The table shows a selection of parameters. Activate more columns using
the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 6o6A | 0631 | 2022-05-15 | 2019-03-05 | 3.6 | 3.69 | — | 3.6 | 0.008 | 0.99 | 0.0 | 0.06 | 15.67 | 0.01 | 1.986 | 6.42 | 0.00 | 7.4 | 92.6 | 0.0 | -6.33 | 0.60 | 0.77 | 2.17 | 3.6 | 0.004 | 0.76 | 1.0 | 0.04 | 17.41 | 0.00 | 2.175 | 14.06 | 0.64 | 6.9 | 93.1 | 0.0 | -1.10 | 2.52 | 0.62 | 0.78 | 1.52 | 27220 | 3312 | 8 | 0 | 8 | 0 | 0 | logfile |
✔ | 6F2D | 4173 | 2022-05-13 | 2017-11-24 | 4.2 | 4.27 | 4.05 | 4.1 | 0.010 | 1.19 | 0.0 | 0.05 | 9.30 | 0.01 | 2.023 | 26.32 | 0.51 | 16.3 | 83.0 | 0.7 | -6.32 | 0.71 | 0.72 | — | 4.1 | 0.003 | 0.87 | 0.0 | 0.04 | 12.99 | 0.01 | 2.156 | 13.18 | 0.00 | 7.8 | 91.5 | 0.7 | 0.02 | 2.02 | 0.75 | 0.77 | — | 12541 | 1629 | 10 | 0 | 0 | 0 | 0 | logfile |
✘ | 6VoY | 21301 | 2022-05-14 | 2020-02-01 | 3.7 | 4.09 | — | 4.0 | 0.013 | 1.52 | 30.0 | 0.10 | 24.39 | 0.01 | 1.583 | 35.15 | 0.46 | 2.4 | 97.6 | 0.0 | -6.32 | 0.69 | 0.82 | 2.12 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 17556 | 1724 | 16 | 180 | 6 | 0 | 0 | logfile |
✔ | 5XB1 | 6714 | 2022-05-16 | 2017-03-15 | 3.0 | 3.16 | 2.84 | 3.1 | 0.007 | 0.71 | 0.0 | 0.05 | 10.82 | 0.00 | 2.173 | 4.77 | 0.00 | 2.0 | 98.0 | 0.0 | -6.31 | 0.80 | 0.88 | 4.19 | 3.1 | 0.003 | 0.57 | 0.0 | 0.04 | 18.09 | 0.00 | 2.165 | 2.93 | 3.48 | 2.7 | 97.3 | 0.0 | 3.54 | 0.69 | 0.80 | 0.86 | 2.84 | 30847 | 3720 | 48 | 0 | 0 | 55 | 0 | logfile |
✔ | 6WTD | 21894 | 2022-05-13 | 2020-05-02 | 4.2 | 4.24 | — | 4.2 | 0.007 | 1.17 | 0.0 | 0.06 | 15.33 | 0.01 | 2.208 | 7.39 | 0.86 | 7.2 | 92.8 | 0.0 | -6.31 | 0.56 | 0.74 | — | 4.2 | 0.003 | 0.83 | 0.0 | 0.04 | 13.27 | 0.00 | 2.131 | 13.81 | 0.00 | 4.4 | 95.6 | 0.0 | -2.01 | 1.94 | 0.55 | 0.72 | — | 9139 | 1233 | 16 | 0 | 0 | 0 | 0 | logfile |
✔ | 6NQ0 | 0477 | 2022-05-13 | 2019-01-18 | 3.7 | 3.84 | — | 3.8 | 0.005 | 0.89 | 0.0 | 0.35 | 14.91 | 0.01 | 2.200 | 3.70 | 0.54 | 4.4 | 95.6 | 0.0 | -6.31 | 0.59 | 0.84 | 2.13 | 3.8 | 0.003 | 0.68 | 0.0 | 0.04 | 16.12 | 0.00 | 2.272 | 7.60 | 0.36 | 3.4 | 96.6 | 0.0 | -0.41 | 1.24 | 0.59 | 0.84 | 1.72 | 10140 | 1242 | 4 | 0 | 2 | 0 | 0 | logfile |
✔ | 6VHL | 21207 | 2022-05-12 | 2020-01-10 | 3.3 | 3.60 | — | 3.5 | 0.007 | 1.03 | 0.0 | 0.07 | 15.85 | 0.01 | 1.791 | 16.17 | 4.48 | 14.7 | 85.3 | 0.0 | -6.30 | 0.26 | 0.70 | 3.54 | 3.7 | 0.004 | 0.78 | 0.0 | 0.04 | 16.88 | 0.01 | 2.268 | 10.36 | 0.00 | 11.3 | 88.7 | 0.0 | -3.65 | 2.64 | 0.28 | 0.69 | 3.54 | 1190 | 158 | 4 | 0 | 0 | 0 | 0 | logfile |
✔ | 6HCY | 0199 | 2022-05-13 | 2018-08-17 | 3.1 | 3.48 | 3.04 | 3.4 | 0.030 | 1.92 | 0.0 | 0.06 | 19.58 | 0.02 | 2.017 | 2.67 | 0.79 | 6.2 | 93.8 | 0.0 | -6.30 | 0.67 | 0.89 | 5.10 | 3.4 | 0.003 | 1.01 | 0.0 | 0.04 | 18.72 | 0.00 | 2.248 | 7.53 | 0.44 | 4.5 | 95.5 | 0.0 | 0.47 | 1.76 | 0.73 | 0.92 | 3.31 | 11007 | 1308 | 6 | 0 | 15 | 0 | 0 | logfile |
✔ | 6M02 | 30028 | 2022-05-14 | 2020-02-19 | 3.2 | 3.49 | 3.90 | 3.9 | 0.006 | 0.96 | 0.0 | 0.05 | 16.46 | 0.01 | 2.263 | 6.57 | 1.64 | 7.0 | 93.0 | 0.0 | -6.29 | 0.60 | 0.70 | 1.57 | 3.9 | 0.003 | 0.69 | 0.0 | 0.04 | 17.04 | 0.00 | 2.288 | 10.89 | 0.42 | 3.8 | 96.2 | 0.0 | -1.81 | 1.20 | 0.61 | 0.72 | 1.42 | 18935 | 2345 | 7 | 0 | 0 | 0 | 0 | logfile |
✔ | 6E9Z | 9021 | 2022-05-16 | 2018-08-01 | 3.4 | 3.50 | — | 3.4 | 0.011 | 0.85 | 0.0 | 0.05 | 10.27 | 0.01 | 1.132 | 13.25 | 0.00 | 4.5 | 95.1 | 0.4 | -6.29 | 0.55 | 0.77 | 3.60 | 3.5 | 0.003 | 0.62 | 0.0 | 0.03 | 15.82 | 0.00 | 1.876 | 8.16 | 0.12 | 2.7 | 97.3 | 0.0 | 2.47 | 1.91 | 0.57 | 0.81 | 1.19 | 32652 | 2025 | 9 | 0 | 0 | 0 | 16830 | logfile |
✔ | 7EEP | 31079 | 2022-05-14 | 2021-03-19 | 3.75 | 3.62 | — | 3.7 | 0.009 | 1.20 | 0.0 | 0.07 | 11.99 | 0.01 | 2.267 | 3.30 | 1.19 | 10.3 | 89.6 | 0.1 | -6.29 | 0.63 | 0.84 | 2.90 | 3.7 | 0.003 | 0.74 | 0.0 | 0.04 | 15.88 | 0.01 | 2.088 | 7.28 | 0.50 | 7.8 | 92.2 | 0.0 | -3.22 | 1.22 | 0.61 | 0.83 | 2.03 | 68076 | 8532 | 24 | 0 | 0 | 0 | 0 | logfile |
✔ | 7AAV | 11693 | 2022-05-15 | 2020-09-04 | 4.2 | 4.27 | — | 4.1 | 0.003 | 0.78 | 0.0 | 0.15 | 12.59 | 0.01 | 2.116 | 1.55 | 0.18 | 8.9 | 91.1 | 0.1 | -6.29 | 0.76 | 0.77 | — | 4.1 | 0.003 | 0.67 | 0.0 | 0.04 | 13.49 | 0.00 | 1.702 | 5.58 | 0.00 | 11.8 | 88.2 | 0.0 | -1.20 | 0.52 | 0.78 | 0.80 | — | 25867 | 3970 | 19 | 181 | 3 | 0 | 0 | logfile |
✔ | 7CYF | 30499 | 2022-05-13 | 2020-09-03 | 3.15 | 2.98 | — | 3.3 | 0.009 | 1.28 | 5.0 | 0.07 | 11.57 | 0.01 | 1.890 | 5.78 | 1.90 | 9.3 | 90.7 | 0.0 | -6.27 | 0.61 | 0.83 | 4.14 | 3.3 | 0.003 | 0.75 | 0.0 | 0.04 | 15.06 | 0.00 | 2.103 | 7.25 | 0.29 | 6.9 | 93.1 | 0.0 | -0.57 | 1.22 | 0.63 | 0.85 | 2.32 | 9996 | 1329 | 12 | 0 | 6 | 0 | 0 | logfile |
✔ | 6P49 | 20247 | 2022-05-13 | 2019-05-26 | 3.3 | 3.60 | 3.10 | 3.6 | 0.007 | 1.50 | 0.0 | 0.08 | 16.18 | 0.01 | 2.164 | 18.26 | 3.28 | 6.9 | 92.4 | 0.7 | -6.27 | 0.54 | 0.57 | 1.13 | 3.6 | 0.014 | 1.32 | 0.0 | 0.05 | 16.97 | 0.01 | 1.996 | 20.71 | 0.10 | 10.4 | 89.5 | 0.2 | -4.38 | 1.70 | 0.55 | 0.60 | 1.05 | 9576 | 1166 | 4 | 0 | 2 | 0 | 0 | logfile |
✔ | 7E5Z | 30995 | 2022-05-14 | 2021-02-21 | 3.6 | 3.29 | 3.74 | 3.5 | 0.005 | 0.91 | 1.0 | 0.05 | 14.26 | 0.01 | 1.908 | 21.03 | 0.57 | 10.2 | 89.7 | 0.1 | -6.25 | 0.83 | 0.78 | 1.73 | 3.6 | 0.004 | 0.65 | 0.0 | 0.04 | 15.92 | 0.00 | 1.972 | 13.94 | 0.38 | 10.1 | 89.9 | 0.0 | -2.34 | 1.39 | 0.83 | 0.80 | 1.59 | 19054 | 1312 | 4 | 0 | 10 | 0 | 8810 | logfile |
✔ | 6o72 | 0638 | 2022-05-15 | 2019-03-07 | 3.0 | 3.18 | — | 3.2 | 0.009 | 1.20 | 0.0 | 0.06 | 15.63 | 0.01 | 2.062 | 8.40 | 0.00 | 7.4 | 92.6 | 0.0 | -6.25 | 0.63 | 0.80 | 2.52 | 3.2 | 0.004 | 0.76 | 0.0 | 0.04 | 17.80 | 0.01 | 2.186 | 13.36 | 2.93 | 6.5 | 93.5 | 0.0 | 0.17 | 0.77 | 0.64 | 0.82 | 1.89 | 28592 | 3432 | 8 | 0 | 28 | 0 | 0 | logfile |
✔ | 6i26 | 0328 | 2022-05-15 | 2018-10-31 | 4.3 | 4.37 | — | 4.2 | 0.005 | 0.89 | 0.0 | 0.05 | 8.22 | 0.01 | 0.411 | 6.12 | 0.50 | 6.4 | 93.3 | 0.3 | -6.25 | 0.75 | 0.60 | — | 4.2 | 0.003 | 0.68 | 0.0 | 0.04 | 10.67 | 0.00 | 2.211 | 6.17 | 0.00 | 6.6 | 93.4 | 0.0 | 0.06 | 0.98 | 0.82 | 0.75 | — | 22765 | 3366 | 1 | 0 | 221 | 0 | 0 | logfile |
✔ | 5H1R | 9571 | 2022-05-18 | 2016-10-11 | 3.6 | 4.23 | — | 4.2 | 0.014 | 1.36 | 0.0 | 0.07 | 13.16 | 0.01 | 1.968 | 31.49 | 0.94 | 12.9 | 85.7 | 1.4 | -6.24 | 0.54 | 0.74 | 1.84 | 4.2 | 0.009 | 1.18 | 1.0 | 0.05 | 17.26 | 0.01 | 1.895 | 24.84 | 0.41 | 11.0 | 88.4 | 0.6 | -1.88 | 1.05 | 0.57 | 0.76 | 1.45 | 47440 | 5760 | 16 | 0 | 0 | 0 | 0 | logfile |
✔ | 6oFE | 20043 | 2022-05-13 | 2019-03-29 | 3.61 | 3.70 | — | 3.6 | 0.006 | 0.63 | 0.0 | 0.04 | 10.07 | 0.01 | 2.325 | 1.57 | 0.00 | 5.3 | 94.7 | 0.0 | -6.24 | 0.64 | 0.85 | 2.72 | 3.6 | 0.003 | 0.56 | 0.0 | 0.04 | 16.26 | 0.00 | 2.167 | 6.20 | 0.38 | 3.9 | 96.1 | 0.0 | 3.76 | 0.61 | 0.65 | 0.86 | 1.15 | 12220 | 1560 | 20 | 0 | 0 | 0 | 0 | logfile |
✔ | 6CAA | 7441 | 2022-05-12 | 2018-01-29 | 3.9 | 3.97 | — | 3.9 | 0.009 | 1.33 | 0.0 | 0.07 | 12.41 | 0.01 | 1.886 | 9.42 | 0.00 | 13.0 | 87.0 | 0.0 | -6.23 | 0.64 | 0.79 | 1.91 | 3.9 | 0.003 | 0.85 | 0.0 | 0.04 | 15.71 | 0.00 | 2.172 | 12.50 | 0.37 | 10.7 | 89.3 | 0.0 | -1.08 | 2.14 | 0.65 | 0.79 | 1.29 | 7508 | 954 | 2 | 0 | 0 | 0 | 0 | logfile |