The table shows a selection of parameters. Activate more columns using
the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 7o0V | 12680 | 2023-04-20 | 2021-03-27 | 2.5 | 2.50 | — | 2.4 | 0.018 | 4.38 | 0.0 | 0.06 | 24.68 | 0.01 | 2.117 | 1.81 | 0.31 | 1.2 | 98.8 | 0.0 | 1.63 | 0.82 | 0.86 | 5.41 | 2.4 | 0.007 | 1.84 | 0.0 | 0.04 | 22.08 | 0.00 | 2.013 | 8.44 | 1.38 | 1.0 | 99.0 | 0.0 | 3.41 | 0.50 | 0.84 | 0.89 | 4.41 | 55475 | 4947 | 238 | 0 | 317 | 489 | 0 | logfile |
✔ | 7MQF | 23945 | 2023-04-26 | 2021-05-05 | 2.88 | 2.74 | 2.86 | 2.8 | 0.006 | 0.72 | 0.0 | 0.06 | 11.73 | 0.00 | 2.175 | 1.01 | 0.00 | 0.5 | 99.5 | 0.0 | 1.24 | 0.72 | 0.87 | 6.16 | 2.7 | 0.003 | 0.48 | 0.0 | 0.04 | 13.43 | 0.00 | 2.255 | 2.60 | 0.00 | 1.0 | 99.0 | 0.0 | 1.00 | 0.44 | 0.78 | 0.91 | 5.71 | 12288 | 1608 | 16 | 16 | 0 | 0 | 0 | logfile |
✔ | 7XNV | 33327 | 2023-04-24 | 2022-04-29 | 3.4 | 3.18 | 3.11 | 3.2 | 0.005 | 1.07 | 0.0 | 0.05 | 16.87 | 0.00 | 2.213 | 7.73 | 0.90 | 1.0 | 98.4 | 0.6 | 0.24 | 0.69 | 0.85 | 2.90 | 3.2 | 0.003 | 0.48 | 0.0 | 0.04 | 16.78 | 0.00 | 2.243 | 5.32 | 0.21 | 1.1 | 98.9 | 0.0 | 2.46 | 0.40 | 0.70 | 0.88 | 2.37 | 18378 | 2088 | 24 | 0 | 114 | 0 | 0 | logfile |
✔ | 6VTL | 21381 | 2023-04-21 | 2020-02-12 | 3.65 | 4.17 | — | 4.0 | 0.004 | 0.80 | 0.0 | 0.05 | 13.92 | 0.01 | 2.306 | 5.90 | 0.00 | 3.4 | 96.6 | 0.0 | -4.96 | 0.68 | 0.72 | 2.51 | 4.0 | 0.003 | 0.66 | 0.0 | 0.04 | 15.47 | 0.00 | 2.188 | 9.73 | 0.49 | 1.1 | 98.9 | 0.0 | -1.28 | 0.52 | 0.71 | 0.77 | 1.87 | 10242 | 1338 | 6 | 0 | 6 | 0 | 0 | logfile |
✔ | 6L3T | 0825 | 2023-04-25 | 2019-10-15 | 2.34 | 2.41 | 2.27 | 2.4 | 0.010 | 1.07 | 0.0 | 0.05 | 15.75 | 0.01 | 2.306 | 1.05 | 3.61 | 1.0 | 99.0 | 0.0 | -3.24 | 0.68 | 0.86 | 4.85 | 2.4 | 0.002 | 0.55 | 0.0 | 0.03 | 16.32 | 0.00 | 1.992 | 2.15 | 1.20 | 1.1 | 98.9 | 0.0 | 3.02 | 1.61 | 0.67 | 0.87 | 4.18 | 19722 | 1206 | 18 | 0 | 6 | 204 | 9588 | logfile |
✔ | 7E27 | 30953 | 2023-04-22 | 2021-02-04 | 2.29 | 2.55 | — | 2.6 | 0.007 | 0.91 | 0.0 | 0.06 | 14.59 | 0.01 | 2.322 | 2.20 | 0.42 | 1.4 | 98.6 | 0.0 | -2.60 | 0.63 | 0.86 | 4.69 | 2.5 | 0.004 | 0.63 | 0.0 | 0.05 | 15.83 | 0.00 | 2.192 | 3.34 | 2.03 | 1.1 | 98.9 | 0.0 | 1.34 | 0.40 | 0.64 | 0.87 | 4.68 | 11475 | 1435 | 15 | 0 | 5 | 90 | 0 | logfile |
✔ | 7SC8 | 25029 | 2023-04-20 | 2021-09-27 | 2.1 | 2.19 | 2.13 | 1.9 | 0.008 | 1.12 | 10.0 | 0.07 | 15.00 | 0.01 | 2.102 | 5.20 | 0.38 | 1.0 | 99.0 | 0.0 | 2.13 | 0.82 | 0.79 | 4.35 | 1.9 | 0.004 | 0.57 | 0.0 | 0.04 | 16.48 | 0.00 | 2.130 | 8.45 | 0.93 | 1.1 | 98.9 | 0.0 | 2.82 | 0.36 | 0.86 | 0.87 | 4.19 | 56784 | 6836 | 116 | 0 | 54 | 2672 | 0 | logfile |
✔ | 8A2Y | 15108 | 2023-04-23 | 2022-06-06 | 2.15 | 2.21 | 2.10 | 2.2 | 0.005 | 0.61 | 0.0 | 0.05 | 13.42 | 0.00 | 2.177 | 2.39 | 0.64 | 1.9 | 98.1 | 0.0 | -1.01 | 0.72 | 0.87 | 6.39 | 2.2 | 0.003 | 0.62 | 0.0 | 0.05 | 15.79 | 0.00 | 2.140 | 4.05 | 0.58 | 1.1 | 98.9 | 0.0 | 0.97 | 0.83 | 0.72 | 0.89 | 6.11 | 15078 | 1835 | 15 | 0 | 15 | 528 | 0 | logfile |
✔ | 8A2T | 15106 | 2023-04-23 | 2022-06-06 | 2.24 | 2.35 | 2.17 | 2.3 | 0.004 | 0.56 | 0.0 | 0.04 | 13.20 | 0.00 | 1.880 | 2.50 | 0.32 | 1.9 | 98.1 | 0.0 | -1.62 | 0.71 | 0.87 | 5.89 | 2.3 | 0.003 | 0.61 | 0.0 | 0.04 | 16.32 | 0.00 | 1.898 | 3.79 | 0.52 | 1.1 | 98.9 | 0.0 | 1.10 | 0.81 | 0.74 | 0.90 | 5.29 | 15046 | 1830 | 15 | 0 | 10 | 556 | 0 | logfile |
✔ | 8EET | 28057 | 2023-04-19 | 2022-09-07 | 3.1 | 3.36 | 3.21 | 3.4 | 0.007 | 0.92 | 0.0 | 0.06 | 12.28 | 0.00 | 0.312 | 9.93 | 1.07 | 0.5 | 99.5 | 0.0 | 1.87 | 0.72 | 0.82 | 3.55 | 3.4 | 0.037 | 2.69 | 0.0 | 0.32 | 14.46 | 0.00 | 0.378 | 13.19 | 0.11 | 1.1 | 98.9 | 0.0 | 2.07 | 1.31 | 0.68 | 0.83 | 2.96 | 107640 | 13260 | 60 | 0 | 120 | 0 | 0 | logfile |
✔ | 8EAS | 27984 | 2023-04-27 | 2022-08-29 | 2.6 | 2.77 | 2.60 | 2.8 | 0.006 | 0.64 | 0.0 | 0.04 | 12.91 | 0.00 | 2.044 | 9.00 | 0.00 | 1.4 | 98.6 | 0.0 | 1.65 | 0.67 | 0.83 | 4.09 | 2.8 | 0.003 | 0.51 | 0.0 | 0.04 | 15.42 | 0.00 | 2.172 | 9.43 | 1.04 | 1.1 | 98.9 | 0.0 | 2.33 | 0.29 | 0.66 | 0.84 | 3.39 | 24802 | 3241 | 18 | 0 | 39 | 0 | 0 | logfile |
✔ | 7PiL | 13441 | 2023-04-26 | 2021-08-20 | 2.5 | 2.21 | — | 2.4 | 0.005 | 0.98 | 0.0 | 0.05 | 16.34 | 0.01 | 2.058 | 1.90 | 0.21 | 1.7 | 98.3 | 0.0 | 1.10 | 0.73 | 0.84 | 5.38 | 2.3 | 0.004 | 0.78 | 0.0 | 0.04 | 17.83 | 0.00 | 1.882 | 6.93 | 1.48 | 1.1 | 98.9 | 0.0 | 2.57 | 1.25 | 0.72 | 0.87 | 4.76 | 22480 | 2291 | 66 | 0 | 73 | 4 | 0 | logfile |
✔ | 6LMW | 0922 | 2023-04-22 | 2019-12-26 | 3.4 | 3.55 | 3.21 | 3.5 | 0.007 | 0.91 | 0.0 | 0.05 | 15.33 | 0.01 | 2.292 | 2.21 | 0.63 | 1.6 | 98.4 | 0.0 | -5.34 | 0.53 | 0.73 | 3.03 | 3.5 | 0.002 | 0.63 | 0.0 | 0.04 | 16.35 | 0.00 | 2.228 | 5.83 | 1.18 | 1.1 | 98.9 | 0.0 | 2.21 | 0.44 | 0.66 | 0.83 | 2.32 | 11624 | 1472 | 8 | 0 | 0 | 0 | 0 | logfile |
✔ | 6NHT | 9373 | 2023-04-27 | 2018-12-23 | 2.9 | 3.26 | 3.11 | 3.3 | 0.006 | 0.75 | 0.0 | 0.04 | 15.21 | 0.00 | 2.394 | 2.27 | 0.45 | 2.1 | 97.9 | 0.0 | -5.86 | 0.68 | 0.85 | 2.73 | 3.3 | 0.002 | 0.53 | 0.0 | 0.04 | 17.62 | 0.00 | 2.177 | 4.32 | 1.45 | 1.1 | 98.9 | 0.0 | 1.65 | 1.58 | 0.59 | 0.81 | 2.59 | 26136 | 3432 | 24 | 0 | 0 | 0 | 0 | logfile |
✔ | 7SQU | 25395 | 2023-04-24 | 2021-11-06 | 2.6 | 3.28 | 2.56 | 3.0 | 0.010 | 0.70 | 0.0 | 0.05 | 15.78 | 0.01 | 2.259 | 1.30 | 1.04 | 2.5 | 97.5 | 0.0 | 1.39 | 0.79 | 0.86 | 3.71 | 3.0 | 0.003 | 0.57 | 0.0 | 0.04 | 16.16 | 0.00 | 2.211 | 5.35 | 0.63 | 1.1 | 98.9 | 0.0 | 1.27 | 0.68 | 0.79 | 0.87 | 2.82 | 17856 | 2292 | 12 | 0 | 0 | 0 | 0 | logfile |
✔ | 7PBU | 13303 | 2023-04-25 | 2021-08-02 | 3.3 | 2.68 | — | 3.4 | 0.005 | 0.82 | 0.0 | 0.05 | 16.25 | 0.01 | 2.364 | 1.82 | 0.00 | 1.1 | 98.9 | 0.0 | 0.22 | 0.60 | 0.76 | 2.90 | 3.3 | 0.004 | 0.60 | 0.0 | 0.04 | 20.21 | 0.00 | 2.133 | 5.72 | 0.45 | 1.1 | 98.9 | 0.0 | 1.09 | 1.85 | 0.61 | 0.79 | 1.50 | 19243 | 1063 | 12 | 68 | 0 | 0 | 9507 | logfile |
✔ | 6ZBH | 11155 | 2023-04-25 | 2020-06-08 | 3.6 | 4.44 | 3.80 | 3.9 | 0.010 | 1.17 | 0.0 | 0.08 | 13.65 | 0.01 | 2.465 | 0.97 | 0.00 | 1.0 | 99.0 | 0.0 | 0.82 | 0.86 | 0.76 | 1.40 | 3.9 | 0.002 | 0.49 | 0.0 | 0.03 | 15.13 | 0.00 | 2.128 | 5.53 | 0.18 | 1.1 | 98.9 | 0.0 | 4.23 | 1.08 | 0.88 | 0.81 | 1.30 | 19523 | 1159 | 4 | 0 | 0 | 0 | 9896 | logfile |
✔ | 6ZBF | 11153 | 2023-04-25 | 2020-06-08 | 3.2 | 3.99 | 3.33 | 3.6 | 0.010 | 1.17 | 0.0 | 0.08 | 13.49 | 0.01 | 2.469 | 1.34 | 0.00 | 0.8 | 99.2 | 0.0 | 0.79 | 0.84 | 0.76 | 1.37 | 3.6 | 0.003 | 0.49 | 0.0 | 0.03 | 15.23 | 0.00 | 1.930 | 5.09 | 0.00 | 1.1 | 98.9 | 0.0 | 4.10 | 2.84 | 0.85 | 0.78 | 1.36 | 19459 | 1156 | 4 | 0 | 0 | 0 | 9861 | logfile |
✔ | 7D0i | 30535 | 2023-04-26 | 2020-09-10 | 3.0 | 2.89 | 2.95 | 3.1 | 0.011 | 0.95 | 0.0 | 0.05 | 14.32 | 0.00 | 2.237 | 5.55 | 2.60 | 2.6 | 97.4 | 0.0 | -2.14 | 0.69 | 0.81 | 2.98 | 3.0 | 0.003 | 0.61 | 0.0 | 0.04 | 16.41 | 0.00 | 2.212 | 6.47 | 2.60 | 1.1 | 98.9 | 0.0 | 1.64 | 1.41 | 0.70 | 0.84 | 2.76 | 22164 | 2544 | 12 | 0 | 12 | 0 | 0 | logfile |
✔ | 7MBX | 23749 | 2023-04-20 | 2021-04-01 | 1.95 | 2.56 | 1.94 | 2.4 | 0.005 | 0.88 | 1.0 | 0.06 | 11.68 | 0.01 | 2.287 | 2.16 | 0.45 | 1.5 | 98.5 | 0.0 | -0.11 | 0.72 | 0.86 | 4.55 | 2.3 | 0.002 | 0.58 | 0.0 | 0.04 | 15.32 | 0.00 | 2.208 | 6.37 | 1.00 | 1.1 | 98.9 | 0.0 | 2.02 | 0.52 | 0.71 | 0.87 | 4.44 | 8433 | 1065 | 11 | 0 | 2 | 61 | 0 | logfile |