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Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 6VH7 | 21200 | 2022-05-12 | 2020-01-09 | 3.8 | 3.84 | — | 4.1 | 0.007 | 1.03 | 0.0 | 0.05 | 15.14 | 0.01 | 2.318 | 28.35 | 2.13 | 12.4 | 87.6 | 0.0 | -4.78 | 0.54 | 0.62 | 2.62 | 4.0 | 0.004 | 0.82 | 0.0 | 0.05 | 16.62 | 0.00 | 2.299 | 12.42 | 0.00 | 10.5 | 89.5 | 0.0 | -4.26 | 3.67 | 0.59 | 0.69 | 2.04 | 4878 | 642 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 7MLZ | 23914 | 2022-05-12 | 2021-04-29 | 3.71 | 4.27 | 3.83 | 3.9 | 0.004 | 0.78 | 0.0 | 0.05 | 12.84 | 0.01 | 2.150 | 18.34 | 0.00 | 17.4 | 82.5 | 0.2 | -4.08 | 0.80 | 0.62 | 1.39 | 3.9 | 0.004 | 0.78 | 0.0 | 0.05 | 15.40 | 0.01 | 2.101 | 18.55 | 0.37 | 17.9 | 82.0 | 0.2 | -4.24 | 0.52 | 0.82 | 0.65 | 1.02 | 4864 | 624 | 4 | 0 | 5 | 0 | 0 | logfile |
✔ | 7Wi6 | 32526 | 2022-05-13 | 2022-01-03 | 3.71 | 4.33 | — | 4.2 | 0.009 | 0.99 | 0.0 | 0.06 | 14.43 | 0.01 | 2.290 | 5.63 | 1.54 | 14.5 | 85.5 | 0.0 | -6.21 | 0.76 | 0.78 | 1.96 | 4.2 | 0.005 | 0.72 | 0.0 | 0.04 | 14.94 | 0.01 | 2.234 | 9.81 | 0.00 | 10.7 | 89.3 | 0.0 | -4.23 | 0.41 | 0.76 | 0.78 | 1.90 | 9696 | 1446 | 4 | 0 | 4 | 0 | 0 | logfile |
✔ | 7U14 | 26277 | 2022-05-12 | 2022-02-19 | 4.5 | 4.22 | — | 4.6 | 0.006 | 0.90 | 0.0 | 0.06 | 18.13 | 0.00 | 2.369 | 21.08 | 6.30 | 10.5 | 89.5 | 0.0 | -3.07 | 0.30 | 0.52 | — | 4.4 | 0.006 | 0.96 | 0.0 | 0.07 | 15.68 | 0.00 | 2.175 | 21.37 | 0.00 | 14.8 | 85.2 | 0.0 | -4.22 | 1.65 | 0.34 | 0.63 | — | 3456 | 405 | 6 | 0 | 12 | 0 | 0 | logfile |
✔ | 7NSL | 12570 | 2022-05-12 | 2021-03-08 | 3.1 | 3.25 | 2.92 | 3.2 | 0.012 | 1.84 | 0.0 | 0.08 | 14.48 | 0.01 | 2.367 | 4.69 | 0.00 | 3.7 | 96.3 | 0.0 | -5.51 | 0.54 | 0.77 | 3.94 | 3.2 | 0.005 | 0.69 | 0.0 | 0.04 | 17.23 | 0.00 | 2.127 | 6.61 | 1.52 | 7.8 | 92.2 | 0.0 | -4.18 | 0.96 | 0.56 | 0.81 | 3.07 | 8323 | 595 | 7 | 0 | 0 | 0 | 4053 | logfile |
✔ | 6NYG | 0543 | 2022-05-14 | 2019-02-11 | 3.9 | 4.55 | — | 3.9 | 0.005 | 0.97 | 0.0 | 0.06 | 10.45 | 0.00 | 2.242 | 9.27 | 0.16 | 14.1 | 85.9 | 0.0 | -4.66 | 0.82 | 0.64 | 0.83 | 3.9 | 0.005 | 0.83 | 0.0 | 0.05 | 13.68 | 0.00 | 2.072 | 28.07 | 0.45 | 18.8 | 81.1 | 0.0 | -4.18 | 0.74 | 0.83 | 0.68 | 1.00 | 68664 | 9000 | 12 | 0 | 0 | 0 | 0 | logfile |
✔ | 3JCD | 6549 | 2022-05-20 | 2015-12-01 | 3.7 | 5.07 | — | 19.0 | 0.006 | 0.83 | 0.0 | 0.04 | 14.69 | 0.00 | 1.289 | 14.69 | 0.02 | 9.6 | 85.8 | 4.5 | -2.43 | 0.34 | 0.04 | 0.30 | 3.4 | 0.007 | 1.25 | 0.0 | 0.06 | 19.90 | 0.01 | 1.449 | 58.45 | 0.37 | 16.4 | 82.3 | 1.3 | -4.16 | 2.42 | 0.69 | 0.40 | 0.16 | 147815 | 5982 | 57 | 4715 | 0 | 0 | 0 | logfile |
✔ | 5Lii | 4053 | 2022-05-12 | 2016-07-14 | 3.8 | 2.99 | — | 3.9 | 0.015 | 2.41 | 6.0 | 0.14 | 12.69 | 0.01 | 1.855 | 43.00 | 1.41 | 16.9 | 81.9 | 1.2 | -6.10 | 0.55 | 0.70 | 3.46 | 3.8 | 0.004 | 0.96 | 0.0 | 0.04 | 16.43 | 0.01 | 2.170 | 13.83 | 1.77 | 16.2 | 83.1 | 0.7 | -4.16 | 0.89 | 0.56 | 0.67 | 1.31 | 3098 | 433 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 7SP1 | 25364 | 2022-05-12 | 2021-11-02 | 3.4 | 3.65 | — | 3.9 | 0.006 | 1.29 | 0.0 | 0.07 | 19.39 | 0.01 | 2.288 | 13.34 | 0.00 | 2.9 | 97.1 | 0.0 | -2.42 | 0.41 | 0.72 | 4.86 | 4.1 | 0.005 | 0.87 | 0.0 | 0.05 | 19.75 | 0.01 | 2.072 | 19.29 | 0.20 | 14.9 | 85.1 | 0.0 | -4.13 | 1.70 | 0.41 | 0.76 | 4.00 | 4343 | 540 | 17 | 20 | 0 | 0 | 0 | logfile |
✔ | 7P6E | 13227 | 2022-05-12 | 2021-07-15 | 3.4 | 3.40 | 3.47 | 4.1 | 0.009 | 0.96 | 0.0 | 0.06 | 8.26 | 0.01 | 2.358 | 3.99 | 0.00 | 5.9 | 94.1 | 0.0 | -4.80 | 0.54 | 0.80 | 4.38 | 4.1 | 0.005 | 0.73 | 0.0 | 0.05 | 13.23 | 0.00 | 2.222 | 11.11 | 0.32 | 7.1 | 92.9 | 0.0 | -4.12 | 2.70 | 0.52 | 0.80 | 4.05 | 8090 | 1050 | 10 | 0 | 0 | 0 | 0 | logfile |
✔ | 5N6W | 3595 | 2022-05-17 | 2017-02-16 | 4.2 | 4.31 | — | 4.2 | 0.001 | 0.36 | 0.0 | 0.04 | 4.92 | 0.00 | 2.309 | 3.73 | 0.00 | 17.7 | 79.7 | 2.6 | -5.61 | 0.44 | 0.27 | — | 4.2 | 0.021 | 1.61 | 1.0 | 0.04 | 10.59 | 0.01 | 1.586 | 23.57 | 0.04 | 11.8 | 87.5 | 0.6 | -4.11 | 1.47 | 0.68 | 0.64 | — | 40752 | 2512 | 16 | 0 | 0 | 0 | 20032 | logfile |
✔ | 5XLP | 6731 | 2022-05-13 | 2017-05-11 | 4.2 | 4.23 | — | 4.2 | 0.009 | 1.36 | 0.0 | 0.06 | 14.75 | 0.01 | 2.194 | 12.48 | 0.57 | 18.2 | 81.4 | 0.5 | -5.53 | 0.62 | 0.58 | — | 4.2 | 0.013 | 1.39 | 0.0 | 0.05 | 16.16 | 0.01 | 1.225 | 26.23 | 0.11 | 16.4 | 83.3 | 0.3 | -4.10 | 2.32 | 0.65 | 0.63 | — | 9952 | 1343 | 6 | 24 | 0 | 0 | 0 | logfile |
✔ | 6Z7Q | 11112 | 2022-05-14 | 2020-06-01 | 3.8 | 4.10 | 3.58 | 4.0 | 0.006 | 0.77 | 0.0 | 0.05 | 14.47 | 0.00 | 2.176 | 21.13 | 0.00 | 28.6 | 70.7 | 0.7 | -6.49 | 0.73 | 0.82 | 1.75 | 4.0 | 0.003 | 0.88 | 0.0 | 0.05 | 16.77 | 0.01 | 2.145 | 17.60 | 0.16 | 14.3 | 85.7 | 0.0 | -4.08 | 1.21 | 0.74 | 0.81 | 0.99 | 16665 | 2080 | 5 | 0 | 0 | 0 | 0 | logfile |
✔ | 7NCi | 12267 | 2022-05-13 | 2021-01-28 | 3.55 | 3.67 | 3.44 | 4.0 | 0.012 | 1.57 | 2.0 | 0.10 | 15.57 | 0.01 | 2.481 | 0.35 | 0.00 | 8.9 | 91.1 | 0.0 | -3.74 | 0.68 | 0.59 | 1.81 | 4.0 | 0.003 | 0.59 | 2.0 | 0.05 | 14.74 | 0.00 | 1.986 | 16.42 | 0.37 | 11.1 | 88.9 | 0.0 | -4.08 | 1.11 | 0.64 | 0.57 | -0.11 | 11292 | 816 | 12 | 0 | 0 | 0 | 5796 | logfile |
✔ | 6EU1 | 3956 | 2022-05-17 | 2017-10-27 | 3.4 | 3.40 | — | 6.6 | 0.005 | 1.13 | 0.0 | 0.06 | 12.93 | 0.01 | 1.732 | 6.56 | 0.50 | 16.1 | 83.5 | 0.4 | -5.70 | 0.20 | 0.01 | 0.29 | 3.3 | 0.013 | 1.36 | 3.0 | 0.05 | 16.40 | 0.01 | 1.726 | 25.40 | 0.21 | 17.8 | 81.9 | 0.3 | -4.08 | 2.02 | 0.48 | 0.41 | 0.16 | 40547 | 5012 | 24 | 43 | 7 | 0 | 0 | logfile |
✔ | 5YYS | 6859 | 2022-05-15 | 2017-12-11 | 4.2 | 4.57 | — | 4.1 | 0.016 | 2.26 | 0.0 | 0.10 | 15.30 | 0.01 | 2.201 | 22.76 | 2.34 | 27.3 | 70.1 | 2.6 | -5.98 | 0.85 | 0.71 | — | 4.1 | 0.004 | 1.31 | 0.0 | 0.06 | 12.64 | 0.01 | 1.988 | 34.20 | 0.00 | 24.3 | 75.2 | 0.5 | -4.07 | 1.67 | 0.88 | 0.76 | — | 24044 | 3244 | 4 | 0 | 0 | 0 | 0 | logfile |
✔ | 7KVE | 23048 | 2022-05-13 | 2020-11-27 | 3.3 | 3.69 | 3.38 | 3.6 | 0.005 | 0.82 | 2.0 | 0.05 | 14.67 | 0.00 | 2.204 | 17.50 | 0.57 | 18.2 | 81.4 | 0.4 | -5.88 | 0.75 | 0.73 | 2.61 | 3.6 | 0.003 | 0.72 | 0.0 | 0.05 | 16.45 | 0.00 | 2.136 | 13.03 | 0.16 | 14.4 | 85.6 | 0.0 | -4.07 | 1.21 | 0.75 | 0.74 | 2.25 | 11142 | 1374 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 7AST | 11904 | 2022-05-16 | 2020-10-28 | 4.0 | 3.84 | — | 3.5 | 0.016 | 1.10 | 1.0 | 0.06 | 15.36 | 0.01 | 1.913 | 32.75 | 0.00 | 20.8 | 78.6 | 0.6 | -4.78 | 0.61 | 0.46 | — | 3.6 | 0.018 | 1.20 | 1.0 | 0.05 | 17.51 | 0.01 | 1.897 | 36.36 | 0.05 | 18.8 | 80.8 | 0.5 | -4.06 | 2.28 | 0.64 | 0.50 | — | 34518 | 4365 | 17 | 0 | 36 | 0 | 0 | logfile |
✔ | 6H6B | 0148 | 2022-05-12 | 2018-07-26 | 3.4 | 3.13 | — | 3.5 | 0.008 | 1.10 | 0.0 | 0.20 | 8.13 | 0.00 | 2.530 | 5.82 | 0.00 | 14.3 | 85.7 | 0.0 | -4.80 | 0.44 | 0.74 | 5.60 | 3.2 | 0.005 | 0.91 | 0.0 | 0.18 | 11.69 | 0.00 | 2.137 | 6.56 | 0.50 | 19.6 | 80.4 | 0.0 | -4.04 | 1.83 | 0.42 | 0.78 | 3.27 | 8060 | 580 | 10 | 0 | 0 | 0 | 4100 | logfile |
✔ | 7o7L | 12747 | 2022-05-17 | 2021-04-13 | 4.5 | 5.42 | — | 6.7 | 0.007 | 1.15 | 8.0 | 0.08 | 16.00 | 0.02 | 2.027 | 13.50 | 0.49 | 16.8 | 82.5 | 0.7 | -5.47 | 0.80 | 0.63 | — | 6.6 | 0.004 | 0.91 | 0.0 | 0.05 | 14.75 | 0.01 | 2.014 | 29.53 | 0.04 | 15.6 | 84.3 | 0.2 | -4.03 | 1.54 | 0.82 | 0.69 | — | 44614 | 5640 | 14 | 0 | 44 | 0 | 0 | logfile |