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Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 8GPN | 34195 | 2023-11-16 | 2022-08-26 | 3.2 | 3.80 | 3.24 | 3.4 | 0.007 | 0.62 | 0.0 | 0.04 | 26.27 | 0.00 | 2.193 | 8.82 | 0.11 | 2.6 | 97.4 | 0.0 | 1.29 | 0.84 | 0.80 | 3.26 | 3.4 | 0.004 | 0.58 | 0.0 | 0.03 | 26.76 | 0.00 | 2.123 | 9.99 | 0.34 | 2.4 | 97.5 | 0.1 | 2.27 | 1.55 | 0.85 | 0.85 | 1.96 | 15047 | 1211 | 11 | 292 | 0 | 0 | 0 | logfile |
✔ | 7CRo | 30453 | 2023-11-19 | 2020-08-14 | 3.75 | 3.86 | — | 3.8 | 0.006 | 0.74 | 1.0 | 0.04 | 27.64 | 0.00 | 1.421 | 10.71 | 1.45 | 8.7 | 91.3 | 0.0 | -5.38 | 0.78 | 0.83 | 2.26 | 3.8 | 0.003 | 0.58 | 0.0 | 0.03 | 27.90 | 0.00 | 2.223 | 6.63 | 0.24 | 5.7 | 94.3 | 0.0 | -2.35 | 0.51 | 0.79 | 0.84 | 1.39 | 14797 | 999 | 11 | 336 | 4 | 0 | 0 | logfile |
✔ | 8CSZ | 26976 | 2023-11-14 | 2022-05-13 | 3.2 | 3.55 | 3.13 | 3.3 | 0.005 | 0.67 | 0.0 | 0.04 | 19.39 | 0.00 | 1.962 | 11.72 | 0.00 | 4.9 | 95.1 | 0.0 | -0.97 | 0.84 | 0.86 | 4.03 | 3.3 | 0.004 | 0.58 | 0.0 | 0.03 | 19.16 | 0.00 | 1.962 | 10.18 | 0.71 | 4.9 | 95.1 | 0.0 | -0.25 | 2.17 | 0.84 | 0.88 | 3.60 | 8948 | 494 | 5 | 236 | 3 | 0 | 0 | logfile |
✔ | 8G8E | 29846 | 2023-11-13 | 2023-02-17 | 4.2 | 7.38 | 5.01 | 5.9 | 0.004 | 0.73 | 0.0 | 0.04 | 28.65 | 0.00 | 2.277 | 15.90 | 0.79 | 1.5 | 98.5 | 0.0 | 0.35 | 0.81 | 0.66 | — | 6.0 | 0.004 | 0.64 | 0.0 | 0.03 | 28.58 | 0.00 | 2.184 | 17.94 | 0.00 | 3.7 | 96.3 | 0.0 | -0.13 | 1.83 | 0.91 | 0.83 | — | 2464 | 140 | 3 | 64 | 0 | 0 | 0 | logfile |
✔ | 7F6V | 31482 | 2023-11-13 | 2021-06-25 | 3.66 | 4.27 | — | 4.2 | 0.005 | 0.77 | 0.0 | 0.05 | 14.14 | 0.00 | 2.356 | 10.62 | 0.00 | 6.8 | 93.2 | 0.0 | 0.27 | 0.60 | 0.78 | 1.08 | 4.2 | 0.003 | 0.65 | 0.0 | 0.03 | 17.58 | 0.00 | 2.249 | 9.40 | 0.18 | 4.4 | 95.6 | 0.0 | 4.28 | 0.84 | 0.60 | 0.77 | 0.75 | 5314 | 626 | 4 | 0 | 2 | 0 | 0 | logfile |
✔ | 7UTN | 26782 | 2023-11-14 | 2022-04-27 | 2.74 | 3.33 | 2.90 | 3.1 | 0.007 | 0.68 | 0.0 | 0.04 | 18.57 | 0.00 | 2.080 | 8.58 | 0.00 | 1.8 | 98.2 | 0.0 | 0.01 | 0.86 | 0.88 | 4.65 | 3.1 | 0.002 | 0.52 | 0.0 | 0.03 | 18.32 | 0.00 | 2.194 | 7.85 | 0.58 | 1.5 | 98.5 | 0.0 | 1.03 | 0.32 | 0.82 | 0.84 | 3.64 | 8003 | 397 | 4 | 228 | 0 | 0 | 0 | logfile |
✔ | 7DBP | 30161 | 2023-11-16 | 2020-10-21 | 4.5 | 5.32 | — | 4.3 | 0.003 | 0.45 | 0.0 | 0.03 | 27.36 | 0.00 | 2.226 | 8.54 | 0.57 | 4.4 | 94.9 | 0.7 | -0.94 | 0.87 | 0.76 | — | 4.3 | 0.005 | 0.63 | 0.0 | 0.03 | 30.39 | 0.00 | 2.159 | 26.09 | 0.00 | 3.8 | 96.2 | 0.0 | 1.11 | 2.53 | 0.90 | 0.74 | — | 13801 | 837 | 11 | 350 | 0 | 0 | 0 | logfile |
✔ | 7CR1 | 30444 | 2023-11-14 | 2020-08-12 | 3.4 | 3.42 | — | 3.5 | 0.012 | 0.73 | 0.0 | 0.04 | 14.92 | 0.00 | 2.185 | 26.22 | 0.00 | 4.1 | 95.9 | 0.0 | -2.00 | 0.59 | 0.82 | 3.14 | 3.5 | 0.003 | 0.53 | 0.0 | 0.03 | 16.48 | 0.00 | 2.133 | 7.37 | 0.60 | 2.2 | 97.8 | 0.0 | 2.94 | 1.18 | 0.58 | 0.81 | 1.83 | 8220 | 1000 | 8 | 0 | 4 | 0 | 0 | logfile |
✔ | 8DEP | 27394 | 2023-11-13 | 2022-06-21 | 3.6 | 4.01 | 3.65 | 3.8 | 0.008 | 0.76 | 0.0 | 0.07 | 13.59 | 0.01 | 2.197 | 5.44 | 0.65 | 0.5 | 99.5 | 0.0 | 3.03 | 0.47 | 0.78 | 1.93 | 3.9 | 0.003 | 0.62 | 0.0 | 0.03 | 16.80 | 0.00 | 2.214 | 7.84 | 0.32 | 1.5 | 98.5 | 0.0 | 2.16 | 0.65 | 0.46 | 0.77 | 1.68 | 3223 | 398 | 1 | 0 | 4 | 0 | 0 | logfile |
✔ | 8FY5 | 29553 | 2023-11-15 | 2023-01-25 | 3.5 | 3.48 | 3.38 | 3.5 | 0.004 | 0.61 | 0.0 | 0.04 | 14.57 | 0.01 | 2.139 | 4.47 | 0.00 | 2.4 | 97.6 | 0.0 | 2.45 | 0.57 | 0.85 | 3.20 | 3.5 | 0.003 | 0.54 | 0.0 | 0.03 | 14.97 | 0.00 | 2.043 | 5.76 | 0.29 | 2.2 | 97.8 | 0.0 | 3.45 | 0.98 | 0.58 | 0.85 | 3.07 | 13202 | 830 | 4 | 0 | 0 | 0 | 6754 | logfile |
✔ | 6ZBE | 11152 | 2023-11-17 | 2020-06-08 | 3.3 | 4.04 | 3.36 | 3.7 | 0.010 | 1.16 | 0.0 | 0.08 | 13.39 | 0.01 | 2.470 | 1.13 | 0.00 | 0.8 | 99.2 | 0.0 | 0.61 | 0.84 | 0.76 | 1.69 | 3.7 | 0.004 | 0.53 | 0.0 | 0.03 | 15.47 | 0.00 | 2.081 | 5.89 | 0.09 | 1.9 | 98.1 | 0.0 | 3.65 | 1.52 | 0.85 | 0.79 | 1.32 | 19534 | 1160 | 4 | 0 | 0 | 0 | 9902 | logfile |
✔ | 8iXJ | 35793 | 2023-11-16 | 2023-04-01 | 3.1 | 3.03 | 3.07 | 3.1 | 0.012 | 1.45 | 0.0 | 0.09 | 10.47 | 0.00 | 2.412 | 3.04 | 0.00 | 0.0 | 100.0 | 0.0 | 3.48 | 0.67 | 0.86 | 2.90 | 3.1 | 0.003 | 0.33 | 0.0 | 0.03 | 13.96 | 0.00 | 2.249 | 2.57 | 0.29 | 0.0 | 100.0 | 0.0 | 7.00 | 1.01 | 0.66 | 0.86 | 1.03 | 13760 | 1840 | 40 | 0 | 0 | 0 | 0 | logfile |
✔ | 6K43 | 9913 | 2023-11-21 | 2019-05-23 | 3.7 | 4.12 | — | 4.0 | 0.007 | 0.72 | 0.0 | 0.04 | 15.85 | 0.00 | 1.266 | 17.54 | 0.12 | 6.9 | 93.1 | 0.0 | -2.02 | 0.75 | 0.82 | 1.49 | 4.1 | 0.004 | 0.72 | 0.0 | 0.03 | 18.20 | 0.00 | 2.172 | 5.80 | 0.36 | 3.5 | 96.5 | 0.0 | 4.18 | 0.82 | 0.76 | 0.81 | 1.59 | 31808 | 3840 | 48 | 0 | 36 | 0 | 0 | logfile |
✔ | 6JYL | 9718 | 2023-11-16 | 2019-04-26 | 3.37 | 4.00 | — | 3.4 | 0.008 | 0.85 | 0.0 | 0.05 | 24.45 | 0.01 | 2.086 | 2.75 | 0.28 | 4.8 | 95.0 | 0.2 | -3.67 | 0.90 | 0.87 | 2.92 | 3.4 | 0.003 | 0.58 | 0.0 | 0.03 | 24.47 | 0.00 | 1.427 | 7.57 | 0.19 | 4.2 | 95.8 | 0.0 | 1.01 | 0.56 | 0.90 | 0.88 | 1.98 | 16136 | 1265 | 11 | 292 | 3 | 0 | 0 | logfile |
✔ | 7PGQ | 13392 | 2023-11-20 | 2021-08-15 | 3.5 | 3.89 | 3.50 | 3.6 | 0.003 | 0.45 | 0.0 | 0.03 | 10.46 | 0.00 | 1.905 | 3.80 | 0.91 | 1.2 | 98.8 | 0.0 | -0.24 | 0.81 | 0.79 | 1.38 | 3.6 | 0.002 | 0.54 | 0.0 | 0.03 | 12.83 | 0.00 | 2.038 | 5.60 | 0.17 | 3.3 | 96.6 | 0.1 | 1.23 | 0.73 | 0.81 | 0.79 | 1.31 | 31508 | 1970 | 3 | 0 | 2 | 0 | 15807 | logfile |
✔ | 7K5X | 22683 | 2023-11-17 | 2020-09-17 | 2.93 | 3.28 | — | 3.2 | 0.004 | 0.60 | 0.0 | 0.04 | 26.42 | 0.00 | 2.211 | 5.79 | 0.09 | 2.2 | 97.8 | 0.0 | 1.31 | 0.76 | 0.82 | 3.15 | 3.1 | 0.003 | 0.58 | 0.0 | 0.03 | 27.44 | 0.00 | 2.220 | 6.96 | 1.64 | 2.2 | 97.8 | 0.0 | 1.90 | 1.40 | 0.79 | 0.86 | 2.34 | 18291 | 1296 | 13 | 394 | 0 | 0 | 0 | logfile |
✔ | 7K63 | 22687 | 2023-11-17 | 2020-09-18 | 3.03 | 3.30 | — | 3.2 | 0.004 | 0.62 | 0.0 | 0.04 | 26.88 | 0.00 | 2.158 | 6.92 | 0.09 | 2.0 | 98.0 | 0.0 | 0.98 | 0.76 | 0.80 | 3.33 | 3.2 | 0.003 | 0.57 | 0.0 | 0.03 | 27.45 | 0.00 | 2.220 | 7.85 | 0.36 | 2.9 | 97.1 | 0.0 | 1.68 | 0.39 | 0.78 | 0.84 | 2.76 | 18330 | 1298 | 13 | 394 | 0 | 0 | 0 | logfile |
✔ | 7LV8 | 23529 | 2023-11-15 | 2021-02-24 | 3.4 | 3.85 | 3.57 | 3.8 | 0.003 | 0.65 | 0.0 | 0.04 | 27.28 | 0.00 | 1.334 | 3.06 | 0.17 | 2.7 | 97.3 | 0.0 | -3.26 | 0.70 | 0.78 | 0.97 | 3.9 | 0.004 | 0.58 | 0.0 | 0.03 | 27.68 | 0.00 | 2.243 | 9.22 | 0.33 | 2.7 | 97.3 | 0.0 | 2.29 | 0.56 | 0.70 | 0.79 | 1.18 | 10651 | 764 | 10 | 242 | 0 | 0 | 0 | logfile |
✔ | 6UPH | 20839 | 2023-11-15 | 2019-10-17 | 2.7 | 3.01 | 2.85 | 3.0 | 0.007 | 0.67 | 0.0 | 0.04 | 26.16 | 0.00 | 2.216 | 4.33 | 0.00 | 1.8 | 98.2 | 0.0 | -5.67 | 0.70 | 0.87 | 4.13 | 3.0 | 0.003 | 0.60 | 0.0 | 0.03 | 27.60 | 0.00 | 2.121 | 4.27 | 1.45 | 0.8 | 99.2 | 0.0 | 1.21 | 0.35 | 0.66 | 0.87 | 2.32 | 10677 | 732 | 10 | 238 | 0 | 0 | 0 | logfile |
✔ | 7VoJ | 32050 | 2023-11-13 | 2021-10-14 | 3.0 | 3.21 | — | 3.3 | 0.008 | 1.01 | 0.0 | 0.06 | 13.59 | 0.01 | 2.061 | 7.62 | 1.73 | 3.3 | 96.5 | 0.3 | -2.46 | 0.65 | 0.83 | 2.35 | 3.3 | 0.002 | 0.56 | 0.0 | 0.03 | 16.62 | 0.00 | 1.924 | 4.63 | 2.02 | 2.9 | 97.1 | 0.0 | 3.11 | 2.16 | 0.60 | 0.82 | 1.75 | 6318 | 800 | 4 | 0 | 6 | 0 | 0 | logfile |