0.0 | 0.03 | 14.46 | 0.00 | 1.077 | 16.09 | 0.00 | 3.8 | 96.2 | 0.0 | -1.52 | 0.79 | 0.82 | 3.15 | 3.8 | 0.004 | 0.73 | 0.0 | 0.03 | 17.05 | 0.00 | 1.627 | 5.96 | 0.75 | 2.1 | 97.9 | 0.0 | 3.83 | 0.50 | 0.76 | 0.81 | 2.46 | 31508 | 3790 | 48 | 0 | 36 | 0 | 0 | logfile |
✔ | 7K63 | 22687 | 2022-12-14 | 2020-09-18 | 3.03 | 3.30 | — | 3.2 | 0.004 | 0.62 | 0.0 | 0.04 | 26.88 | 0.00 | 2.158 | 7.07 | 0.09 | 2.0 | 98.0 | 0.0 | 0.98 | 0.76 | 0.80 | 3.33 | 3.2 | 0.003 | 0.58 | 0.0 | 0.03 | 27.53 | 0.00 | 2.214 | 8.18 | 0.00 | 2.9 | 97.1 | 0.0 | 1.66 | 0.39 | 0.78 | 0.84 | 2.71 | 18330 | 1298 | 13 | 394 | 0 | 0 | 0 | logfile |
✔ | 6G4W | 4349 | 2022-12-21 | 2018-03-28 | 4.5 | 5.22 | — | 4.4 | 0.006 | 1.11 | 2.0 | 0.07 | 21.52 | 0.01 | 0.760 | 5.05 | 0.00 | 8.2 | 91.5 | 0.3 | -3.51 | 0.65 | 0.51 | — | 4.3 | 0.004 | 0.70 | 0.0 | 0.03 | 23.60 | 0.00 | 2.004 | 11.37 | 0.00 | 9.6 | 90.3 | 0.1 | -1.00 | 2.53 | 0.87 | 0.62 | — | 45223 | 4589 | 31 | 1563 | 768 | 0 | 0 | logfile |
✔ | 7KDT | 22829 | 2022-12-11 | 2020-10-09 | 3.05 | 3.34 | 3.19 | 3.4 | 0.012 | 1.74 | 0.0 | 0.09 | 14.56 | 0.02 | 2.562 | 0.12 | 0.47 | 1.4 | 98.6 | 0.0 | -1.64 | 0.70 | 0.77 | 2.95 | 3.3 | 0.004 | 0.55 | 0.0 | 0.03 | 16.91 | 0.00 | 2.224 | 6.33 | 0.23 | 1.8 | 98.2 | 0.0 | 2.64 | 2.11 | 0.68 | 0.80 | 2.66 | 8064 | 505 | 2 | 0 | 0 | 0 | 4042 | logfile |
✔ | 6MHo | 9115 | 2022-12-16 | 2018-09-18 | 3.4 | 3.50 | 3.44 | 3.5 | 0.005 | 0.72 | 0.0 | 0.04 | 7.36 | 0.00 | 2.108 | 2.96 | 0.00 | 2.7 | 97.3 | 0.0 | -2.41 | 0.66 | 0.76 | 3.45 | 3.5 | 0.003 | 0.54 | 0.0 | 0.03 | 12.72 | 0.00 | 1.989 | 6.10 | 0.21 | 4.2 | 95.8 | 0.0 | 1.20 | 2.46 | 0.68 | 0.81 | 3.70 | 32224 | 2404 | 4 | 0 | 0 | 0 | 15184 | logfile |
✔ | 6NY3 | 8980 | 2022-12-12 | 2019-02-10 | 3.7 | 4.08 | — | 4.0 | 0.009 | 1.13 | 0.0 | 0.06 | 19.98 | 0.01 | 2.251 | 4.71 | 0.33 | 16.9 | 82.5 | 0.6 | -5.84 | 0.76 | 0.84 | 1.41 | 4.0 | 0.003 | 0.65 | 0.0 | 0.03 | 19.87 | 0.00 | 2.191 | 9.46 | 0.49 | 15.1 | 84.8 | 0.1 | -1.79 | 1.01 | 0.66 | 0.77 | 0.74 | 10214 | 794 | 4 | 164 | 121 | 0 | 0 | logfile |
✔ | 7KTQ | 23026 | 2022-12-12 | 2020-11-24 | 3.3 | 3.36 | — | 3.3 | 0.008 | 0.84 | 0.0 | 0.05 | 29.36 | 0.01 | 2.201 | 6.42 | 0.16 | 1.5 | 98.5 | 0.0 | -2.43 | 0.77 | 0.85 | 3.63 | 3.3 | 0.004 | 0.56 | 0.0 | 0.03 | 29.41 | 0.00 | 2.137 | 6.29 | 0.16 | 2.3 | 97.7 | 0.0 | 2.92 | 3.06 | 0.79 | 0.88 | 2.56 | 12745 | 752 | 10 | 331 | 0 | 0 | 0 | logfile |
✔ | 6W7N | 21572 | 2022-12-21 | 2020-03-19 | 3.4 | 3.72 | — | 3.6 | 0.002 | 0.46 | 0.0 | 0.03 | 14.05 | 0.00 | 1.907 | 8.15 | 0.08 | 8.2 | 91.5 | 0.3 | -4.03 | 0.78 | 0.78 | 1.44 | 3.6 | 0.005 | 0.64 | 0.0 | 0.03 | 15.40 | 0.00 | 2.136 | 11.29 | 0.69 | 11.6 | 88.1 | 0.3 | -2.05 | 1.23 | 0.81 | 0.83 | 1.49 | 42287 | 1660 | 15 | 1372 | 0 | 0 | 0 | logfile |
✔ | 6o1D | 0586 | 2022-12-12 | 2019-02-19 | 3.395 | 3.57 | — | 3.5 | 0.010 | 0.95 | 1.0 | 0.05 | 28.08 | 0.01 | 2.317 | 2.17 | 0.00 | 3.4 | 96.6 | 0.0 | -4.72 | 0.79 | 0.87 | 4.13 | 3.5 | 0.003 | 0.57 | 0.0 | 0.03 | 27.95 | 0.00 | 2.197 | 7.77 | 0.00 | 2.0 | 98.0 | 0.0 | 0.55 | 0.54 | 0.79 | 0.88 | 2.70 | 11982 | 761 | 10 | 290 | 0 | 0 | 0 | logfile |
✔ | 6oT2 | 20192 | 2022-12-16 | 2019-05-02 | 4.1 | 4.25 | 4.02 | 4.1 | 0.009 | 0.87 | 0.0 | 0.05 | 8.41 | 0.01 | 2.066 | 6.19 | 0.00 | 7.3 | 92.7 | 0.0 | -2.26 | 0.71 | 0.76 | — | 4.1 | 0.002 | 0.52 | 0.0 | 0.03 | 10.42 | 0.00 | 2.135 | 7.27 | 0.00 | 5.1 | 94.9 | 0.0 | 1.85 | 1.72 | 0.71 | 0.76 | — | 32311 | 2444 | 4 | 0 | 56 | 0 | 14975 | logfile |