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Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 7RYE | 24735 | 2024-03-18 | 2021-08-25 | 3.9 | 4.10 | — | 4.0 | 0.003 | 0.65 | 0.0 | 0.04 | 14.57 | 0.00 | 2.090 | 14.13 | 0.00 | 3.7 | 96.3 | 0.0 | 1.07 | 0.76 | 0.69 | -0.18 | 4.0 | 0.003 | 0.72 | 0.0 | 0.04 | 17.76 | 0.00 | 2.100 | 15.41 | 3.80 | 4.0 | 96.0 | 0.0 | 1.41 | 1.07 | 0.81 | 0.80 | 0.20 | 19708 | 2535 | 24 | 0 | 0 | 0 | 0 | logfile |
✔ | 7Yi5 | 33852 | 2024-03-19 | 2022-07-14 | 3.96 | 7.42 | 3.88 | 2.7 | 0.005 | 0.66 | 0.0 | 0.04 | 23.56 | 0.00 | 2.006 | 17.91 | 0.29 | 4.5 | 95.5 | 0.0 | 0.33 | 0.87 | 0.84 | 0.30 | 2.7 | 0.006 | 0.66 | 0.0 | 0.04 | 24.10 | 0.00 | 2.021 | 23.08 | 2.21 | 6.1 | 93.9 | 0.0 | 0.49 | 1.19 | 0.87 | 0.84 | 0.21 | 25389 | 2364 | 18 | 302 | 5 | 0 | 0 | logfile |
✔ | 8B3P | 15832 | 2024-03-17 | 2022-09-16 | 2.81 | 3.73 | 2.92 | 3.3 | 0.008 | 1.53 | 30.0 | 0.10 | 16.99 | 0.00 | 2.469 | 4.32 | 0.78 | 0.0 | 100.0 | 0.0 | -0.91 | 0.82 | 0.93 | 1.32 | 3.3 | 0.003 | 0.54 | 0.0 | 0.03 | 18.16 | 0.00 | 2.220 | 4.46 | 2.07 | 0.0 | 100.0 | 0.0 | 5.67 | 1.29 | 0.80 | 0.90 | 0.22 | 17620 | 2370 | 55 | 0 | 0 | 0 | 0 | logfile |
✔ | 8CSA | 26961 | 2024-03-19 | 2022-05-12 | 3.84 | 4.24 | 3.87 | 3.9 | 0.012 | 1.75 | 3.0 | 0.09 | 13.74 | 0.02 | 2.527 | 0.19 | 1.18 | 6.0 | 93.8 | 0.2 | -1.46 | 0.82 | 0.78 | 0.63 | 3.9 | 0.003 | 0.63 | 0.0 | 0.04 | 15.03 | 0.00 | 2.087 | 11.86 | 1.98 | 3.7 | 96.3 | 0.0 | -0.07 | 1.66 | 0.83 | 0.78 | 0.22 | 23442 | 3003 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 8FCQ | 28990 | 2024-03-23 | 2022-12-01 | 3.93 | 4.35 | 4.09 | 4.2 | 0.011 | 0.85 | 0.0 | 0.06 | 12.29 | 0.00 | 2.387 | 1.15 | 0.03 | 1.7 | 98.2 | 0.1 | 0.31 | 0.69 | 0.55 | 0.57 | 4.2 | 0.003 | 0.81 | 0.0 | 0.05 | 15.80 | 0.00 | 2.067 | 16.04 | 2.64 | 2.4 | 97.6 | 0.0 | 0.77 | 1.17 | 0.81 | 0.79 | 0.22 | 36904 | 4667 | 13 | 0 | 12 | 0 | 0 | logfile |
✔ | 7DPA | 30802 | 2024-03-22 | 2020-12-18 | 3.8 | 4.83 | 3.79 | 3.0 | 0.006 | 0.84 | 0.0 | 0.05 | 15.30 | 0.01 | 2.038 | 22.25 | 0.00 | 12.3 | 87.7 | 0.0 | -3.05 | 0.70 | 0.39 | 0.50 | 3.0 | 0.003 | 0.79 | 0.0 | 0.04 | 16.96 | 0.00 | 2.026 | 21.63 | 1.56 | 8.0 | 92.0 | 0.0 | -1.62 | 1.16 | 0.89 | 0.78 | 0.22 | 32858 | 4034 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 7o7R | 12754 | 2024-03-24 | 2021-04-13 | 3.9 | 4.51 | — | 4.3 | 0.013 | 1.33 | 8.0 | 0.07 | 16.90 | 0.01 | 1.912 | 20.97 | 1.07 | 18.3 | 81.4 | 0.3 | -5.78 | 0.83 | 0.75 | 0.13 | 4.3 | 0.003 | 0.92 | 0.0 | 0.05 | 17.17 | 0.00 | 1.989 | 20.66 | 3.76 | 9.6 | 90.3 | 0.1 | -3.27 | 0.83 | 0.83 | 0.76 | 0.23 | 40530 | 5126 | 16 | 0 | 40 | 0 | 0 | logfile |
✔ | 7NZM | 12665 | 2024-03-14 | 2021-03-24 | 3.96 | 6.56 | 4.22 | 4.2 | 0.007 | 1.12 | 0.0 | 0.06 | 14.32 | 0.01 | 1.774 | 11.10 | 0.00 | 3.8 | 96.2 | 0.0 | -1.56 | 0.77 | 0.51 | -0.04 | 4.3 | 0.005 | 1.03 | 0.0 | 0.04 | 15.04 | 0.00 | 2.012 | 21.70 | 0.52 | 2.9 | 97.1 | 0.0 | 0.39 | 1.50 | 0.95 | 0.84 | 0.23 | 9109 | 1157 | 8 | 0 | 4 | 0 | 0 | logfile |
✔ | 7Yi4 | 33851 | 2024-03-19 | 2022-07-14 | 3.96 | 8.09 | 3.85 | 2.7 | 0.004 | 0.61 | 0.0 | 0.04 | 23.49 | 0.00 | 2.041 | 12.68 | 0.10 | 3.9 | 96.1 | 0.0 | 1.12 | 0.85 | 0.82 | 0.23 | 2.7 | 0.004 | 0.59 | 0.0 | 0.04 | 23.83 | 0.00 | 2.059 | 15.70 | 1.39 | 4.0 | 96.0 | 0.0 | 1.42 | 1.60 | 0.85 | 0.83 | 0.23 | 25351 | 2359 | 18 | 302 | 5 | 0 | 0 | logfile |
✔ | 5KPS | 8279 | 2024-03-25 | 2016-07-05 | 3.9 | 5.38 | 4.05 | 3.9 | 0.008 | 1.11 | 0.0 | 0.08 | 22.56 | 0.01 | 1.923 | 27.29 | 0.32 | 12.5 | 82.8 | 4.6 | -4.23 | 0.90 | 0.78 | 0.50 | 3.9 | 0.004 | 0.73 | 0.0 | 0.04 | 23.82 | 0.01 | 2.016 | 31.04 | 4.36 | 10.0 | 89.2 | 0.8 | -2.04 | 2.12 | 0.95 | 0.90 | 0.23 | 149128 | 6091 | 58 | 4734 | 0 | 0 | 0 | logfile |
✔ | 6QYM | 4679 | 2024-03-20 | 2019-03-09 | 3.6 | 3.25 | — | 4.0 | 0.007 | 0.89 | 0.0 | 0.05 | 9.66 | 0.01 | 2.201 | 8.77 | 0.00 | 6.5 | 93.5 | 0.0 | -4.63 | 0.62 | 0.60 | 0.02 | 3.5 | 0.005 | 0.85 | 0.0 | 0.05 | 16.89 | 0.00 | 2.019 | 25.21 | 4.08 | 4.9 | 95.1 | 0.0 | -0.25 | 2.33 | 0.69 | 0.68 | 0.25 | 26880 | 3360 | 12 | 0 | 0 | 0 | 0 | logfile |
✔ | 5VA1 | 8650 | 2024-03-17 | 2017-03-24 | 3.7 | 5.99 | — | 4.4 | 0.008 | 1.02 | 0.0 | 0.06 | 11.84 | 0.00 | 1.715 | 8.09 | 1.30 | 4.6 | 95.4 | 0.0 | -3.52 | 0.65 | 0.78 | 0.25 | 4.5 | 0.003 | 0.87 | 0.0 | 0.05 | 15.11 | 0.00 | 2.140 | 18.87 | 2.86 | 1.8 | 98.2 | 0.0 | 0.14 | 2.72 | 0.66 | 0.83 | 0.25 | 17628 | 2240 | 4 | 0 | 0 | 0 | 0 | logfile |
✔ | 7PC2 | 13316 | 2024-03-20 | 2021-08-03 | 2.8 | 3.39 | — | 6.5 | 0.033 | 1.66 | 5.0 | 0.06 | 19.87 | 0.01 | 1.809 | 9.01 | 1.49 | 7.8 | 92.2 | 0.0 | -3.81 | 0.43 | 0.05 | -0.14 | 2.8 | 0.004 | 0.92 | 0.0 | 0.05 | 15.28 | 0.00 | 2.070 | 15.63 | 2.61 | 6.8 | 93.2 | 0.0 | -1.15 | 1.37 | 0.58 | 0.35 | 0.25 | 27063 | 3093 | 68 | 0 | 210 | 0 | 0 | logfile |
✔ | 5G2X | 3331 | 2024-03-17 | 2016-04-16 | 3.8 | 3.49 | — | 3.4 | 0.001 | 0.32 | 0.0 | 0.02 | 21.03 | 0.00 | 2.219 | 4.36 | 0.45 | 19.7 | 74.4 | 5.9 | -5.72 | 0.51 | 0.30 | -0.09 | 3.3 | 0.007 | 1.02 | 0.0 | 0.05 | 25.19 | 0.01 | 1.900 | 45.40 | 4.54 | 22.7 | 76.1 | 1.3 | -5.20 | 2.37 | 0.80 | 0.67 | 0.25 | 19072 | 487 | 3 | 704 | 0 | 0 | 0 | logfile |
✔ | 7XUN | 33475 | 2024-03-10 | 2022-05-19 | 3.4 | 3.91 | 3.41 | 3.8 | 0.002 | 0.57 | 0.0 | 0.04 | 13.72 | 0.00 | 2.129 | 11.02 | 0.00 | 4.1 | 95.9 | 0.0 | -0.92 | 0.72 | 0.76 | 0.33 | 3.8 | 0.004 | 0.68 | 0.0 | 0.05 | 15.88 | 0.00 | 2.137 | 13.82 | 2.77 | 5.2 | 94.8 | 0.0 | -0.25 | 1.11 | 0.73 | 0.78 | 0.26 | 5591 | 741 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 8X63 | 38078 | 2024-03-10 | 2023-11-20 | 3.2 | 4.09 | 3.72 | 4.5 | 0.005 | 0.74 | 1.0 | 0.05 | 15.26 | 0.01 | 2.411 | 9.43 | 0.81 | 8.0 | 92.0 | 0.0 | -0.11 | 0.13 | 0.13 | 0.69 | 4.1 | 0.004 | 0.74 | 0.0 | 0.04 | 17.26 | 0.01 | 2.293 | 9.87 | 2.85 | 7.6 | 92.4 | 0.0 | -0.32 | 1.25 | 0.29 | 0.45 | 0.26 | 2252 | 270 | 2 | 0 | 1 | 0 | 0 | logfile |
✔ | 8J5Y | 33733 | 2024-03-15 | 2023-04-24 | 3.07 | 3.50 | 3.24 | 20.0 | 0.004 | 0.84 | 0.0 | 0.05 | 13.88 | 0.01 | 2.153 | 12.97 | 0.00 | 6.0 | 93.7 | 0.3 | -1.55 | 0.08 | 0.00 | 0.39 | 3.4 | 0.003 | 0.74 | 0.0 | 0.04 | 15.95 | 0.00 | 2.112 | 15.74 | 2.42 | 7.6 | 92.3 | 0.1 | -1.26 | 1.56 | 0.12 | 0.06 | 0.26 | 10905 | 1389 | 4 | 0 | 0 | 0 | 0 | logfile |
✔ | 8oZ6 | 17299 | 2024-03-22 | 2023-05-08 | 3.97 | 4.30 | 4.11 | 4.0 | 0.005 | 0.73 | 0.0 | 0.04 | 16.73 | 0.01 | 2.093 | 14.91 | 0.00 | 5.0 | 94.7 | 0.3 | -1.10 | 0.67 | 0.58 | 0.41 | 4.0 | 0.003 | 0.74 | 0.0 | 0.04 | 18.74 | 0.00 | 2.016 | 23.80 | 2.66 | 6.6 | 93.2 | 0.2 | -1.27 | 1.45 | 0.69 | 0.64 | 0.26 | 32004 | 3564 | 16 | 136 | 0 | 0 | 0 | logfile |
✔ | 8DGi | 27423 | 2024-03-16 | 2022-06-23 | 3.94 | 4.27 | 4.04 | 4.1 | 0.005 | 1.16 | 4.0 | 0.06 | 15.93 | 0.01 | 2.263 | 8.89 | 0.67 | 5.9 | 93.8 | 0.3 | -2.32 | 0.67 | 0.52 | 0.27 | 4.1 | 0.004 | 0.75 | 0.0 | 0.04 | 16.48 | 0.00 | 2.047 | 20.88 | 3.53 | 6.9 | 92.9 | 0.2 | -0.43 | 0.55 | 0.66 | 0.51 | 0.27 | 13580 | 1690 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 7K8A | 22724 | 2024-03-15 | 2020-09-26 | 3.65 | 3.57 | — | 3.7 | 0.004 | 0.92 | 1.0 | 0.05 | 13.38 | 0.01 | 2.226 | 16.09 | 0.17 | 6.4 | 93.6 | 0.0 | -1.30 | 0.40 | 0.55 | 0.67 | 3.7 | 0.004 | 0.82 | 0.0 | 0.04 | 15.98 | 0.01 | 2.180 | 17.79 | 5.44 | 5.7 | 94.2 | 0.1 | -0.95 | 0.44 | 0.43 | 0.57 | 0.27 | 5513 | 723 | 1 | 0 | 0 | 0 | 0 | logfile |