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Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 7Y5B | 33615 | 2023-11-22 | 2022-06-16 | 4.4 | 4.11 | 4.45 | 4.0 | 0.002 | 0.56 | 0.0 | 0.04 | 14.57 | 0.00 | 1.888 | 7.15 | 0.00 | 2.7 | 97.3 | 0.0 | 1.29 | 0.79 | 0.81 | — | 4.0 | 0.003 | 0.57 | 0.0 | 0.04 | 14.63 | 0.00 | 1.900 | 8.03 | 0.00 | 3.0 | 97.0 | 0.0 | 1.33 | 0.25 | 0.79 | 0.81 | — | 35959 | 4838 | 26 | 0 | 22 | 0 | 0 | logfile |
✔ | 6Mi7 | 9125 | 2023-11-14 | 2018-09-19 | 4.2 | 4.24 | — | 4.2 | 0.006 | 1.19 | 0.0 | 0.06 | 12.42 | 0.01 | 2.053 | 7.37 | 0.38 | 9.3 | 90.7 | 0.0 | -5.97 | 0.58 | 0.80 | — | 4.2 | 0.003 | 0.75 | 0.0 | 0.04 | 13.75 | 0.00 | 2.152 | 9.92 | 0.00 | 6.0 | 94.0 | 0.0 | -2.27 | 1.96 | 0.59 | 0.80 | — | 7285 | 931 | 6 | 0 | 1 | 0 | 0 | logfile |
✔ | 8BGU | 16036 | 2023-11-13 | 2022-10-28 | 4.1 | 5.77 | 3.97 | 4.0 | 0.003 | 0.84 | 0.0 | 0.04 | 16.17 | 0.00 | 2.235 | 4.09 | 0.00 | 5.0 | 95.0 | 0.0 | -2.58 | 0.92 | 0.86 | — | 4.0 | 0.003 | 0.56 | 0.0 | 0.03 | 16.58 | 0.00 | 2.116 | 18.63 | 0.00 | 8.2 | 91.8 | 0.0 | -0.34 | 2.43 | 0.92 | 0.87 | — | 4779 | 447 | 5 | 121 | 1 | 0 | 0 | logfile |
✔ | 8G8B | 29845 | 2023-11-16 | 2023-02-17 | 4.3 | 7.82 | 4.33 | 3.2 | 0.004 | 0.64 | 0.0 | 0.04 | 29.04 | 0.00 | 2.061 | 8.20 | 1.98 | 1.8 | 98.1 | 0.1 | 1.94 | 0.87 | 0.75 | — | 3.2 | 0.005 | 0.68 | 0.0 | 0.04 | 28.83 | 0.00 | 2.167 | 22.64 | 0.00 | 2.8 | 97.2 | 0.0 | 1.33 | 1.93 | 0.90 | 0.81 | — | 14067 | 902 | 11 | 336 | 0 | 0 | 0 | logfile |
✔ | 8HD6 | 34670 | 2023-11-14 | 2022-11-03 | 3.73 | 4.52 | 3.73 | 3.2 | 0.002 | 0.54 | 0.0 | 0.02 | 14.51 | 0.00 | 1.969 | 2.97 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.90 | 0.78 | — | 3.3 | 0.006 | 0.73 | 0.0 | 0.04 | 18.64 | 0.01 | 1.772 | 23.51 | 0.00 | 0.0 | 0.0 | 0.0 | — | 2.31 | 0.91 | 0.82 | — | 8980 | 0 | 1 | 419 | 25 | 0 | 0 | logfile |
✔ | 8B9C | 15924 | 2023-11-16 | 2022-10-05 | 4.6 | 5.42 | 4.24 | 4.9 | 0.006 | 0.80 | 0.0 | 0.05 | 13.25 | 0.01 | 1.941 | 0.64 | 0.51 | 2.1 | 97.9 | 0.0 | 0.52 | 0.78 | 0.63 | — | 4.9 | 0.004 | 0.62 | 0.0 | 0.04 | 13.28 | 0.00 | 1.681 | 12.76 | 0.00 | 5.0 | 95.0 | 0.0 | -0.06 | 2.55 | 0.83 | 0.78 | — | 117985 | 7179 | 26 | 56 | 12 | 0 | 59018 | logfile |
✔ | 7Y5C | 33616 | 2023-11-22 | 2022-06-16 | 4.7 | 4.41 | 4.64 | 4.1 | 0.003 | 0.60 | 0.0 | 0.04 | 14.02 | 0.00 | 1.916 | 9.62 | 0.00 | 2.6 | 97.4 | 0.0 | 1.08 | 0.77 | 0.73 | — | 4.1 | 0.002 | 0.61 | 0.0 | 0.04 | 13.94 | 0.00 | 1.939 | 9.51 | 0.00 | 2.5 | 97.5 | 0.0 | 1.05 | 1.18 | 0.77 | 0.74 | — | 35993 | 4851 | 26 | 0 | 11 | 0 | 0 | logfile |
✔ | 8G88 | 29843 | 2023-11-16 | 2023-02-17 | 4.8 | 7.18 | 4.63 | 3.2 | 0.004 | 0.60 | 0.0 | 0.03 | 28.10 | 0.00 | 2.275 | 7.12 | 0.93 | 1.0 | 99.0 | 0.0 | 1.45 | 0.78 | 0.60 | — | 3.2 | 0.005 | 0.67 | 0.0 | 0.04 | 29.46 | 0.00 | 2.058 | 27.11 | 0.00 | 2.3 | 97.7 | 0.0 | 1.56 | 2.55 | 0.91 | 0.81 | — | 13995 | 891 | 11 | 336 | 0 | 0 | 0 | logfile |
✔ | 7o17 | 12692 | 2023-11-15 | 2021-03-28 | 4.5 | 4.66 | — | 4.2 | 0.007 | 1.22 | 0.0 | 0.07 | 16.51 | 0.01 | 2.089 | 10.97 | 1.09 | 9.8 | 90.2 | 0.0 | -5.33 | 0.78 | 0.83 | — | 4.2 | 0.003 | 0.76 | 0.0 | 0.04 | 14.39 | 0.00 | 1.928 | 23.91 | 0.00 | 8.0 | 92.0 | 0.0 | -1.97 | 0.57 | 0.78 | 0.83 | — | 11679 | 1531 | 7 | 0 | 4 | 0 | 0 | logfile |
✔ | 8DBZ | 27318 | 2023-11-14 | 2022-06-15 | 4.1 | 4.31 | 4.14 | 4.2 | 0.003 | 0.73 | 0.0 | 0.05 | 12.61 | 0.01 | 2.101 | 19.43 | 0.00 | 6.5 | 93.4 | 0.1 | -1.42 | 0.62 | 0.62 | — | 4.2 | 0.004 | 0.79 | 0.0 | 0.05 | 13.06 | 0.01 | 2.080 | 21.68 | 0.00 | 8.3 | 91.6 | 0.1 | -1.72 | 0.63 | 0.64 | 0.65 | — | 7960 | 1184 | 9 | 0 | 0 | 0 | 0 | logfile |
✔ | 8G6K | 29772 | 2023-11-14 | 2023-02-15 | 3.6 | 3.71 | 3.52 | 3.4 | 0.002 | 0.48 | 0.0 | 0.04 | 4.19 | 0.00 | 2.523 | 0.20 | 0.00 | 2.7 | 97.3 | 0.0 | 1.65 | 0.54 | 0.71 | — | 3.5 | 0.003 | 0.60 | 0.0 | 0.04 | 4.50 | 0.00 | 2.284 | 2.64 | 0.00 | 6.7 | 93.3 | 0.0 | 0.05 | 1.47 | 0.54 | 0.74 | — | 9388 | 1379 | 7 | 0 | 0 | 0 | 2576 | logfile |
✔ | 6M5V | 30094 | 2023-11-15 | 2020-03-11 | 4.5 | 4.75 | — | 4.6 | 0.007 | 0.86 | 1.0 | 0.05 | 16.07 | 0.00 | 2.209 | 18.28 | 5.50 | 9.0 | 90.9 | 0.2 | -3.04 | 0.56 | 0.57 | — | 4.6 | 0.003 | 0.77 | 0.0 | 0.04 | 13.66 | 0.00 | 2.149 | 20.95 | 0.00 | 8.3 | 91.7 | 0.0 | -0.40 | 2.40 | 0.63 | 0.74 | — | 10549 | 1359 | 5 | 0 | 5 | 0 | 0 | logfile |
✔ | 7RRA | 24657 | 2023-11-14 | 2021-08-09 | 4.4 | 4.79 | — | 3.5 | 0.003 | 0.59 | 0.0 | 0.04 | 13.75 | 0.00 | 2.261 | 9.42 | 0.00 | 3.0 | 97.0 | 0.0 | 1.98 | 0.62 | 0.57 | — | 3.5 | 0.003 | 0.62 | 0.0 | 0.04 | 13.95 | 0.00 | 2.142 | 14.85 | 0.00 | 4.1 | 95.9 | 0.0 | 1.58 | 1.89 | 0.65 | 0.62 | — | 9608 | 1204 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 5G06 | 3366 | 2023-11-19 | 2016-03-17 | 4.2 | 4.89 | — | 4.7 | 0.036 | 3.53 | 246.0 | 0.21 | 17.03 | 0.03 | 1.189 | 3.05 | 3.01 | 5.9 | 92.3 | 1.9 | -2.39 | 0.66 | 0.46 | — | 4.7 | 0.003 | 0.75 | 0.0 | 0.04 | 14.36 | 0.00 | 2.082 | 17.81 | 0.00 | 4.2 | 95.6 | 0.1 | -0.48 | 1.80 | 0.88 | 0.79 | — | 26794 | 3420 | 11 | 0 | 0 | 0 | 0 | logfile |
✔ | 6oFJ | 20047 | 2023-11-15 | 2019-03-30 | 4.5 | 5.60 | 3.27 | 7.8 | 0.007 | 0.96 | 0.0 | 0.05 | 15.74 | 0.01 | 2.135 | 3.69 | 0.00 | 7.1 | 92.9 | 0.0 | -4.36 | 0.48 | 0.33 | — | 7.8 | 0.002 | 0.58 | 0.0 | 0.04 | 14.03 | 0.00 | 2.002 | 10.00 | 0.00 | 8.7 | 91.3 | 0.0 | -1.93 | 1.22 | 0.56 | 0.54 | — | 10310 | 650 | 2 | 0 | 0 | 0 | 5142 | logfile |
✔ | 8A1T | 15088 | 2023-11-20 | 2022-06-02 | 3.37 | 2.93 | 3.53 | 3.1 | 0.004 | 0.52 | 0.0 | 0.04 | 15.83 | 0.00 | 2.002 | 4.51 | 0.00 | 2.2 | 97.8 | 0.0 | 1.51 | 0.58 | 0.77 | 2.16 | 3.2 | 0.003 | 0.53 | 0.0 | 0.04 | 16.44 | 0.00 | 0.962 | 8.76 | 0.00 | 3.5 | 96.5 | 0.0 | 0.65 | 0.50 | 0.59 | 0.78 | 1.83 | 29507 | 1889 | 11 | 0 | 14 | 0 | 14626 | logfile |
✔ | 7XLT | 33286 | 2023-11-13 | 2022-04-22 | 4.4 | 4.55 | 4.45 | 4.3 | 0.004 | 0.89 | 0.0 | 0.05 | 16.27 | 0.01 | 2.288 | 8.02 | 0.79 | 6.8 | 93.2 | 0.0 | -2.19 | 0.68 | 0.59 | — | 4.3 | 0.005 | 0.81 | 0.0 | 0.04 | 14.19 | 0.01 | 2.037 | 32.09 | 0.00 | 10.8 | 89.2 | 0.0 | -2.87 | 1.77 | 0.75 | 0.73 | — | 4985 | 431 | 4 | 80 | 0 | 0 | 0 | logfile |
✔ | 8D9N | 27267 | 2023-11-14 | 2022-06-10 | 4.4 | 4.74 | 3.88 | 34.0 | 0.003 | 0.60 | 0.0 | 0.04 | 13.21 | 0.00 | 2.107 | 2.77 | 0.38 | 5.8 | 94.2 | 0.0 | -0.81 | 0.28 | -0.07 | — | 20.0 | 0.002 | 0.66 | 0.0 | 0.04 | 13.34 | 0.00 | 2.212 | 4.39 | 0.00 | 4.6 | 95.4 | 0.0 | 0.37 | 0.56 | 0.40 | -0.02 | — | 7186 | 902 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 8A05 | 15048 | 2023-11-13 | 2022-05-26 | 3.4 | 3.47 | 3.11 | 3.5 | 0.002 | 0.43 | 0.0 | 0.05 | 12.67 | 0.00 | 2.328 | 2.02 | 0.00 | 2.2 | 97.8 | 0.0 | 0.42 | 0.37 | 0.84 | 2.71 | 3.5 | 0.003 | 0.47 | 0.0 | 0.05 | 14.61 | 0.00 | 2.266 | 4.03 | 0.00 | 2.2 | 97.8 | 0.0 | 0.40 | 1.25 | 0.36 | 0.85 | 2.71 | 764 | 91 | 2 | 0 | 5 | 0 | 0 | logfile |
✔ | 6QNU | 4609 | 2023-11-14 | 2019-02-12 | 3.8 | 3.99 | — | 3.9 | 0.004 | 0.91 | 0.0 | 0.06 | 13.91 | 0.01 | 2.324 | 3.68 | 0.61 | 10.0 | 90.0 | 0.0 | -4.05 | 0.77 | 0.81 | 2.85 | 3.9 | 0.003 | 0.65 | 0.0 | 0.05 | 15.84 | 0.00 | 2.136 | 10.61 | 0.00 | 7.3 | 92.7 | 0.0 | -2.40 | 1.23 | 0.77 | 0.81 | 2.29 | 7250 | 920 | 5 | 0 | 0 | 0 | 0 | logfile |