The table shows a selection of parameters. Activate more columns using
the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 7M18 | 23615 | 2022-12-11 | 2021-03-12 | 3.38 | 4.09 | — | 4.1 | 0.007 | 1.50 | 0.0 | 0.17 | 17.26 | 0.01 | 1.728 | 23.92 | 0.28 | 10.4 | 89.3 | 0.3 | -2.48 | 0.74 | 0.73 | 0.41 | 4.1 | 0.004 | 0.94 | 0.0 | 0.05 | 17.67 | 0.01 | 2.043 | 19.93 | 0.42 | 10.1 | 89.8 | 0.1 | -2.08 | 0.52 | 0.75 | 0.74 | 0.41 | 54064 | 6904 | 32 | 8 | 16 | 0 | 0 | logfile |
✔ | 5LKH | 4068 | 2022-12-19 | 2016-07-22 | 3.46 | 5.27 | — | 11.0 | 0.018 | 2.37 | 65.0 | 0.12 | 12.66 | 0.02 | 2.255 | 87.25 | 1.96 | 3.4 | 95.2 | 1.4 | -0.27 | 0.38 | 0.17 | -0.03 | 8.8 | 0.003 | 0.81 | 0.0 | 0.04 | 15.64 | 0.00 | 2.120 | 25.20 | 0.34 | 6.3 | 93.7 | 0.0 | -0.80 | 2.12 | 0.50 | 0.56 | 0.41 | 37345 | 4740 | 5 | 0 | 0 | 0 | 0 | logfile |
✔ | 7P1i | 13161 | 2022-12-11 | 2021-07-01 | 3.15 | 4.49 | 3.18 | 4.4 | 0.002 | 0.57 | 0.0 | 0.04 | 11.18 | 0.00 | 2.265 | 8.39 | 5.90 | 4.3 | 95.7 | 0.0 | 3.38 | 0.55 | 0.71 | 0.60 | 4.3 | 0.004 | 1.10 | 0.0 | 0.05 | 15.07 | 0.00 | 2.137 | 23.12 | 0.70 | 6.5 | 93.5 | 0.0 | 0.59 | 1.42 | 0.57 | 0.73 | 0.42 | 6644 | 884 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 7W0C | 32238 | 2022-12-13 | 2021-11-18 | 3.93 | 4.02 | — | 3.8 | 0.002 | 0.55 | 0.0 | 0.04 | 13.50 | 0.00 | 2.105 | 14.50 | 0.07 | 4.2 | 95.8 | 0.1 | -0.14 | 0.86 | 0.73 | 0.17 | 3.8 | 0.003 | 0.62 | 0.0 | 0.04 | 15.16 | 0.00 | 2.172 | 16.19 | 0.37 | 4.9 | 95.1 | 0.1 | -0.01 | 0.46 | 0.86 | 0.74 | 0.42 | 13663 | 1492 | 5 | 72 | 2 | 0 | 0 | logfile |
✔ | 7CR4 | 30447 | 2022-12-13 | 2020-08-12 | 3.9 | 4.24 | — | 3.9 | 0.008 | 0.65 | 0.0 | 0.04 | 13.14 | 0.00 | 1.833 | 103.11 | 0.00 | 4.6 | 95.4 | 0.0 | -2.89 | 0.59 | 0.76 | 0.53 | 3.9 | 0.004 | 0.86 | 0.0 | 0.04 | 16.35 | 0.00 | 2.163 | 25.11 | 0.54 | 3.2 | 96.8 | 0.0 | 0.27 | 1.42 | 0.57 | 0.77 | 0.42 | 15988 | 1968 | 12 | 0 | 4 | 0 | 0 | logfile |
✔ | 6W6K | 21558 | 2022-12-22 | 2020-03-17 | 3.6 | 3.84 | — | 3.7 | 0.002 | 0.47 | 0.0 | 0.03 | 14.66 | 0.00 | 2.113 | 10.39 | 0.00 | 6.9 | 93.1 | 0.0 | -4.28 | 0.70 | 0.59 | 0.52 | 3.7 | 0.004 | 0.81 | 0.0 | 0.04 | 17.50 | 0.01 | 2.010 | 22.80 | 1.18 | 14.2 | 85.8 | 0.1 | -3.32 | 1.40 | 0.75 | 0.67 | 0.42 | 46934 | 1873 | 19 | 1534 | 1 | 0 | 0 | logfile |
✔ | 7L48 | 23157 | 2022-12-12 | 2020-12-18 | 3.9 | 4.22 | — | 3.9 | 0.005 | 0.96 | 2.0 | 0.06 | 16.90 | 0.01 | 2.263 | 6.23 | 0.22 | 9.8 | 90.2 | 0.0 | -3.57 | 0.88 | 0.80 | 0.79 | 3.9 | 0.003 | 0.66 | 0.0 | 0.04 | 17.11 | 0.00 | 2.146 | 19.03 | 0.33 | 7.9 | 92.1 | 0.0 | -0.98 | 1.22 | 0.89 | 0.82 | 0.42 | 11488 | 1041 | 5 | 144 | 4 | 0 | 0 | logfile |
✔ | 6W7M | 21571 | 2022-12-22 | 2020-03-19 | 3.8 | 3.72 | — | 3.6 | 0.002 | 0.58 | 0.0 | 0.03 | 16.56 | 0.00 | 2.031 | 14.83 | 0.10 | 7.4 | 92.3 | 0.3 | -3.67 | 0.68 | 0.56 | 0.12 | 3.6 | 0.003 | 0.74 | 0.0 | 0.04 | 18.06 | 0.01 | 2.049 | 23.10 | 0.89 | 11.3 | 88.5 | 0.3 | -2.41 | 1.33 | 0.71 | 0.61 | 0.43 | 50694 | 2319 | 20 | 1512 | 0 | 0 | 0 | logfile |
✔ | 6Qi8 | 4552 | 2022-12-13 | 2019-01-18 | 3.75 | 3.92 | — | 10.4 | 0.004 | 0.91 | 0.0 | 0.05 | 16.35 | 0.01 | 1.999 | 4.30 | 0.19 | 5.5 | 94.5 | 0.0 | -5.84 | 0.17 | 0.02 | 0.43 | 9.9 | 0.004 | 0.95 | 0.0 | 0.05 | 17.69 | 0.00 | 2.099 | 19.02 | 0.32 | 8.5 | 91.5 | 0.0 | -2.67 | 1.59 | 0.33 | 0.24 | 0.43 | 14789 | 1907 | 12 | 0 | 6 | 0 | 0 | logfile |
✔ | 7WDF | 32437 | 2022-12-16 | 2021-12-21 | 3.9 | 4.20 | — | 4.0 | 0.002 | 0.51 | 0.0 | 0.04 | 7.63 | 0.00 | 2.170 | 7.54 | 0.00 | 4.3 | 95.6 | 0.1 | -1.73 | 0.54 | 0.40 | 0.73 | 4.0 | 0.003 | 0.78 | 0.0 | 0.05 | 14.28 | 0.00 | 2.140 | 18.82 | 0.47 | 4.7 | 95.3 | 0.0 | -0.83 | 1.60 | 0.76 | 0.71 | 0.43 | 31998 | 4101 | 7 | 0 | 0 | 0 | 0 | logfile |
✔ | 6MDP | 9103 | 2022-12-21 | 2018-09-04 | 3.8 | 5.39 | — | 4.1 | 0.009 | 1.42 | 0.0 | 0.17 | 12.33 | 0.01 | 2.016 | 5.29 | 0.33 | 2.4 | 97.5 | 0.1 | -3.57 | 0.80 | 0.67 | 0.10 | 4.2 | 0.003 | 0.79 | 0.0 | 0.15 | 13.26 | 0.00 | 1.963 | 14.56 | 0.08 | 7.1 | 92.9 | 0.0 | -1.30 | 0.73 | 0.89 | 0.84 | 0.44 | 45210 | 2832 | 13 | 0 | 11 | 0 | 22777 | logfile |
✔ | 7TR8 | 26082 | 2022-12-18 | 2022-01-28 | 3.6 | 4.39 | — | 4.1 | 0.002 | 0.54 | 0.0 | 0.04 | 14.37 | 0.00 | 2.037 | 11.95 | 0.03 | 7.5 | 92.2 | 0.4 | -1.00 | 0.75 | 0.46 | -0.02 | 4.1 | 0.003 | 0.81 | 0.0 | 0.05 | 16.81 | 0.00 | 2.062 | 22.18 | 0.29 | 8.3 | 91.3 | 0.3 | -1.77 | 2.23 | 0.83 | 0.71 | 0.44 | 33581 | 4192 | 18 | 45 | 2 | 0 | 0 | logfile |
✔ | 8AZS | 15770 | 2022-12-12 | 2022-09-06 | 2.9 | 2.78 | 2.55 | 2.8 | 0.011 | 1.50 | 0.0 | 0.12 | 16.09 | 0.01 | 0.017 | 1346.55 | 0.00 | 3.1 | 96.9 | 0.0 | -1.98 | 0.27 | 0.40 | 5.06 | 3.3 | 0.027 | 3.71 | 25.0 | 0.19 | 25.02 | 0.02 | 1.804 | 345.70 | 17.56 | 51.6 | 42.5 | 5.9 | -8.21 | 18.78 | 0.21 | 0.21 | 0.44 | 9036 | 1224 | 36 | 0 | 0 | 0 | 0 | logfile |
✔ | 7Z4G | 14496 | 2022-12-12 | 2022-03-03 | 3.64 | 4.65 | 3.78 | 3.9 | 0.003 | 0.48 | 0.0 | 0.03 | 13.82 | 0.00 | 2.209 | 12.87 | 1.03 | 1.9 | 98.1 | 0.0 | 1.30 | 0.85 | 0.76 | 0.95 | 3.9 | 0.003 | 0.60 | 0.0 | 0.04 | 16.43 | 0.00 | 2.168 | 19.12 | 0.38 | 3.7 | 96.2 | 0.1 | 0.90 | 2.10 | 0.86 | 0.78 | 0.45 | 12714 | 1188 | 4 | 144 | 0 | 0 | 0 | logfile |
✔ | 7WK5 | 32559 | 2022-12-16 | 2022-01-08 | 3.66 | 3.93 | — | 3.7 | 0.005 | 0.84 | 1.0 | 0.05 | 13.40 | 0.01 | 1.646 | 3.45 | 0.27 | 3.9 | 96.0 | 0.1 | -4.59 | 0.66 | 0.58 | 0.35 | 3.7 | 0.005 | 0.81 | 0.0 | 0.05 | 15.40 | 0.01 | 2.029 | 18.64 | 0.43 | 6.4 | 93.6 | 0.0 | -1.65 | 1.03 | 0.69 | 0.65 | 0.46 | 29601 | 3750 | 4 | 0 | 0 | 0 | 0 | logfile |
✔ | 7R03 | 14218 | 2022-12-19 | 2022-02-01 | 3.6 | 4.69 | — | 3.8 | 0.006 | 1.15 | 1.0 | 0.06 | 13.88 | 0.01 | 2.224 | 5.91 | 0.00 | 4.2 | 95.8 | 0.0 | -2.18 | 0.86 | 0.76 | 0.62 | 3.8 | 0.003 | 0.71 | 0.0 | 0.04 | 15.09 | 0.00 | 2.155 | 12.65 | 0.13 | 4.2 | 95.8 | 0.0 | 1.22 | 0.46 | 0.86 | 0.76 | 0.46 | 35621 | 4487 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 3JAD | 6344 | 2022-12-12 | 2015-06-08 | 3.9 | 2.16 | — | 3.8 | 0.008 | 1.32 | 0.0 | 0.06 | 8.46 | 0.00 | 2.250 | 17.07 | 0.43 | 2.7 | 97.3 | 0.0 | -2.13 | 0.68 | 0.72 | 0.33 | 2.6 | 0.004 | 0.80 | 0.0 | 0.04 | 12.88 | 0.00 | 2.172 | 19.50 | 0.26 | 5.1 | 94.9 | 0.0 | -0.14 | 1.24 | 0.70 | 0.78 | 0.46 | 12705 | 1685 | 15 | 0 | 15 | 0 | 0 | logfile |
✔ | 6XQB | 22288 | 2022-12-13 | 2020-07-09 | 3.4 | 4.22 | — | 3.9 | 0.012 | 1.28 | 0.0 | 0.06 | 12.24 | 0.01 | 2.069 | 14.03 | 0.23 | 15.2 | 84.8 | 0.0 | -5.15 | 0.75 | 0.57 | 0.58 | 3.9 | 0.003 | 0.69 | 0.0 | 0.04 | 14.25 | 0.00 | 1.914 | 22.48 | 0.23 | 10.4 | 89.6 | 0.0 | -2.39 | 1.28 | 0.76 | 0.60 | 0.46 | 16323 | 1008 | 7 | 15 | 3 | 0 | 7987 | logfile |
✔ | 7SoY | 25363 | 2022-12-12 | 2021-11-01 | 3.4 | 4.73 | — | 3.7 | 0.003 | 0.63 | 0.0 | 0.04 | 12.63 | 0.00 | 2.231 | 13.04 | 0.37 | 1.7 | 98.3 | 0.0 | 1.32 | 0.90 | 0.83 | 0.53 | 3.7 | 0.004 | 0.68 | 0.0 | 0.04 | 14.40 | 0.00 | 2.048 | 17.96 | 0.37 | 2.4 | 97.6 | 0.0 | 1.29 | 0.69 | 0.91 | 0.85 | 0.46 | 12180 | 1529 | 4 | 0 | 0 | 0 | 0 | logfile |
✔ | 7WTA | 32773 | 2022-12-14 | 2022-02-04 | 3.9 | 6.12 | — | 3.5 | 0.008 | 0.82 | 0.0 | 0.04 | 13.23 | 0.00 | 2.171 | 19.79 | 0.00 | 8.2 | 91.8 | 0.0 | -0.51 | 0.89 | 0.81 | 0.46 | 3.5 | 0.003 | 0.74 | 0.0 | 0.04 | 14.73 | 0.00 | 2.060 | 21.08 | 0.22 | 8.2 | 91.7 | 0.1 | -0.63 | 0.46 | 0.90 | 0.82 | 0.46 | 21080 | 2736 | 8 | 0 | 4 | 0 | 0 | logfile |