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Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 7PGQ | 13392 | 2024-03-21 | 2021-08-15 | 3.5 | 3.89 | 3.50 | 3.6 | 0.003 | 0.45 | 0.0 | 0.03 | 10.68 | 0.00 | 1.905 | 3.80 | 0.91 | 1.2 | 98.8 | 0.0 | -0.24 | 0.81 | 0.79 | 1.38 | 3.6 | 0.003 | 0.52 | 0.0 | 0.03 | 12.89 | 0.00 | 2.006 | 5.48 | 1.42 | 3.6 | 96.3 | 0.1 | 1.09 | 0.71 | 0.81 | 0.79 | 1.34 | 31508 | 1970 | 3 | 0 | 2 | 0 | 15807 | logfile |
✔ | 7oHC | 12900 | 2024-03-15 | 2021-05-10 | 2.5 | 3.15 | — | 2.9 | 0.005 | 0.86 | 0.0 | 0.05 | 29.62 | 0.01 | 2.193 | 4.51 | 0.16 | 1.9 | 98.1 | 0.0 | 0.04 | 0.84 | 0.82 | 3.50 | 2.9 | 0.004 | 0.60 | 0.0 | 0.03 | 28.85 | 0.00 | 2.132 | 8.36 | 2.51 | 2.1 | 97.9 | 0.0 | 2.66 | 1.12 | 0.86 | 0.86 | 3.13 | 12019 | 764 | 10 | 290 | 0 | 0 | 0 | logfile |
✔ | 7LV9 | 23530 | 2024-03-11 | 2021-02-24 | 4.5 | 7.82 | 4.59 | 4.4 | 0.003 | 0.64 | 0.0 | 0.04 | 27.07 | 0.00 | 1.334 | 3.02 | 0.00 | 3.2 | 96.8 | 0.0 | -3.35 | 0.82 | 0.66 | — | 4.4 | 0.003 | 0.63 | 0.0 | 0.03 | 28.57 | 0.00 | 2.194 | 16.76 | 0.00 | 2.5 | 97.5 | 0.0 | 1.84 | 1.51 | 0.90 | 0.84 | — | 8238 | 581 | 8 | 190 | 0 | 0 | 0 | logfile |
✔ | 6X0U | 21984 | 2024-03-10 | 2020-05-17 | 3.6 | 3.62 | — | 3.6 | 0.004 | 0.62 | 0.0 | 0.04 | 14.50 | 0.00 | 2.277 | 5.74 | 0.00 | 3.7 | 96.1 | 0.3 | -5.79 | 0.26 | 0.78 | 1.89 | 3.6 | 0.002 | 0.66 | 0.0 | 0.03 | 17.85 | 0.00 | 2.198 | 6.54 | 2.34 | 3.2 | 96.8 | 0.0 | 1.40 | 0.77 | 0.27 | 0.78 | 2.51 | 3091 | 398 | 4 | 0 | 0 | 0 | 0 | logfile |
✔ | 7XQB | 33392 | 2024-03-25 | 2022-05-07 | 3.0 | 3.07 | 2.98 | 3.1 | 0.006 | 1.12 | 0.0 | 0.04 | 18.74 | 0.00 | 2.280 | 2.77 | 1.10 | 2.0 | 98.0 | 0.0 | 2.22 | 0.66 | 0.87 | 3.09 | 3.1 | 0.003 | 0.59 | 0.0 | 0.03 | 16.03 | 0.00 | 2.173 | 7.03 | 1.01 | 4.1 | 95.9 | 0.0 | 2.23 | 0.84 | 0.65 | 0.88 | 3.01 | 42852 | 2424 | 24 | 0 | 168 | 0 | 20040 | logfile |
✔ | 6T90 | 10406 | 2024-03-15 | 2019-10-25 | 3.05 | 3.74 | — | 3.3 | 0.022 | 1.52 | 0.0 | 0.09 | 24.66 | 0.01 | 2.459 | 0.40 | 0.00 | 0.3 | 99.7 | 0.0 | 1.02 | 0.84 | 0.81 | 4.34 | 3.3 | 0.004 | 0.62 | 0.0 | 0.03 | 26.38 | 0.00 | 2.116 | 6.65 | 1.59 | 1.2 | 98.8 | 0.0 | 2.67 | 2.80 | 0.86 | 0.87 | 2.61 | 13031 | 903 | 19 | 282 | 9 | 0 | 0 | logfile |
✔ | 8ET7 | 28587 | 2024-03-11 | 2022-10-16 | 3.77 | 4.05 | 3.85 | 4.0 | 0.003 | 0.49 | 0.0 | 0.03 | 11.06 | 0.00 | 2.342 | 3.90 | 0.24 | 3.2 | 96.8 | 0.0 | 1.90 | 0.49 | 0.70 | 1.68 | 4.0 | 0.003 | 0.55 | 0.0 | 0.03 | 15.34 | 0.00 | 1.918 | 7.31 | 3.54 | 5.8 | 94.2 | 0.0 | 1.58 | 1.49 | 0.50 | 0.72 | 1.42 | 8111 | 532 | 3 | 0 | 3 | 0 | 4007 | logfile |
✔ | 7CRo | 30453 | 2024-03-20 | 2020-08-14 | 3.75 | 3.86 | — | 3.8 | 0.006 | 0.74 | 1.0 | 0.04 | 27.72 | 0.00 | 1.421 | 10.71 | 1.45 | 8.7 | 91.3 | 0.0 | -5.38 | 0.78 | 0.83 | 2.26 | 3.8 | 0.003 | 0.56 | 0.0 | 0.03 | 27.65 | 0.00 | 2.233 | 6.85 | 0.48 | 4.8 | 95.2 | 0.0 | -1.88 | 0.52 | 0.79 | 0.83 | 1.22 | 14797 | 999 | 11 | 336 | 4 | 0 | 0 | logfile |
✔ | 4UY8 | 2773 | 2024-03-19 | 2014-08-29 | 3.8 | 4.07 | — | 4.1 | 0.010 | 1.50 | 8.0 | 0.07 | 23.51 | 0.01 | 0.879 | 12.34 | 11.16 | 16.3 | 76.9 | 6.8 | -5.04 | 0.53 | 0.64 | 0.36 | 4.0 | 0.002 | 0.57 | 0.0 | 0.03 | 23.85 | 0.00 | 1.744 | 53.30 | 5.24 | 12.4 | 85.4 | 2.1 | -3.11 | 1.58 | 0.58 | 0.79 | 1.19 | 92995 | 3468 | 47 | 3049 | 144 | 439 | 8 | logfile |
✔ | 5U9G | 8522 | 2024-03-01 | 2016-12-16 | 3.2 | 4.54 | — | 3.3 | 0.006 | 0.92 | 0.0 | 0.08 | 21.99 | 0.01 | 2.111 | 12.37 | 0.93 | 10.6 | 88.5 | 1.0 | -5.08 | 0.89 | 0.79 | 1.20 | 3.4 | 0.005 | 0.69 | 0.0 | 0.03 | 23.04 | 0.00 | 1.809 | 21.51 | 3.09 | 9.4 | 90.4 | 0.2 | -1.67 | 1.89 | 0.95 | 0.91 | 1.11 | 152649 | 6561 | 70 | 4729 | 349 | 0 | 0 | logfile |
✔ | 6YSZ | 10911 | 2024-03-16 | 2020-04-23 | 3.6 | 2.67 | — | 3.8 | 0.004 | 0.56 | 0.0 | 0.04 | 15.54 | 0.00 | 2.295 | 11.00 | 0.38 | 2.9 | 97.1 | 0.0 | -1.45 | 0.80 | 0.81 | 1.22 | 3.9 | 0.003 | 0.53 | 0.0 | 0.03 | 17.64 | 0.00 | 2.162 | 9.96 | 3.95 | 1.4 | 98.6 | 0.0 | 2.38 | 0.99 | 0.81 | 0.80 | 1.23 | 15192 | 1896 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 6DZi | 8932 | 2024-03-27 | 2018-07-05 | 3.46 | 3.52 | — | 3.5 | 0.011 | 1.05 | 21.0 | 0.07 | 23.51 | 0.01 | 1.028 | 7.00 | 0.62 | 9.8 | 89.5 | 0.8 | -4.46 | 0.78 | 0.79 | 2.41 | 3.5 | 0.003 | 0.62 | 0.0 | 0.03 | 23.45 | 0.00 | 2.010 | 10.85 | 3.27 | 6.7 | 93.3 | 0.0 | -1.34 | 1.22 | 0.82 | 0.84 | 1.68 | 150868 | 6283 | 56 | 4748 | 0 | 0 | 0 | logfile |
✔ | 7NL0 | 12453 | 2024-03-15 | 2021-02-19 | 3.5 | 3.08 | — | 3.0 | 0.006 | 0.71 | 0.0 | 0.04 | 29.74 | 0.00 | 2.147 | 12.17 | 0.00 | 4.1 | 95.9 | 0.0 | 0.67 | 0.78 | 0.81 | 3.10 | 3.1 | 0.004 | 0.59 | 0.0 | 0.03 | 29.63 | 0.00 | 2.212 | 11.00 | 2.07 | 3.0 | 97.0 | 0.0 | 2.45 | 0.27 | 0.77 | 0.81 | 2.84 | 11363 | 755 | 10 | 262 | 0 | 0 | 0 | logfile |
✔ | 7XNi | 33316 | 2024-03-21 | 2022-04-28 | 3.5 | 4.10 | 3.70 | 3.9 | 0.012 | 1.23 | 0.0 | 0.07 | 11.50 | 0.01 | 2.028 | 20.98 | 0.00 | 4.5 | 95.3 | 0.2 | -4.06 | 0.64 | 0.75 | 0.60 | 3.9 | 0.004 | 0.64 | 0.0 | 0.03 | 16.23 | 0.00 | 2.028 | 14.00 | 3.28 | 2.6 | 97.4 | 0.0 | 1.54 | 1.19 | 0.64 | 0.76 | 1.07 | 31368 | 1968 | 8 | 0 | 0 | 0 | 15652 | logfile |
✔ | 6ZBD | 11151 | 2024-03-18 | 2020-06-08 | 3.21 | 3.97 | 3.37 | 3.6 | 0.010 | 1.19 | 0.0 | 0.08 | 13.68 | 0.01 | 2.466 | 0.97 | 0.00 | 0.9 | 99.1 | 0.0 | 0.87 | 0.85 | 0.78 | 1.78 | 3.6 | 0.002 | 0.50 | 0.0 | 0.03 | 15.02 | 0.00 | 2.018 | 4.25 | 1.00 | 1.4 | 98.6 | 0.0 | 3.81 | 2.61 | 0.86 | 0.80 | 1.74 | 19519 | 1159 | 4 | 0 | 0 | 0 | 9896 | logfile |
✔ | 6ZBL | 11157 | 2024-03-23 | 2020-06-08 | 3.6 | 4.39 | 3.70 | 4.0 | 0.014 | 1.20 | 0.0 | 0.07 | 14.69 | 0.01 | 2.400 | 1.54 | 0.00 | 0.7 | 99.3 | 0.0 | -0.56 | 0.87 | 0.79 | 1.33 | 4.0 | 0.003 | 0.49 | 0.0 | 0.03 | 15.50 | 0.00 | 2.011 | 3.69 | 0.77 | 1.5 | 98.5 | 0.0 | 4.01 | 1.34 | 0.88 | 0.82 | 0.90 | 39074 | 2326 | 4 | 0 | 0 | 0 | 19788 | logfile |
✔ | 6ZBH | 11155 | 2024-03-18 | 2020-06-08 | 3.6 | 4.44 | 3.80 | 3.9 | 0.010 | 1.17 | 0.0 | 0.08 | 13.65 | 0.01 | 2.465 | 0.97 | 0.00 | 1.0 | 99.0 | 0.0 | 0.82 | 0.86 | 0.76 | 1.40 | 3.9 | 0.002 | 0.51 | 0.0 | 0.03 | 15.12 | 0.00 | 2.135 | 5.43 | 1.09 | 1.6 | 98.4 | 0.0 | 3.89 | 1.06 | 0.88 | 0.81 | 1.34 | 19523 | 1159 | 4 | 0 | 0 | 0 | 9896 | logfile |
✔ | 8FY5 | 29553 | 2024-03-15 | 2023-01-25 | 3.5 | 3.48 | 3.38 | 3.5 | 0.004 | 0.61 | 0.0 | 0.04 | 14.57 | 0.01 | 2.139 | 4.47 | 0.00 | 2.4 | 97.6 | 0.0 | 2.45 | 0.57 | 0.85 | 3.20 | 3.5 | 0.003 | 0.54 | 0.0 | 0.03 | 15.08 | 0.00 | 2.046 | 5.38 | 1.87 | 2.7 | 97.3 | 0.0 | 3.35 | 0.96 | 0.58 | 0.86 | 3.11 | 13202 | 830 | 4 | 0 | 0 | 0 | 6754 | logfile |
✔ | 8BGU | 16036 | 2024-03-10 | 2022-10-28 | 4.1 | 5.77 | 3.97 | 4.0 | 0.003 | 0.84 | 0.0 | 0.04 | 23.47 | 0.00 | 2.235 | 4.09 | 0.00 | 5.0 | 95.0 | 0.0 | -2.58 | 0.92 | 0.86 | — | 4.0 | 0.003 | 0.59 | 0.0 | 0.03 | 23.78 | 0.00 | 2.103 | 20.33 | 0.00 | 8.8 | 91.2 | 0.0 | -0.76 | 2.44 | 0.92 | 0.87 | — | 4779 | 447 | 5 | 121 | 1 | 0 | 0 | logfile |
✔ | 6ZLG | 11265 | 2024-03-22 | 2020-06-30 | 3.0 | 3.18 | — | 3.1 | 0.003 | 0.44 | 0.0 | 0.03 | 16.50 | 0.00 | 2.180 | 7.56 | 4.15 | 0.1 | 99.9 | 0.0 | 1.26 | 0.80 | 0.87 | 2.98 | 3.1 | 0.002 | 0.37 | 0.0 | 0.03 | 17.78 | 0.00 | 2.156 | 5.87 | 3.13 | 1.5 | 98.5 | 0.0 | 5.38 | 1.17 | 0.81 | 0.89 | 2.84 | 33008 | 4072 | 24 | 0 | 0 | 0 | 0 | logfile |