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Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 6A91 | 6996 | 2024-03-15 | 2018-07-11 | 3.2 | 3.32 | — | 3.3 | 0.009 | 1.14 | 0.0 | 0.06 | 13.00 | 0.01 | 2.238 | 6.00 | 1.22 | 7.8 | 91.6 | 0.6 | -6.38 | 0.60 | 0.82 | 4.21 | 3.3 | 0.002 | 0.63 | 0.0 | 0.04 | 15.65 | 0.00 | 2.163 | 5.19 | 2.18 | 7.1 | 92.8 | 0.1 | -0.92 | 0.71 | 0.65 | 0.86 | 2.56 | 11182 | 1380 | 6 | 0 | 10 | 3 | 0 | logfile |
✔ | 5TJ5 | 8409 | 2024-03-16 | 2016-10-03 | 3.9 | 4.19 | — | 4.1 | 0.010 | 1.29 | 0.0 | 0.05 | 9.13 | 0.01 | 1.040 | 27.77 | 0.12 | 14.4 | 85.2 | 0.4 | -6.37 | 0.62 | 0.69 | 1.87 | 4.1 | 0.004 | 0.88 | 0.0 | 0.04 | 12.88 | 0.00 | 2.060 | 14.90 | 4.28 | 6.1 | 93.7 | 0.2 | 0.47 | 1.76 | 0.63 | 0.74 | 1.25 | 14976 | 2102 | 14 | 0 | 365 | 0 | 0 | logfile |
✔ | 5LiJ | 4054 | 2024-03-10 | 2016-07-14 | 4.2 | 3.63 | — | 4.2 | 0.009 | 2.92 | 4.0 | 0.17 | 15.82 | 0.01 | 2.249 | 25.64 | 0.00 | 10.7 | 89.3 | 0.0 | -6.36 | 0.85 | 0.76 | — | 3.8 | 0.005 | 1.17 | 0.0 | 0.04 | 10.44 | 0.00 | 2.149 | 15.78 | 0.00 | 35.3 | 64.7 | 0.0 | -5.53 | 1.48 | 0.86 | 0.78 | — | 761 | 152 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 6M23 | 30061 | 2024-03-16 | 2020-02-26 | 3.2 | 3.49 | — | 3.3 | 0.010 | 1.12 | 0.0 | 0.07 | 14.89 | 0.01 | 2.216 | 8.07 | 2.32 | 10.7 | 87.8 | 1.5 | -6.36 | 0.68 | 0.79 | 2.75 | 3.4 | 0.003 | 0.76 | 0.0 | 0.04 | 15.59 | 0.00 | 2.147 | 8.72 | 2.70 | 10.1 | 89.4 | 0.4 | -1.58 | 0.77 | 0.67 | 0.83 | 2.20 | 14744 | 1872 | 12 | 0 | 18 | 2 | 0 | logfile |
✔ | 6MUP | 9251 | 2024-03-16 | 2018-10-23 | 3.5 | 3.90 | — | 3.8 | 0.013 | 1.19 | 1.0 | 0.06 | 25.82 | 0.01 | 1.379 | 7.59 | 1.08 | 10.3 | 89.2 | 0.5 | -6.36 | 0.61 | 0.61 | 2.67 | 3.8 | 0.004 | 0.66 | 0.0 | 0.04 | 26.52 | 0.00 | 2.116 | 12.47 | 1.96 | 8.4 | 91.6 | 0.0 | -1.99 | 0.72 | 0.75 | 0.79 | 1.54 | 15803 | 1224 | 14 | 294 | 0 | 0 | 0 | logfile |
✔ | 6YKR | 10830 | 2024-03-15 | 2020-04-06 | 3.0 | 3.10 | 2.86 | 3.1 | 0.004 | 0.84 | 0.0 | 0.05 | 9.41 | 0.01 | 2.314 | 2.33 | 0.00 | 2.6 | 97.4 | 0.0 | -6.35 | 0.66 | 0.85 | 5.11 | 3.1 | 0.003 | 0.67 | 0.0 | 0.04 | 15.92 | 0.00 | 2.257 | 7.62 | 1.94 | 2.4 | 97.6 | 0.0 | 0.82 | 1.14 | 0.67 | 0.88 | 3.43 | 10189 | 1326 | 9 | 0 | 0 | 6 | 0 | logfile |
✔ | 6LR0 | 31583 | 2024-03-14 | 2020-01-15 | 3.5 | 3.87 | — | 3.8 | 0.011 | 1.38 | 0.0 | 0.07 | 13.07 | 0.01 | 2.291 | 5.77 | 0.88 | 11.0 | 88.9 | 0.1 | -6.35 | 0.66 | 0.78 | 1.71 | 3.8 | 0.003 | 0.73 | 0.0 | 0.04 | 15.67 | 0.00 | 2.193 | 9.36 | 2.92 | 7.3 | 92.7 | 0.0 | -3.73 | 0.80 | 0.63 | 0.75 | 0.81 | 9576 | 1230 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 6WUN | 21917 | 2024-03-14 | 2020-05-04 | 3.9 | 4.00 | — | 3.9 | 0.005 | 0.80 | 0.0 | 0.05 | 13.70 | 0.00 | 2.166 | 14.26 | 1.14 | 18.4 | 81.6 | 0.0 | -6.35 | 0.68 | 0.80 | 1.75 | 3.9 | 0.003 | 0.74 | 0.0 | 0.04 | 15.02 | 0.00 | 2.128 | 10.83 | 1.52 | 15.5 | 84.5 | 0.0 | -3.72 | 0.53 | 0.68 | 0.79 | 1.62 | 10082 | 1326 | 4 | 0 | 0 | 0 | 0 | logfile |
✘ | 6NEF | 9357 | 2024-03-21 | 2018-12-17 | 3.4 | 3.55 | — | 3.5 | 0.021 | 1.83 | 0.0 | 0.07 | 16.56 | 0.01 | 1.696 | 41.21 | 0.04 | 24.1 | 72.2 | 3.7 | -6.35 | 0.42 | 0.36 | 0.87 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 29457 | 3663 | 9 | 0 | 63 | 0 | 0 | logfile |
✔ | 6V7B | 21094 | 2024-03-11 | 2019-12-08 | 3.4 | 3.51 | — | 3.4 | 0.008 | 0.84 | 0.0 | 0.05 | 18.33 | 0.01 | 2.234 | 4.03 | 0.11 | 3.1 | 96.9 | 0.0 | -6.34 | 0.58 | 0.88 | 2.82 | 3.4 | 0.004 | 0.66 | 0.0 | 0.04 | 18.76 | 0.00 | 1.965 | 10.90 | 4.74 | 3.4 | 96.6 | 0.0 | 1.74 | 1.54 | 0.58 | 0.89 | 2.11 | 58277 | 5635 | 48 | 646 | 0 | 0 | 0 | logfile |
✔ | 7CAL | 30334 | 2024-03-16 | 2020-06-09 | 3.2 | 3.36 | — | 3.3 | 0.007 | 1.09 | 0.0 | 0.06 | 14.99 | 0.01 | 2.265 | 2.29 | 0.00 | 14.0 | 85.7 | 0.2 | -6.34 | 0.71 | 0.82 | 3.61 | 3.3 | 0.005 | 0.76 | 0.0 | 0.05 | 15.97 | 0.00 | 2.244 | 6.79 | 4.15 | 12.0 | 87.8 | 0.2 | -2.20 | 1.50 | 0.71 | 0.82 | 2.34 | 14064 | 1776 | 8 | 0 | 4 | 0 | 0 | logfile |
✔ | 6oVH | 20212 | 2024-03-15 | 2019-05-07 | 2.6 | 2.81 | 2.71 | 2.8 | 0.014 | 1.10 | 0.0 | 0.04 | 17.48 | 0.01 | 1.203 | 1.15 | 4.55 | 1.0 | 99.0 | 0.0 | -6.34 | 0.75 | 0.87 | 4.63 | 2.8 | 0.003 | 0.78 | 0.0 | 0.04 | 18.70 | 0.00 | 2.009 | 2.73 | 0.95 | 1.0 | 99.0 | 0.0 | 1.67 | 0.97 | 0.77 | 0.89 | 3.79 | 10895 | 1272 | 36 | 0 | 68 | 171 | 0 | logfile |
✔ | 8i38 | 35145 | 2024-03-11 | 2023-01-16 | 2.9 | 3.23 | 3.01 | 3.2 | 0.006 | 1.20 | 4.0 | 0.07 | 12.79 | 0.01 | 1.981 | 16.41 | 0.00 | 8.8 | 91.0 | 0.2 | -6.34 | 0.49 | 0.71 | 2.72 | 3.2 | 0.004 | 0.71 | 0.0 | 0.04 | 15.33 | 0.00 | 2.203 | 7.33 | 2.15 | 7.4 | 92.4 | 0.2 | -1.33 | 1.15 | 0.48 | 0.72 | 2.09 | 8122 | 1042 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 7YKR | 33895 | 2024-03-22 | 2022-07-23 | 3.2 | 3.70 | 3.34 | 4.7 | 0.008 | 1.02 | 8.0 | 0.06 | 10.92 | 0.01 | 2.215 | 4.01 | 0.83 | 9.3 | 90.7 | 0.0 | -6.34 | 0.34 | 0.19 | 0.00 | 3.6 | 0.003 | 0.71 | 0.0 | 0.04 | 15.79 | 0.00 | 2.204 | 9.30 | 1.34 | 7.2 | 92.8 | 0.0 | -0.59 | 2.74 | 0.62 | 0.76 | 1.77 | 31924 | 4140 | 4 | 0 | 0 | 0 | 0 | logfile |
✔ | 7SHM | 25130 | 2024-03-14 | 2021-10-09 | 3.14 | 3.35 | — | 3.4 | 0.006 | 1.17 | 3.0 | 0.06 | 15.73 | 0.01 | 2.322 | 5.09 | 0.21 | 3.0 | 97.0 | 0.0 | -6.33 | 0.64 | 0.82 | 2.64 | 3.4 | 0.003 | 0.65 | 0.0 | 0.04 | 16.95 | 0.00 | 2.169 | 9.00 | 2.08 | 3.8 | 96.2 | 0.0 | 0.19 | 0.61 | 0.62 | 0.84 | 2.50 | 9186 | 1142 | 4 | 0 | 2 | 0 | 0 | logfile |
✔ | 6o6A | 0631 | 2024-03-20 | 2019-03-05 | 3.6 | 3.69 | — | 3.6 | 0.008 | 0.99 | 0.0 | 0.06 | 15.68 | 0.01 | 1.986 | 6.42 | 0.00 | 7.4 | 92.6 | 0.0 | -6.33 | 0.60 | 0.77 | 2.17 | 3.6 | 0.005 | 1.07 | 4.0 | 0.07 | 17.43 | 0.00 | 1.914 | 14.37 | 3.28 | 7.1 | 92.8 | 0.1 | -0.82 | 2.50 | 0.61 | 0.78 | 1.33 | 27220 | 3312 | 8 | 0 | 8 | 0 | 0 | logfile |
✔ | 7K7K | 22701 | 2024-03-23 | 2020-09-23 | 3.56 | 3.71 | — | 3.7 | 0.009 | 0.92 | 0.0 | 0.05 | 15.87 | 0.01 | 1.827 | 16.18 | 1.39 | 7.7 | 92.3 | 0.0 | -6.33 | 0.54 | 0.86 | 1.36 | 3.7 | 0.005 | 0.91 | 2.0 | 0.04 | 19.02 | 0.00 | 2.002 | 13.65 | 4.27 | 6.8 | 93.2 | 0.0 | 1.33 | 2.59 | 0.53 | 0.85 | 1.07 | 36204 | 4788 | 28 | 0 | 0 | 0 | 0 | logfile |
✔ | 6TD6 | 10464 | 2024-03-16 | 2019-11-07 | 4.76 | 5.03 | — | 4.8 | 0.010 | 1.11 | 0.0 | 0.07 | 17.68 | 0.01 | 1.777 | 55.96 | 0.35 | 22.8 | 76.8 | 0.4 | -6.33 | 0.62 | 0.70 | — | 4.8 | 0.003 | 0.65 | 0.0 | 0.04 | 14.09 | 0.00 | 1.940 | 16.36 | 0.00 | 9.3 | 90.7 | 0.0 | -1.10 | 1.42 | 0.59 | 0.68 | — | 15680 | 982 | 4 | 0 | 3 | 0 | 7766 | logfile |
✔ | 7DHR | 30682 | 2024-03-11 | 2020-11-17 | 3.8 | 3.96 | — | 3.9 | 0.004 | 0.86 | 0.0 | 0.05 | 14.29 | 0.01 | 2.329 | 3.92 | 0.31 | 9.1 | 90.8 | 0.1 | -6.33 | 0.70 | 0.77 | 3.13 | 3.9 | 0.002 | 0.61 | 0.0 | 0.04 | 15.43 | 0.00 | 2.232 | 9.54 | 3.08 | 6.7 | 93.3 | 0.0 | -3.43 | 0.43 | 0.69 | 0.77 | 1.95 | 7057 | 977 | 5 | 0 | 1 | 0 | 0 | logfile |
✘ | 8D1B | 27121 | 2024-03-11 | 2022-05-27 | 3.57 | 3.85 | 3.45 | 3.8 | 0.006 | 1.09 | 0.0 | 0.05 | 14.42 | 0.01 | 2.084 | 19.71 | 0.28 | 24.1 | 75.9 | 0.0 | -6.32 | 0.76 | 0.81 | 2.61 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 6724 | 874 | 4 | 0 | 0 | 0 | 0 | logfile |