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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✘ | 7R42 | 14256 | 2024-03-15 | 2022-02-08 | 2.3 | 2.33 | — | 2.3 | 0.008 | 0.85 | 0.0 | 0.84 | 18.39 | 0.01 | 1.921 | 3.20 | 1.23 | 2.6 | 97.4 | 0.0 | 0.55 | 0.71 | 0.90 | 5.95 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 69480 | 8204 | 114 | 0 | 58 | 1545 | 0 | logfile |
✔ | 7R4C | 14292 | 2024-03-14 | 2022-02-08 | 2.3 | 2.35 | — | 2.3 | 0.007 | 0.81 | 0.0 | 0.85 | 17.01 | 0.01 | 1.908 | 3.18 | 0.01 | 2.2 | 97.7 | 0.0 | 0.69 | 0.74 | 0.91 | 6.21 | 2.3 | 0.007 | 1.31 | 0.0 | 0.26 | 16.43 | 0.00 | 1.818 | 3.83 | 0.75 | 1.6 | 98.4 | 0.0 | 1.75 | 0.79 | 0.73 | 0.92 | 5.53 | 68045 | 8069 | 115 | 0 | 51 | 1525 | 0 | logfile |
✘ | 8PN7 | 17777 | 2024-03-23 | 2023-06-30 | 2.03 | 2.46 | 2.13 | 2.4 | 0.044 | 1.46 | 0.0 | 0.04 | 13.01 | 0.00 | 1.664 | 8.62 | 0.35 | 1.5 | 98.5 | 0.0 | 1.20 | 0.72 | 0.85 | 5.80 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 34872 | 4308 | 36 | 0 | 12 | 1476 | 0 | logfile |
✔ | 6ZK9 | 11241 | 2024-03-21 | 2020-06-30 | 2.3 | 2.55 | — | 2.4 | 0.008 | 1.05 | 0.0 | 1.58 | 10.85 | 0.01 | 2.257 | 5.07 | 0.07 | 3.2 | 96.8 | 0.0 | -2.52 | 0.78 | 0.92 | 6.57 | 2.4 | 0.012 | 2.33 | 0.0 | 0.48 | 14.99 | 0.00 | 2.161 | 8.14 | 1.54 | 2.6 | 97.4 | 0.0 | 0.47 | 0.44 | 0.80 | 0.93 | 6.06 | 29587 | 3480 | 45 | 0 | 19 | 1472 | 0 | logfile |
✔ | 7FGH | 31581 | 2024-03-24 | 2021-07-27 | 2.18 | 2.32 | — | 2.3 | 0.009 | 1.01 | 0.0 | 0.06 | 16.26 | 0.01 | 2.118 | 1.61 | 1.31 | 3.8 | 96.2 | 0.0 | -0.25 | 0.77 | 0.80 | 5.03 | 2.3 | 0.003 | 0.59 | 0.0 | 0.04 | 16.37 | 0.00 | 2.212 | 1.82 | 1.22 | 2.8 | 97.2 | 0.0 | 0.21 | 1.24 | 0.83 | 0.89 | 4.78 | 44532 | 5448 | 36 | 12 | 12 | 1416 | 0 | logfile |
✔ | 8CAi | 16526 | 2024-03-23 | 2023-01-24 | 2.08 | 1.77 | 1.93 | 1.9 | 0.014 | 1.51 | 2.0 | 0.13 | 22.07 | 0.03 | 1.839 | 0.59 | 0.86 | 3.7 | 96.2 | 0.1 | -1.66 | 0.65 | 0.81 | 5.19 | 1.9 | 0.002 | 0.60 | 0.0 | 0.04 | 22.42 | 0.01 | 1.904 | 8.53 | 1.41 | 2.1 | 97.9 | 0.0 | 0.82 | 1.57 | 0.73 | 0.84 | 4.63 | 37814 | 1552 | 33 | 1114 | 90 | 1416 | 0 | logfile |
✔ | 7R4F | 14302 | 2024-03-13 | 2022-02-08 | 2.4 | 2.39 | — | 2.3 | 0.007 | 0.79 | 0.0 | 0.87 | 18.77 | 0.01 | 1.904 | 2.94 | 1.29 | 2.5 | 97.5 | 0.0 | 0.66 | 0.73 | 0.90 | 5.70 | 2.3 | 0.007 | 1.34 | 0.0 | 0.26 | 17.19 | 0.00 | 1.286 | 4.06 | 1.38 | 1.8 | 98.2 | 0.0 | 1.57 | 0.26 | 0.74 | 0.91 | 5.18 | 65494 | 7788 | 114 | 0 | 44 | 1415 | 0 | logfile |
✔ | 6Z0U | 11023 | 2024-03-18 | 2020-05-11 | 2.9 | 2.99 | — | 2.9 | 0.007 | 0.73 | 0.0 | 0.05 | 13.19 | 0.01 | 2.040 | 10.02 | 0.52 | 6.5 | 93.5 | 0.0 | -3.59 | 0.78 | 0.89 | 4.49 | 2.9 | 0.003 | 0.60 | 0.0 | 0.04 | 14.97 | 0.00 | 2.121 | 8.38 | 1.31 | 4.4 | 95.6 | 0.0 | -0.22 | 0.34 | 0.77 | 0.90 | 3.80 | 87288 | 10896 | 72 | 0 | 24 | 1392 | 0 | logfile |
✔ | 7o6E | 12738 | 2024-03-23 | 2021-04-10 | 2.1 | 1.78 | 2.15 | 1.6 | 0.017 | 1.10 | 0.0 | 0.07 | 18.13 | 0.01 | 2.110 | 3.49 | 0.00 | 2.3 | 97.7 | 0.0 | 2.10 | 0.87 | 0.88 | 6.02 | 1.6 | 0.003 | 0.47 | 0.0 | 0.03 | 18.19 | 0.00 | 2.218 | 3.52 | 0.58 | 0.5 | 99.5 | 0.0 | 4.44 | 0.29 | 0.88 | 0.89 | 5.30 | 35304 | 4248 | 48 | 0 | 0 | 1392 | 0 | logfile |
✔ | 8A5i | 15175 | 2024-03-18 | 2022-06-15 | 2.3 | 1.92 | 2.20 | 2.2 | 0.011 | 1.72 | 1.0 | 0.12 | 23.17 | 0.02 | 1.234 | 3.32 | 2.48 | 5.4 | 93.2 | 1.4 | -2.45 | 0.49 | 0.73 | 5.52 | 2.1 | 0.005 | 0.80 | 0.0 | 0.04 | 23.45 | 0.01 | 1.614 | 7.62 | 2.76 | 4.0 | 95.7 | 0.2 | -0.46 | 0.86 | 0.68 | 0.84 | 5.33 | 89799 | 2973 | 56 | 3022 | 172 | 1381 | 0 | logfile |
✔ | 8BMT | 16125 | 2024-03-13 | 2022-11-10 | 2.5 | 2.69 | 2.49 | 2.5 | 0.003 | 0.62 | 0.0 | 0.05 | 15.40 | 0.00 | 1.922 | 10.73 | 1.12 | 1.8 | 98.2 | 0.0 | 1.86 | 0.83 | 0.85 | 3.16 | 2.6 | 0.003 | 0.68 | 0.0 | 0.05 | 16.20 | 0.00 | 1.987 | 12.70 | 1.07 | 1.7 | 98.3 | 0.0 | 1.10 | 1.50 | 0.84 | 0.87 | 2.86 | 65711 | 8680 | 56 | 0 | 42 | 1339 | 0 | logfile |
✔ | 7R45 | 14272 | 2024-03-15 | 2022-02-08 | 2.4 | 2.37 | — | 2.3 | 0.008 | 0.84 | 0.0 | 0.85 | 18.69 | 0.01 | 1.801 | 2.78 | 1.20 | 2.3 | 97.7 | 0.0 | 0.76 | 0.72 | 0.90 | 5.82 | 2.4 | 0.007 | 1.30 | 0.0 | 0.26 | 16.99 | 0.00 | 1.977 | 4.31 | 1.36 | 1.5 | 98.5 | 0.0 | 1.74 | 1.06 | 0.72 | 0.91 | 5.37 | 68195 | 8098 | 115 | 0 | 52 | 1334 | 0 | logfile |
✔ | 8AB6 | 15312 | 2024-03-22 | 2022-07-04 | 2.0 | 1.80 | 1.92 | 1.9 | 0.010 | 1.60 | 28.0 | 0.11 | 17.51 | 0.01 | 2.091 | 3.07 | 1.89 | 2.3 | 97.7 | 0.0 | -0.82 | 0.68 | 0.86 | 6.61 | 1.9 | 0.003 | 0.60 | 0.0 | 0.04 | 16.78 | 0.00 | 2.059 | 3.63 | 0.74 | 1.7 | 98.3 | 0.0 | 2.05 | 0.95 | 0.72 | 0.86 | 6.21 | 32914 | 3878 | 53 | 0 | 30 | 1326 | 0 | logfile |
✔ | 7SCA | 25031 | 2024-03-11 | 2021-09-27 | 2.1 | 2.23 | 2.15 | 2.2 | 0.011 | 1.14 | 7.0 | 0.07 | 14.95 | 0.01 | 2.057 | 5.44 | 0.78 | 1.0 | 99.0 | 0.0 | 2.17 | 0.79 | 0.85 | 5.74 | 2.2 | 0.003 | 0.58 | 0.0 | 0.04 | 16.11 | 0.00 | 2.149 | 8.14 | 1.25 | 1.0 | 99.0 | 0.0 | 2.73 | 1.09 | 0.79 | 0.85 | 5.36 | 55437 | 6836 | 116 | 0 | 54 | 1325 | 0 | logfile |
✔ | 8BKB | 16095 | 2024-03-23 | 2022-11-08 | 2.2 | 1.97 | 2.09 | 2.0 | 0.003 | 0.61 | 0.0 | 0.04 | 17.88 | 0.00 | 2.225 | 1.59 | 1.40 | 1.4 | 98.6 | 0.0 | 4.82 | 0.71 | 0.86 | 6.67 | 2.0 | 0.005 | 0.68 | 0.0 | 0.04 | 17.67 | 0.01 | 2.092 | 3.51 | 2.00 | 1.8 | 98.2 | 0.0 | 4.47 | 0.14 | 0.71 | 0.87 | 7.13 | 35139 | 4128 | 54 | 0 | 6 | 1317 | 0 | logfile |
✔ | 7R41 | 14251 | 2024-03-15 | 2022-02-08 | 2.3 | 2.35 | — | 2.4 | 0.008 | 0.85 | 0.0 | 0.84 | 18.23 | 0.01 | 1.904 | 3.40 | 1.01 | 2.4 | 97.5 | 0.0 | 0.57 | 0.71 | 0.90 | 5.72 | 2.4 | 0.007 | 1.30 | 0.0 | 0.25 | 16.95 | 0.00 | 2.011 | 4.67 | 1.34 | 1.8 | 98.2 | 0.0 | 1.68 | 0.78 | 0.71 | 0.91 | 5.16 | 69138 | 8194 | 111 | 0 | 57 | 1307 | 0 | logfile |
✔ | 8BLC | 16106 | 2024-03-11 | 2022-11-09 | 2.7 | 2.79 | 2.65 | 2.7 | 0.005 | 0.51 | 0.0 | 0.04 | 17.03 | 0.00 | 2.062 | 11.39 | 1.44 | 0.9 | 99.1 | 0.0 | 1.13 | 0.81 | 0.83 | 2.54 | 2.7 | 0.002 | 0.46 | 0.0 | 0.04 | 16.74 | 0.00 | 2.049 | 11.32 | 0.67 | 0.9 | 99.1 | 0.0 | 1.42 | 0.25 | 0.82 | 0.86 | 2.40 | 55646 | 7336 | 42 | 0 | 42 | 1298 | 0 | logfile |
✔ | 6ZKA | 11242 | 2024-03-24 | 2020-06-30 | 2.5 | 2.55 | — | 2.5 | 0.009 | 1.02 | 0.0 | 0.16 | 13.83 | 0.01 | 2.189 | 4.53 | 0.07 | 2.5 | 97.5 | 0.0 | -2.18 | 0.74 | 0.91 | 6.10 | 2.5 | 0.003 | 0.59 | 0.0 | 0.04 | 16.19 | 0.00 | 2.073 | 8.93 | 1.79 | 2.0 | 98.0 | 0.0 | 1.81 | 1.10 | 0.75 | 0.91 | 5.19 | 40800 | 4694 | 74 | 0 | 28 | 1293 | 0 | logfile |
✔ | 8P5V | 17454 | 2024-03-11 | 2023-05-24 | 2.07 | 2.90 | 2.14 | 2.5 | 0.009 | 1.09 | 0.0 | 0.06 | 14.45 | 0.02 | 2.018 | 1.82 | 0.53 | 2.7 | 97.3 | 0.0 | 0.06 | 0.90 | 0.95 | 6.07 | 2.6 | 0.005 | 0.67 | 0.0 | 0.04 | 15.02 | 0.00 | 1.912 | 3.15 | 0.58 | 2.1 | 97.9 | 0.0 | 1.32 | 1.70 | 0.86 | 0.93 | 5.62 | 54248 | 6726 | 18 | 0 | 24 | 1280 | 0 | logfile |
✔ | 7N8o | 24239 | 2024-03-11 | 2021-06-15 | 1.93 | 1.73 | — | 1.9 | 0.025 | 2.40 | 0.0 | 0.11 | 22.23 | 0.01 | 1.522 | 14.77 | 1.91 | 3.0 | 96.9 | 0.1 | 0.75 | 0.73 | 0.75 | 5.48 | 1.8 | 0.004 | 0.76 | 0.0 | 0.05 | 18.02 | 0.01 | 2.008 | 11.90 | 1.84 | 2.9 | 97.1 | 0.0 | 0.97 | 0.35 | 0.75 | 0.77 | 5.38 | 54656 | 5544 | 113 | 0 | 228 | 1236 | 0 | logfile |