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Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 7TBZ | 25802 | 2024-03-16 | 2021-12-22 | 4.3 | 4.56 | 4.01 | 4.0 | 0.002 | 0.56 | 0.0 | 0.04 | 14.93 | 0.00 | 2.207 | 6.66 | 0.00 | 3.8 | 96.2 | 0.1 | -2.61 | 0.70 | 0.77 | — | 4.0 | 0.003 | 0.67 | 0.0 | 0.04 | 12.03 | 0.00 | 2.157 | 9.99 | 0.00 | 5.9 | 94.1 | 0.0 | 0.20 | 2.65 | 0.72 | 0.82 | — | 13275 | 1788 | 4 | 0 | 10 | 0 | 0 | logfile |
✔ | 7F6D | 31478 | 2024-03-21 | 2021-06-25 | 3.85 | 4.03 | — | 3.9 | 0.002 | 0.59 | 0.0 | 0.04 | 13.43 | 0.00 | 2.214 | 9.10 | 0.03 | 6.7 | 93.3 | 0.0 | -0.98 | 0.79 | 0.77 | 1.28 | 3.9 | 0.004 | 0.67 | 0.0 | 0.04 | 15.34 | 0.00 | 2.144 | 12.06 | 2.58 | 8.4 | 91.6 | 0.1 | -1.10 | 0.37 | 0.80 | 0.79 | 1.12 | 28930 | 3790 | 8 | 0 | 0 | 0 | 0 | logfile |
✔ | 7E8H | 31019 | 2024-03-24 | 2021-03-01 | 4.5 | 4.06 | 4.44 | 3.7 | 0.002 | 0.62 | 0.0 | 0.04 | 14.21 | 0.00 | 2.089 | 18.26 | 0.00 | 6.9 | 93.0 | 0.1 | -0.78 | 0.73 | 0.62 | — | 3.7 | 0.003 | 0.65 | 0.0 | 0.04 | 14.28 | 0.00 | 2.118 | 20.71 | 0.00 | 8.1 | 91.9 | 0.0 | -1.10 | 0.43 | 0.78 | 0.73 | — | 44894 | 5576 | 12 | 0 | 0 | 0 | 0 | logfile |
✔ | 7XoM | 33352 | 2024-03-10 | 2022-05-01 | 3.2 | 3.57 | 3.19 | 3.2 | 0.002 | 0.49 | 0.0 | 0.04 | 13.30 | 0.00 | 2.175 | 10.99 | 0.02 | 0.9 | 99.1 | 0.0 | 2.16 | 0.87 | 0.86 | 1.74 | 3.2 | 0.003 | 0.54 | 0.0 | 0.04 | 15.16 | 0.00 | 2.138 | 12.09 | 0.99 | 1.1 | 98.9 | 0.0 | 2.04 | 1.28 | 0.88 | 0.88 | 1.58 | 54129 | 7336 | 15 | 0 | 32 | 0 | 0 | logfile |
✔ | 6J2X | 9772 | 2024-03-10 | 2019-01-03 | 3.8 | 3.99 | — | 3.9 | 0.002 | 0.40 | 0.0 | 0.04 | 7.12 | 0.00 | 2.220 | 6.65 | 0.00 | 5.8 | 94.1 | 0.1 | -3.52 | 0.80 | 0.70 | 0.49 | 3.9 | 0.003 | 0.79 | 1.0 | 0.05 | 15.50 | 0.00 | 2.027 | 18.60 | 2.34 | 5.0 | 94.8 | 0.2 | -0.94 | 1.89 | 0.84 | 0.78 | 0.94 | 106176 | 13501 | 47 | 0 | 0 | 0 | 0 | logfile |
✔ | 8TDV | 41174 | 2024-03-15 | 2023-07-05 | 3.44 | 3.66 | 3.43 | 3.6 | 0.002 | 0.53 | 0.0 | 0.04 | 14.04 | 0.00 | 2.000 | 6.00 | 0.53 | 7.4 | 92.6 | 0.0 | -0.51 | 0.53 | 0.61 | 1.95 | 3.6 | 0.003 | 0.71 | 0.0 | 0.05 | 16.42 | 0.00 | 2.018 | 10.12 | 2.85 | 7.3 | 92.7 | 0.0 | -1.03 | 1.36 | 0.53 | 0.67 | 1.23 | 10957 | 1740 | 8 | 13 | 2 | 0 | 0 | logfile |
✔ | 8EFE | 28081 | 2024-03-11 | 2022-09-08 | 3.8 | 4.45 | 3.82 | 3.8 | 0.002 | 0.52 | 0.0 | 0.04 | 14.48 | 0.00 | 1.948 | 8.30 | 0.52 | 3.8 | 96.2 | 0.0 | 1.15 | 0.93 | 0.82 | 1.08 | 3.8 | 0.003 | 0.56 | 0.0 | 0.04 | 16.03 | 0.00 | 1.947 | 11.81 | 2.21 | 4.5 | 95.5 | 0.0 | 0.77 | 0.44 | 0.93 | 0.84 | 1.02 | 7135 | 886 | 3 | 0 | 2 | 0 | 0 | logfile |
✔ | 7EoQ | 31227 | 2024-03-19 | 2021-04-22 | 4.1 | 4.43 | — | 4.1 | 0.002 | 0.47 | 0.0 | 0.04 | 10.62 | 0.00 | 2.195 | 7.68 | 2.14 | 4.7 | 95.3 | 0.0 | 0.09 | 0.86 | 0.74 | — | 4.1 | 0.003 | 0.62 | 0.0 | 0.04 | 11.22 | 0.00 | 2.189 | 14.68 | 0.00 | 7.6 | 92.4 | 0.0 | -0.65 | 1.24 | 0.89 | 0.80 | — | 24742 | 3144 | 8 | 0 | 10 | 0 | 0 | logfile |
✔ | 6UVA | 20906 | 2024-03-14 | 2019-11-01 | 2.3 | 2.12 | 2.31 | 2.2 | 0.002 | 0.55 | 0.0 | 0.04 | 18.04 | 0.00 | 2.207 | 6.66 | 3.36 | 3.2 | 96.8 | 0.0 | -2.29 | 0.63 | 0.72 | 2.83 | 2.3 | 0.002 | 0.58 | 0.0 | 0.04 | 18.38 | 0.00 | 2.149 | 8.35 | 3.36 | 3.8 | 96.2 | 0.0 | 0.39 | 1.29 | 0.65 | 0.78 | 2.62 | 9561 | 1199 | 7 | 0 | 0 | 0 | 0 | logfile |
✘ | 7VX9 | 32172 | 2024-03-25 | 2021-11-12 | 4.0 | 4.30 | — | 4.2 | 0.002 | 0.37 | 0.0 | 0.04 | 7.20 | 0.00 | 2.022 | 12.52 | 0.00 | 4.1 | 95.8 | 0.1 | -2.09 | 0.63 | 0.59 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 46098 | 3789 | 4 | 0 | 0 | 0 | 16250 | logfile |
✔ | 7VXi | 32180 | 2024-03-19 | 2021-11-12 | 3.4 | 2.35 | — | 2.0 | 0.002 | 0.49 | 0.0 | 0.04 | 7.29 | 0.00 | 2.125 | 3.01 | 0.00 | 4.3 | 95.5 | 0.1 | -1.83 | 0.65 | 0.60 | 1.83 | 2.1 | 0.003 | 0.65 | 0.0 | 0.04 | 14.03 | 0.00 | 2.113 | 9.72 | 2.08 | 4.1 | 95.7 | 0.2 | -0.05 | 1.44 | 0.73 | 0.71 | 2.38 | 24570 | 3144 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 6F40 | 4180 | 2024-03-25 | 2017-11-29 | 3.7 | 3.79 | — | 3.7 | 0.002 | 0.64 | 0.0 | 0.04 | 14.92 | 0.01 | 2.166 | 7.42 | 0.84 | 10.9 | 89.0 | 0.1 | -5.20 | 0.78 | 0.74 | 2.25 | 3.7 | 0.004 | 0.79 | 1.0 | 0.04 | 17.18 | 0.00 | 1.885 | 12.35 | 3.47 | 8.5 | 91.5 | 0.0 | -2.57 | 0.65 | 0.82 | 0.80 | 1.83 | 47396 | 5667 | 28 | 113 | 7 | 0 | 0 | logfile |
✔ | 5MBV | 3460 | 2024-03-19 | 2016-11-08 | 3.8 | 4.14 | — | 3.8 | 0.002 | 0.51 | 0.0 | 0.04 | 10.21 | 0.00 | 2.172 | 7.06 | 0.74 | 4.7 | 95.2 | 0.1 | -3.37 | 0.87 | 0.81 | 0.98 | 3.8 | 0.004 | 0.67 | 0.0 | 0.04 | 13.40 | 0.00 | 2.133 | 11.41 | 1.17 | 3.8 | 96.2 | 0.0 | 1.37 | 0.85 | 0.88 | 0.83 | 1.48 | 24118 | 3014 | 5 | 0 | 0 | 0 | 0 | logfile |
✔ | 8G6K | 29772 | 2024-03-14 | 2023-02-15 | 3.6 | 3.71 | 3.52 | 3.4 | 0.002 | 0.48 | 0.0 | 0.04 | 4.19 | 0.00 | 2.523 | 0.20 | 0.00 | 2.7 | 97.3 | 0.0 | 1.65 | 0.54 | 0.71 | — | 3.5 | 0.004 | 0.68 | 0.0 | 0.04 | 4.83 | 0.00 | 2.269 | 4.05 | 0.00 | 8.2 | 91.8 | 0.0 | -0.23 | 1.47 | 0.54 | 0.74 | — | 9388 | 1379 | 7 | 0 | 0 | 0 | 2576 | logfile |
✔ | 7DR6 | 30824 | 2024-03-11 | 2020-12-26 | 4.1 | 4.22 | — | 4.2 | 0.002 | 0.55 | 0.0 | 0.04 | 7.81 | 0.00 | 2.196 | 10.05 | 0.12 | 4.9 | 94.9 | 0.1 | -2.74 | 0.68 | 0.63 | — | 4.2 | 0.003 | 0.75 | 0.0 | 0.04 | 13.22 | 0.00 | 2.122 | 15.61 | 0.03 | 3.2 | 96.7 | 0.0 | 0.11 | 2.26 | 0.73 | 0.73 | — | 59957 | 7661 | 35 | 0 | 0 | 0 | 0 | logfile |
✔ | 6XJB | 22205 | 2024-03-14 | 2020-06-23 | 3.8 | 4.06 | — | 3.9 | 0.002 | 0.56 | 0.0 | 0.04 | 13.11 | 0.00 | 2.165 | 9.70 | 0.00 | 8.6 | 91.4 | 0.0 | -3.06 | 0.88 | 0.82 | 1.76 | 3.9 | 0.003 | 0.63 | 0.0 | 0.04 | 15.36 | 0.00 | 2.083 | 12.82 | 4.27 | 7.5 | 92.5 | 0.0 | -1.34 | 1.82 | 0.88 | 0.85 | 1.85 | 10070 | 1277 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 7Xo1 | 33333 | 2024-03-10 | 2022-04-30 | 3.0 | 2.71 | 1.85 | 3.1 | 0.002 | 0.53 | 0.0 | 0.05 | 16.42 | 0.00 | 2.269 | 6.86 | 0.00 | 5.0 | 95.0 | 0.0 | -2.46 | 0.45 | 0.86 | 4.75 | 3.1 | 0.007 | 0.66 | 0.0 | 0.05 | 18.46 | 0.00 | 2.280 | 3.05 | 1.55 | 8.3 | 91.7 | 0.0 | -2.15 | 0.32 | 0.44 | 0.87 | 5.88 | 2550 | 372 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 7VXA | 32173 | 2024-03-25 | 2021-11-12 | 3.9 | 4.16 | — | 4.1 | 0.002 | 0.41 | 0.0 | 0.04 | 7.17 | 0.00 | 2.017 | 12.97 | 0.00 | 4.3 | 95.7 | 0.0 | -1.90 | 0.60 | 0.60 | 0.95 | 4.0 | 0.004 | 0.72 | 0.0 | 0.04 | 13.80 | 0.00 | 1.658 | 34.97 | 3.13 | 5.6 | 94.3 | 0.1 | -0.59 | 1.68 | 0.65 | 0.72 | 1.08 | 46176 | 3795 | 4 | 0 | 0 | 0 | 16288 | logfile |
✘ | 6RKV | 4912 | 2024-03-16 | 2019-04-30 | 4.6 | 4.86 | — | 4.5 | 0.002 | 0.53 | 0.0 | 0.04 | 13.18 | 0.00 | 2.207 | 7.23 | 0.00 | 5.3 | 94.7 | 0.0 | -1.73 | 0.87 | 0.80 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 15460 | 1784 | 8 | 64 | 0 | 0 | 0 | logfile |
✘ | 7P5Y | 13208 | 2024-03-24 | 2021-07-15 | 3.29 | 2.97 | 3.19 | 3.1 | 0.002 | 0.49 | 0.0 | 0.04 | 11.33 | 0.00 | 2.158 | 10.43 | 2.64 | 3.5 | 96.5 | 0.0 | -0.32 | 0.72 | 0.72 | 1.77 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 41106 | 5028 | 12 | 0 | 0 | 0 | 0 | logfile |