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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 7UNL | 26626 | 2022-12-12 | 2022-04-11 | 2.45 | 3.35 | 2.50 | 3.1 | 0.003 | 0.56 | 0.0 | 0.04 | 14.66 | 0.00 | 2.143 | 2.41 | 1.94 | 1.1 | 98.9 | 0.0 | 2.30 | 0.72 | 0.83 | 3.52 | 3.1 | 0.003 | 0.52 | 0.0 | 0.04 | 14.65 | 0.00 | 2.011 | 3.27 | 1.29 | 0.8 | 99.2 | 0.0 | 4.42 | 0.66 | 0.56 | 0.81 | 3.07 | 11724 | 734 | 6 | 0 | 8 | 120 | 5900 | logfile |
✔ | 6XKJ | 22219 | 2022-12-12 | 2020-06-26 | 3.54 | 3.39 | — | 3.4 | 0.009 | 0.83 | 0.0 | 0.05 | 14.92 | 0.00 | 2.246 | 12.86 | 0.00 | 2.4 | 97.6 | 0.0 | 0.54 | 0.62 | 0.85 | 1.81 | 3.3 | 0.003 | 0.70 | 0.0 | 0.04 | 18.71 | 0.00 | 2.200 | 11.78 | 0.65 | 0.8 | 99.2 | 0.0 | 1.03 | 1.39 | 0.61 | 0.85 | 1.50 | 11056 | 1360 | 16 | 0 | 0 | 0 | 0 | logfile |
✔ | 7KoD | 22972 | 2022-12-13 | 2020-11-08 | 1.655 | 2.30 | — | 1.9 | 0.001 | 0.33 | 0.0 | 0.03 | 8.49 | 0.00 | 2.288 | 0.80 | 0.00 | 1.1 | 98.9 | 0.0 | 6.14 | 0.91 | 0.91 | 8.16 | 2.0 | 0.005 | 0.51 | 0.0 | 0.04 | 13.89 | 0.00 | 1.846 | 2.78 | 0.11 | 0.8 | 99.2 | 0.0 | 5.13 | 0.58 | 0.87 | 0.93 | 8.03 | 68186 | 4128 | 48 | 0 | 0 | 1727 | 32643 | logfile |
✔ | 7SJ1 | 25152 | 2022-12-11 | 2021-10-15 | 2.9 | 3.13 | — | 3.3 | 0.011 | 1.01 | 0.0 | 0.04 | 16.65 | 0.00 | 2.351 | 8.63 | 0.61 | 2.1 | 97.9 | 0.0 | 2.80 | 0.58 | 0.77 | 3.41 | 3.3 | 0.003 | 0.65 | 0.0 | 0.04 | 16.09 | 0.00 | 2.230 | 9.46 | 0.61 | 0.8 | 99.2 | 0.0 | 2.93 | 1.09 | 0.50 | 0.78 | 2.36 | 6463 | 784 | 9 | 0 | 34 | 1 | 0 | logfile |
✔ | 6oVH | 20212 | 2022-12-12 | 2019-05-07 | 2.6 | 2.81 | 2.71 | 2.8 | 0.014 | 1.10 | 0.0 | 0.04 | 17.48 | 0.01 | 1.203 | 1.15 | 4.55 | 1.0 | 99.0 | 0.0 | -6.34 | 0.75 | 0.87 | 4.63 | 2.8 | 0.003 | 0.76 | 0.0 | 0.04 | 18.69 | 0.00 | 2.041 | 3.16 | 0.19 | 0.8 | 99.2 | 0.0 | 2.54 | 0.98 | 0.77 | 0.89 | 3.84 | 10895 | 1272 | 36 | 0 | 68 | 171 | 0 | logfile |
✔ | 7WDB | 32436 | 2022-12-14 | 2021-12-21 | 2.4 | 2.54 | — | 2.6 | 0.016 | 1.47 | 0.0 | 0.05 | 14.91 | 0.01 | 2.275 | 6.62 | 0.84 | 0.8 | 99.2 | 0.0 | 2.67 | 0.78 | 0.91 | 4.31 | 2.6 | 0.002 | 0.47 | 0.0 | 0.03 | 15.91 | 0.00 | 2.199 | 5.31 | 1.35 | 0.8 | 99.2 | 0.0 | 2.85 | 1.05 | 0.76 | 0.91 | 4.33 | 22400 | 2660 | 8 | 0 | 28 | 0 | 0 | logfile |
✔ | 6ZLQ | 11272 | 2022-12-18 | 2020-07-01 | 3.3 | 3.41 | — | 3.3 | 0.009 | 0.74 | 0.0 | 0.04 | 17.49 | 0.00 | 0.983 | 16.27 | 8.48 | 3.6 | 96.4 | 0.0 | -3.01 | 0.81 | 0.83 | 1.76 | 3.3 | 0.003 | 0.60 | 0.0 | 0.03 | 18.12 | 0.00 | 1.273 | 15.03 | 0.85 | 0.9 | 99.1 | 0.0 | 3.36 | 0.70 | 0.80 | 0.84 | 1.08 | 33823 | 4185 | 38 | 0 | 16 | 0 | 0 | logfile |
✔ | 6ZBL | 11157 | 2022-12-20 | 2020-06-08 | 3.6 | 4.39 | 3.70 | 4.0 | 0.014 | 1.20 | 0.0 | 0.07 | 14.69 | 0.01 | 2.400 | 1.54 | 0.00 | 0.7 | 99.3 | 0.0 | -0.56 | 0.87 | 0.79 | 1.33 | 4.0 | 0.002 | 0.46 | 0.0 | 0.03 | 15.56 | 0.00 | 2.022 | 3.45 | 0.09 | 0.9 | 99.1 | 0.0 | 4.18 | 1.33 | 0.88 | 0.82 | 0.90 | 39074 | 2326 | 4 | 0 | 0 | 0 | 19788 | logfile |
✔ | 8D1K | 27133 | 2022-12-13 | 2022-05-27 | 2.28 | 2.51 | 2.43 | 2.5 | 0.013 | 1.28 | 0.0 | 0.07 | 18.10 | 0.01 | 2.287 | 6.74 | 2.65 | 1.1 | 98.9 | 0.0 | 0.89 | 0.70 | 0.91 | 4.11 | 2.5 | 0.005 | 0.61 | 0.0 | 0.04 | 17.13 | 0.00 | 2.224 | 5.35 | 1.47 | 0.9 | 99.1 | 0.0 | 1.11 | 0.90 | 0.66 | 0.89 | 4.08 | 16305 | 1880 | 10 | 0 | 45 | 0 | 0 | logfile |
✔ | 6RAH | 4775 | 2022-12-12 | 2019-04-06 | 2.8 | 2.99 | 3.01 | 2.9 | 0.008 | 1.53 | 9.0 | 0.09 | 9.90 | 0.01 | 2.022 | 9.92 | 0.00 | 2.1 | 97.7 | 0.2 | -2.51 | 0.72 | 0.81 | 2.84 | 2.9 | 0.003 | 0.63 | 0.0 | 0.04 | 15.62 | 0.00 | 1.945 | 6.71 | 1.24 | 0.9 | 99.1 | 0.0 | 1.87 | 0.73 | 0.75 | 0.85 | 2.08 | 10161 | 1277 | 7 | 0 | 4 | 4 | 0 | logfile |
✔ | 6ZHX | 11220 | 2022-12-12 | 2020-06-24 | 2.5 | 3.01 | 2.20 | 2.7 | 0.005 | 0.92 | 0.0 | 0.06 | 26.86 | 0.01 | 2.203 | 2.72 | 0.46 | 1.0 | 99.0 | 0.0 | 0.63 | 0.88 | 0.90 | 5.80 | 2.7 | 0.005 | 0.59 | 0.0 | 0.03 | 28.61 | 0.00 | 2.138 | 5.45 | 1.38 | 0.9 | 99.1 | 0.0 | 2.81 | 0.45 | 0.89 | 0.92 | 4.64 | 12313 | 784 | 22 | 290 | 0 | 146 | 0 | logfile |
✔ | 6L3T | 0825 | 2022-12-14 | 2019-10-15 | 2.34 | 2.41 | 2.27 | 2.4 | 0.010 | 1.07 | 0.0 | 0.05 | 15.75 | 0.01 | 2.306 | 1.05 | 3.61 | 1.0 | 99.0 | 0.0 | -3.24 | 0.68 | 0.86 | 4.85 | 2.4 | 0.002 | 0.57 | 0.0 | 0.03 | 16.41 | 0.00 | 1.970 | 2.24 | 1.31 | 0.9 | 99.1 | 0.0 | 2.90 | 1.62 | 0.67 | 0.87 | 4.25 | 19722 | 1206 | 18 | 0 | 6 | 204 | 9588 | logfile |
✔ | 7o0U | 12679 | 2022-12-11 | 2021-03-27 | 2.35 | 2.42 | — | 2.3 | 0.017 | 4.33 | 0.0 | 0.05 | 22.25 | 0.01 | 2.121 | 2.09 | 0.41 | 1.2 | 98.8 | 0.0 | 1.39 | 0.83 | 0.86 | 5.52 | 2.3 | 0.003 | 1.71 | 0.0 | 0.03 | 20.54 | 0.00 | 1.837 | 7.07 | 1.12 | 0.9 | 99.1 | 0.0 | 4.04 | 0.50 | 0.84 | 0.89 | 4.10 | 55758 | 4972 | 236 | 0 | 320 | 491 | 0 | logfile |
✔ | 7oFH | 12874 | 2022-12-15 | 2021-05-05 | 2.7 | 2.70 | — | 2.7 | 0.010 | 1.60 | 31.0 | 0.11 | 16.73 | 0.01 | 2.236 | 13.88 | 3.90 | 12.3 | 87.6 | 0.1 | -4.46 | 0.71 | 0.83 | 1.69 | 2.7 | 0.003 | 0.66 | 0.0 | 0.05 | 17.79 | 0.00 | 2.185 | 5.05 | 2.44 | 0.9 | 99.1 | 0.0 | -0.23 | 1.34 | 0.74 | 0.85 | 2.20 | 27135 | 3465 | 30 | 0 | 30 | 0 | 0 | logfile |
✔ | 7WKS | 32568 | 2022-12-11 | 2022-01-11 | 3.0 | 2.57 | — | 3.0 | 0.002 | 0.54 | 0.0 | 0.04 | 13.07 | 0.00 | 2.162 | 7.24 | 0.00 | 1.1 | 98.9 | 0.0 | 1.77 | 0.60 | 0.81 | 2.12 | 3.0 | 0.003 | 0.57 | 0.0 | 0.04 | 16.02 | 0.00 | 2.205 | 8.74 | 0.78 | 0.9 | 99.1 | 0.0 | 1.88 | 0.91 | 0.60 | 0.83 | 1.57 | 5874 | 754 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 7SCA | 25031 | 2022-12-11 | 2021-09-27 | 2.1 | 2.23 | 2.15 | 2.2 | 0.011 | 1.14 | 7.0 | 0.07 | 15.33 | 0.01 | 2.057 | 5.53 | 0.78 | 1.0 | 99.0 | 0.0 | 2.17 | 0.79 | 0.85 | 5.74 | 2.2 | 0.002 | 0.54 | 0.0 | 0.04 | 16.62 | 0.00 | 2.126 | 8.47 | 0.98 | 0.9 | 99.1 | 0.0 | 2.90 | 1.09 | 0.79 | 0.85 | 5.23 | 55437 | 6836 | 116 | 0 | 54 | 1325 | 0 | logfile |
✔ | 7o0V | 12680 | 2022-12-11 | 2021-03-27 | 2.5 | 2.50 | — | 2.4 | 0.017 | 4.34 | 0.0 | 0.05 | 22.36 | 0.01 | 2.117 | 2.10 | 0.31 | 1.2 | 98.8 | 0.0 | 1.63 | 0.82 | 0.86 | 5.41 | 2.4 | 0.006 | 1.84 | 0.0 | 0.04 | 21.46 | 0.00 | 2.030 | 7.90 | 1.48 | 0.9 | 99.1 | 0.0 | 3.36 | 0.49 | 0.84 | 0.89 | 4.38 | 55475 | 4947 | 238 | 0 | 317 | 489 | 0 | logfile |
✔ | 7NK9 | 12434 | 2022-12-14 | 2021-02-17 | 2.9 | 3.29 | — | 3.2 | 0.003 | 0.50 | 0.0 | 0.04 | 13.03 | 0.00 | 2.087 | 6.80 | 0.00 | 2.9 | 97.1 | 0.0 | 1.61 | 0.68 | 0.86 | 1.78 | 3.2 | 0.003 | 0.54 | 0.0 | 0.04 | 15.16 | 0.00 | 2.065 | 6.86 | 0.93 | 0.9 | 99.1 | 0.0 | 4.02 | 0.45 | 0.68 | 0.88 | 1.40 | 18081 | 1225 | 14 | 0 | 0 | 0 | 9158 | logfile |
✔ | 7BES | 12158 | 2022-12-12 | 2020-12-24 | 2.85 | 2.95 | 2.86 | 2.9 | 0.013 | 1.04 | 0.0 | 0.05 | 9.86 | 0.00 | 2.236 | 7.96 | 0.85 | 0.3 | 99.7 | 0.0 | 0.37 | 0.73 | 0.82 | 3.32 | 2.9 | 0.003 | 0.57 | 0.0 | 0.04 | 15.37 | 0.00 | 2.034 | 11.02 | 2.22 | 1.0 | 99.0 | 0.0 | 0.21 | 1.15 | 0.73 | 0.84 | 3.05 | 9446 | 1234 | 12 | 6 | 4 | 0 | 0 | logfile |
✔ | 7QRU | 14124 | 2022-12-13 | 2022-01-12 | 2.24 | 2.32 | 2.24 | 2.4 | 0.020 | 2.18 | 9.0 | 0.10 | 14.53 | 0.02 | 2.058 | 6.88 | 2.50 | 2.6 | 97.4 | 0.1 | -1.62 | 0.79 | 0.91 | 4.88 | 2.4 | 0.004 | 0.60 | 0.0 | 0.04 | 15.70 | 0.00 | 2.160 | 6.29 | 1.37 | 1.0 | 99.0 | 0.0 | 2.18 | 1.15 | 0.79 | 0.90 | 4.12 | 16100 | 1957 | 18 | 0 | 3 | 360 | 0 | logfile |