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Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 6ZRR | 11383 | 2024-03-10 | 2020-07-14 | 4.0 | 4.04 | 3.78 | 4.3 | 0.015 | 1.45 | 0.0 | 0.06 | 14.32 | 0.00 | 2.189 | 28.46 | 0.00 | 5.0 | 95.0 | 0.0 | -4.56 | 0.62 | 0.69 | — | 4.3 | 0.003 | 0.70 | 0.0 | 0.05 | 14.85 | 0.00 | 2.088 | 31.94 | 0.62 | 16.4 | 83.6 | 0.0 | -4.75 | 1.53 | 0.64 | 0.74 | — | 5724 | 414 | 18 | 0 | 0 | 0 | 2664 | logfile |
✔ | 7KXY | 23067 | 2024-03-14 | 2020-12-05 | 4.4 | 4.55 | 4.44 | 4.5 | 0.004 | 0.82 | 0.0 | 0.05 | 15.13 | 0.01 | 2.197 | 19.28 | 7.18 | 26.0 | 69.8 | 4.2 | -5.90 | 0.63 | 0.60 | — | 4.5 | 0.004 | 0.83 | 0.0 | 0.05 | 14.57 | 0.01 | 2.058 | 24.98 | 0.00 | 17.3 | 82.7 | 0.1 | -4.74 | 0.61 | 0.63 | 0.61 | — | 9510 | 1181 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 6SST | 10305 | 2024-03-10 | 2019-09-09 | 3.4 | 3.46 | — | 3.4 | 0.009 | 0.94 | 0.0 | 0.07 | 16.79 | 0.00 | 2.430 | 5.73 | 2.13 | 10.1 | 89.9 | 0.0 | -4.47 | 0.56 | 0.80 | 6.33 | 3.4 | 0.004 | 0.65 | 0.0 | 0.05 | 15.47 | 0.00 | 2.326 | 9.86 | 3.40 | 10.6 | 89.4 | 0.0 | -4.74 | 0.40 | 0.59 | 0.84 | 5.33 | 4900 | 730 | 10 | 0 | 0 | 0 | 0 | logfile |
✔ | 7oZG | 13123 | 2024-03-10 | 2021-06-28 | 3.3 | 3.21 | 2.71 | 3.6 | 0.023 | 1.83 | 0.0 | 0.10 | 12.75 | 0.01 | 2.254 | 17.09 | 0.00 | 8.7 | 91.3 | 0.0 | -4.01 | 0.40 | 0.73 | 3.72 | 3.7 | 0.006 | 0.82 | 0.0 | 0.05 | 15.66 | 0.00 | 2.270 | 17.98 | 10.82 | 17.5 | 82.5 | 0.0 | -4.72 | 1.62 | 0.35 | 0.69 | 4.53 | 4960 | 730 | 10 | 0 | 0 | 0 | 0 | logfile |
✔ | 6CU7 | 7618 | 2024-03-10 | 2018-03-23 | 3.5 | 3.63 | — | 4.3 | 0.007 | 0.99 | 0.0 | 0.07 | 9.61 | 0.00 | 2.346 | 4.58 | 2.38 | 15.5 | 84.5 | 0.0 | -4.74 | 0.38 | 0.72 | 2.52 | 4.3 | 0.005 | 0.75 | 0.0 | 0.05 | 14.53 | 0.00 | 2.172 | 17.96 | 6.19 | 14.8 | 85.2 | 0.0 | -4.71 | 1.75 | 0.38 | 0.73 | 1.70 | 4140 | 600 | 10 | 0 | 0 | 0 | 0 | logfile |
✔ | 7NCH | 12266 | 2024-03-15 | 2021-01-28 | 3.84 | 3.76 | 3.69 | 3.8 | 0.013 | 1.61 | 2.0 | 0.10 | 14.68 | 0.00 | 2.485 | 0.00 | 0.19 | 9.4 | 90.6 | 0.0 | -3.70 | 0.60 | 0.45 | 2.36 | 3.8 | 0.004 | 0.75 | 2.0 | 0.05 | 15.90 | 0.00 | 1.890 | 15.09 | 2.59 | 14.8 | 85.2 | 0.0 | -4.71 | 1.67 | 0.65 | 0.54 | 2.02 | 11292 | 816 | 12 | 0 | 0 | 0 | 5796 | logfile |
✔ | 8AZ3 | 15731 | 2024-03-10 | 2022-09-05 | 3.4 | 2.64 | 3.43 | 3.6 | 0.005 | 0.66 | 0.0 | 0.06 | 9.60 | 0.00 | 2.509 | 6.87 | 0.00 | 0.0 | 100.0 | 0.0 | -2.88 | 0.47 | 0.83 | 5.76 | 3.6 | 0.007 | 0.70 | 0.0 | 0.05 | 12.42 | 0.00 | 2.196 | 5.22 | 1.59 | 9.0 | 91.0 | 0.0 | -4.69 | 0.61 | 0.49 | 0.86 | 6.00 | 4040 | 540 | 20 | 0 | 20 | 0 | 0 | logfile |
✔ | 8CPE | 16780 | 2024-03-10 | 2023-03-02 | 4.0 | 3.90 | 2.90 | 4.2 | 0.002 | 0.93 | 0.0 | 0.06 | 12.17 | 0.00 | 2.224 | 3.26 | 0.00 | 4.1 | 95.9 | 0.0 | -3.80 | 0.54 | 0.71 | — | 4.3 | 0.005 | 1.36 | 0.0 | 0.05 | 13.91 | 0.01 | 2.170 | 8.34 | 2.42 | 10.7 | 89.3 | 0.0 | -4.69 | 1.89 | 0.54 | 0.72 | — | 5520 | 385 | 5 | 0 | 0 | 0 | 2615 | logfile |
✔ | 6ZD0 | 11172 | 2024-03-11 | 2020-06-13 | 4.6 | 4.62 | 2.80 | 3.7 | 0.004 | 0.91 | 0.0 | 0.05 | 7.55 | 0.00 | 2.207 | 10.05 | 0.00 | 10.1 | 89.8 | 0.1 | -4.73 | 0.59 | 0.58 | — | 4.5 | 0.003 | 0.78 | 0.0 | 0.04 | 5.38 | 0.00 | 2.341 | 5.89 | 0.00 | 15.0 | 84.6 | 0.4 | -4.68 | 2.32 | 0.61 | 0.58 | — | 7962 | 1611 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 6NYL | 0545 | 2024-03-15 | 2019-02-11 | 3.7 | 4.50 | — | 4.1 | 0.008 | 1.14 | 0.0 | 0.06 | 11.10 | 0.01 | 2.233 | 10.38 | 0.97 | 16.1 | 83.9 | 0.0 | -5.60 | 0.87 | 0.74 | 2.26 | 4.1 | 0.004 | 0.73 | 0.0 | 0.05 | 13.05 | 0.00 | 2.128 | 22.48 | 3.12 | 17.4 | 82.6 | 0.0 | -4.67 | 0.51 | 0.87 | 0.74 | 1.72 | 68664 | 9000 | 12 | 0 | 0 | 0 | 0 | logfile |
✔ | 6UUR | 20900 | 2024-03-10 | 2019-10-31 | 3.5 | 3.51 | — | 3.6 | 0.004 | 0.76 | 0.0 | 0.05 | 15.65 | 0.00 | 2.644 | 8.15 | 0.00 | 5.3 | 94.7 | 0.0 | -4.46 | 0.56 | 0.78 | 3.10 | 3.7 | 0.007 | 0.98 | 0.0 | 0.05 | 16.85 | 0.00 | 2.164 | 13.77 | 6.80 | 11.8 | 88.2 | 0.0 | -4.62 | 2.21 | 0.52 | 0.80 | 3.03 | 2770 | 400 | 10 | 0 | 0 | 0 | 0 | logfile |
✔ | 7M62 | 23687 | 2024-03-10 | 2021-03-25 | 3.9 | 3.91 | — | 4.3 | 0.007 | 1.13 | 0.0 | 0.07 | 14.83 | 0.00 | 2.321 | 32.83 | 0.00 | 23.3 | 76.7 | 0.0 | -4.97 | 0.55 | 0.62 | 2.27 | 4.2 | 0.003 | 0.88 | 0.0 | 0.05 | 16.43 | 0.00 | 2.174 | 23.11 | 7.04 | 19.0 | 81.0 | 0.0 | -4.61 | 2.78 | 0.57 | 0.66 | 2.74 | 2380 | 320 | 10 | 0 | 10 | 0 | 0 | logfile |
✔ | 7V48 | 31703 | 2024-03-10 | 2021-08-12 | 3.0 | 2.27 | — | 3.3 | 0.002 | 0.48 | 0.0 | 0.05 | 12.91 | 0.00 | 2.295 | 8.64 | 0.00 | 9.8 | 90.2 | 0.0 | -5.61 | 0.37 | 0.75 | 4.10 | 3.3 | 0.004 | 0.65 | 0.0 | 0.05 | 14.15 | 0.00 | 2.253 | 4.89 | 2.65 | 21.3 | 78.7 | 0.0 | -4.60 | 0.41 | 0.39 | 0.76 | 4.74 | 2598 | 378 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 7M61 | 23686 | 2024-03-10 | 2021-03-25 | 3.8 | 3.83 | — | 4.1 | 0.005 | 1.01 | 0.0 | 0.08 | 12.79 | 0.00 | 2.218 | 22.02 | 0.00 | 14.3 | 85.7 | 0.0 | -4.63 | 0.49 | 0.73 | 2.45 | 4.1 | 0.004 | 0.80 | 0.0 | 0.05 | 15.29 | 0.00 | 2.095 | 26.36 | 7.69 | 15.2 | 84.8 | 0.0 | -4.59 | 0.73 | 0.49 | 0.75 | 2.45 | 1690 | 230 | 10 | 0 | 10 | 0 | 0 | logfile |
✔ | 7YRR | 34065 | 2024-03-19 | 2022-08-10 | 4.3 | 4.40 | 4.25 | 4.2 | 0.013 | 2.13 | 5.0 | 0.11 | 22.39 | 0.01 | 1.874 | 15.92 | 26.25 | 21.4 | 73.0 | 5.6 | -5.95 | 0.67 | 0.46 | — | 4.2 | 0.014 | 0.93 | 0.0 | 0.04 | 14.50 | 0.01 | 1.870 | 36.32 | 0.13 | 18.5 | 80.8 | 0.7 | -4.57 | 1.26 | 0.70 | 0.53 | — | 24937 | 1697 | 4 | 0 | 0 | 0 | 11408 | logfile |
✔ | 8QXA | 18716 | 2024-03-10 | 2023-10-24 | 4.05 | 3.51 | 3.78 | 4.2 | 0.014 | 2.24 | 0.0 | 0.10 | 18.94 | 0.01 | 2.420 | 4.19 | 0.00 | 3.5 | 96.5 | 0.0 | -4.36 | 0.51 | 0.75 | — | 4.2 | 0.004 | 0.84 | 0.0 | 0.04 | 14.57 | 0.00 | 2.342 | 19.02 | 0.00 | 9.1 | 90.9 | 0.0 | -4.56 | 1.51 | 0.49 | 0.75 | — | 3696 | 540 | 12 | 0 | 0 | 0 | 0 | logfile |
✔ | 7YNT | 33971 | 2024-03-10 | 2022-07-31 | 3.1 | 2.98 | 2.27 | 4.1 | 0.004 | 0.59 | 0.0 | 0.06 | 11.35 | 0.00 | 2.275 | 13.34 | 0.00 | 8.9 | 91.1 | 0.0 | -5.55 | 0.42 | 0.70 | 4.17 | 4.1 | 0.004 | 0.67 | 0.0 | 0.06 | 13.80 | 0.00 | 2.244 | 11.90 | 1.25 | 14.9 | 85.1 | 0.0 | -4.55 | 0.45 | 0.36 | 0.64 | 3.22 | 2364 | 348 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 7N9Q | 24259 | 2024-03-11 | 2021-06-18 | 4.6 | 4.92 | — | 2.3 | 0.002 | 0.88 | 0.0 | 0.00 | 5.65 | 0.00 | 2.600 | 0.00 | 0.00 | 8.9 | 90.3 | 0.8 | -1.59 | 0.79 | 0.69 | — | 2.5 | 0.003 | 1.00 | 0.0 | 0.00 | 5.05 | 0.00 | 2.580 | 6.76 | 0.00 | 12.3 | 86.7 | 0.9 | -4.51 | 2.40 | 0.85 | 0.81 | — | 6945 | 2315 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 5ZLU | 6934 | 2024-03-27 | 2018-03-29 | 3.6 | 3.66 | — | 3.6 | 0.008 | 1.26 | 2.0 | 0.07 | 24.87 | 0.01 | 0.401 | 13.10 | 2.52 | 18.9 | 79.1 | 1.9 | -5.90 | 0.78 | 0.77 | 1.74 | 3.6 | 0.004 | 0.84 | 1.0 | 0.04 | 24.65 | 0.01 | 2.059 | 12.70 | 6.90 | 19.8 | 79.4 | 0.7 | -4.50 | 0.55 | 0.78 | 0.78 | 0.91 | 150313 | 6529 | 60 | 4596 | 4 | 0 | 0 | logfile |
✔ | 6DSo | 8910 | 2024-03-11 | 2018-06-14 | 3.0 | 3.30 | 2.98 | 3.4 | 0.009 | 0.94 | 0.0 | 0.06 | 7.35 | 0.00 | 2.431 | 1.53 | 0.00 | 3.2 | 96.8 | 0.0 | -4.46 | 0.49 | 0.81 | 6.10 | 3.4 | 0.006 | 0.66 | 0.0 | 0.04 | 14.79 | 0.00 | 2.153 | 9.25 | 1.91 | 9.0 | 91.0 | 0.0 | -4.49 | 0.63 | 0.50 | 0.83 | 5.42 | 6588 | 828 | 12 | 0 | 0 | 0 | 0 | logfile |