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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 7SGF | 25109 | 2023-11-15 | 2021-10-05 | 4.41 | 4.60 | 4.16 | 4.4 | 0.022 | 2.04 | 0.0 | 0.15 | 9.26 | 0.01 | 2.354 | 1.42 | 0.00 | 1.9 | 98.1 | 0.0 | -0.03 | 0.77 | 0.70 | — | 4.4 | 0.004 | 0.99 | 0.0 | 0.05 | 12.96 | 0.00 | 2.105 | 21.42 | 0.00 | 8.6 | 91.4 | 0.0 | -2.15 | 1.05 | 0.79 | 0.74 | — | 12078 | 1641 | 42 | 0 | 87 | 0 | 0 | logfile |
✔ | 6V22 | 21025 | 2023-11-22 | 2019-11-22 | 3.2 | 3.50 | — | 3.4 | 0.014 | 1.41 | 0.0 | 0.06 | 17.77 | 0.02 | 2.257 | 5.84 | 0.21 | 4.3 | 95.7 | 0.0 | -3.73 | 0.73 | 0.86 | 3.42 | 3.4 | 0.004 | 0.55 | 0.0 | 0.04 | 16.13 | 0.00 | 2.127 | 7.99 | 0.15 | 3.9 | 96.1 | 0.0 | 0.48 | 1.56 | 0.73 | 0.87 | 3.25 | 37004 | 4380 | 16 | 0 | 100 | 0 | 0 | logfile |
✔ | 7E9H | 31032 | 2023-11-16 | 2021-03-04 | 4.0 | 2.62 | — | 1.9 | 0.003 | 0.48 | 0.0 | 0.04 | 11.36 | 0.00 | 2.202 | 8.04 | 0.06 | 2.9 | 97.1 | 0.0 | -2.83 | 0.68 | 0.61 | — | 1.9 | 0.003 | 0.70 | 0.0 | 0.04 | 14.89 | 0.00 | 2.095 | 14.69 | 0.54 | 4.7 | 95.3 | 0.0 | -0.84 | 2.00 | 0.72 | 0.68 | — | 16847 | 2309 | 8 | 0 | 0 | 0 | 0 | logfile |
✔ | 7RZ7 | 24753 | 2023-11-19 | 2021-08-27 | 4.2 | 3.77 | — | 3.7 | 0.007 | 0.93 | 0.0 | 0.05 | 10.90 | 0.01 | 2.256 | 4.92 | 0.66 | 4.3 | 95.6 | 0.1 | -4.36 | 0.64 | 0.77 | — | 3.6 | 0.003 | 0.61 | 0.0 | 0.04 | 12.21 | 0.00 | 2.042 | 11.47 | 0.00 | 3.8 | 96.2 | 0.0 | -0.52 | 0.91 | 0.64 | 0.77 | — | 28054 | 3554 | 8 | 0 | 4 | 0 | 0 | logfile |
✔ | 7UKF | 26579 | 2023-11-14 | 2022-04-01 | 3.02 | 3.32 | 3.06 | 3.3 | 0.004 | 0.61 | 0.0 | 0.04 | 11.50 | 0.00 | 2.290 | 9.17 | 0.00 | 2.3 | 97.7 | 0.0 | 1.20 | 0.58 | 0.83 | 3.02 | 3.3 | 0.004 | 0.54 | 0.0 | 0.04 | 14.31 | 0.00 | 2.159 | 9.11 | 0.24 | 3.3 | 96.7 | 0.0 | 1.79 | 0.30 | 0.57 | 0.84 | 2.25 | 8005 | 1036 | 5 | 0 | 5 | 0 | 0 | logfile |
✔ | 6WM3 | 21848 | 2023-11-17 | 2020-04-20 | 3.4 | 3.61 | — | 3.5 | 0.007 | 0.71 | 0.0 | 0.04 | 16.95 | 0.00 | 2.026 | 11.26 | 8.84 | 7.8 | 92.2 | 0.0 | -2.80 | 0.76 | 0.82 | 2.00 | 3.5 | 0.004 | 0.68 | 0.0 | 0.04 | 16.95 | 0.00 | 2.050 | 10.13 | 0.41 | 5.3 | 94.7 | 0.0 | 0.10 | 0.53 | 0.77 | 0.85 | 1.75 | 69755 | 9210 | 39 | 0 | 9 | 0 | 0 | logfile |
✔ | 7L8W | 23238 | 2023-11-16 | 2021-01-01 | 4.1 | 4.21 | 3.98 | 4.1 | 0.021 | 1.71 | 0.0 | 0.14 | 10.04 | 0.02 | 2.347 | 1.34 | 0.00 | 1.7 | 98.3 | 0.0 | 1.14 | 0.72 | 0.82 | — | 4.1 | 0.004 | 0.71 | 0.0 | 0.05 | 13.66 | 0.00 | 2.152 | 10.07 | 0.00 | 3.1 | 96.8 | 0.1 | -0.13 | 1.39 | 0.73 | 0.82 | — | 15803 | 1714 | 22 | 0 | 298 | 0 | 0 | logfile |
✔ | 7oM0 | 12982 | 2023-11-18 | 2021-05-21 | 3.1 | 3.92 | 3.06 | 3.2 | 0.004 | 0.63 | 0.0 | 0.04 | 13.27 | 0.00 | 2.209 | 7.54 | 0.04 | 2.7 | 97.3 | 0.0 | 1.24 | 0.90 | 0.85 | 2.71 | 3.3 | 0.004 | 0.50 | 0.0 | 0.04 | 14.63 | 0.00 | 2.172 | 11.35 | 0.16 | 3.0 | 97.0 | 0.0 | 0.99 | 0.89 | 0.90 | 0.88 | 2.37 | 22042 | 2657 | 12 | 0 | 6 | 0 | 0 | logfile |
✔ | 6W6J | 21557 | 2023-11-20 | 2020-03-17 | 3.2 | 3.50 | — | 3.4 | 0.007 | 0.89 | 0.0 | 0.05 | 15.32 | 0.01 | 1.459 | 11.27 | 0.82 | 12.4 | 87.5 | 0.2 | -4.72 | 0.82 | 0.84 | 1.62 | 3.4 | 0.003 | 0.68 | 0.0 | 0.04 | 16.61 | 0.00 | 2.098 | 8.17 | 0.99 | 9.1 | 90.8 | 0.1 | -1.15 | 1.29 | 0.84 | 0.87 | 1.49 | 29240 | 3725 | 13 | 0 | 38 | 0 | 0 | logfile |
✔ | 7UKD | 26577 | 2023-11-14 | 2022-04-01 | 2.88 | 3.39 | 3.14 | 3.3 | 0.004 | 0.62 | 0.0 | 0.04 | 12.08 | 0.00 | 2.195 | 9.18 | 0.00 | 1.9 | 98.1 | 0.0 | 1.30 | 0.58 | 0.83 | 2.72 | 3.3 | 0.004 | 0.60 | 0.0 | 0.04 | 14.98 | 0.00 | 2.137 | 8.31 | 1.54 | 2.8 | 97.2 | 0.0 | 2.07 | 0.91 | 0.55 | 0.84 | 2.54 | 8000 | 1036 | 5 | 0 | 4 | 0 | 0 | logfile |
✔ | 7Ui0 | 26521 | 2023-11-17 | 2022-03-28 | 3.4 | 3.51 | 3.43 | 3.6 | 0.008 | 0.81 | 0.0 | 0.05 | 13.94 | 0.01 | 2.052 | 14.18 | 0.00 | 5.3 | 94.7 | 0.0 | -1.38 | 0.81 | 0.82 | 2.16 | 3.6 | 0.004 | 0.63 | 0.0 | 0.04 | 15.79 | 0.00 | 2.121 | 11.79 | 0.29 | 3.9 | 96.1 | 0.0 | -0.88 | 1.35 | 0.83 | 0.86 | 2.68 | 19203 | 2415 | 9 | 0 | 0 | 0 | 0 | logfile |
✔ | 7TZF | 26208 | 2023-11-15 | 2022-02-15 | 2.4 | 2.00 | 2.20 | 2.3 | 0.010 | 0.53 | 0.0 | 0.04 | 14.56 | 0.00 | 2.252 | 4.74 | 1.43 | 1.0 | 99.0 | 0.0 | -2.36 | 0.54 | 0.77 | 4.70 | 2.0 | 0.003 | 0.60 | 0.0 | 0.04 | 16.83 | 0.00 | 2.219 | 6.21 | 1.43 | 1.8 | 98.2 | 0.0 | 0.83 | 0.83 | 0.57 | 0.83 | 4.87 | 10342 | 1272 | 13 | 0 | 19 | 25 | 0 | logfile |
✔ | 7WK3 | 32557 | 2023-11-19 | 2022-01-08 | 3.4 | 2.86 | — | 3.4 | 0.004 | 0.56 | 0.0 | 0.04 | 7.18 | 0.00 | 1.998 | 3.79 | 0.00 | 3.6 | 96.3 | 0.0 | -2.17 | 0.65 | 0.57 | 1.77 | 3.3 | 0.004 | 0.72 | 0.0 | 0.04 | 14.28 | 0.00 | 2.082 | 10.49 | 0.36 | 3.3 | 96.7 | 0.0 | -0.16 | 1.11 | 0.79 | 0.79 | 1.77 | 24805 | 3162 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 6W6G | 21554 | 2023-11-19 | 2020-03-16 | 3.1 | 3.46 | — | 3.3 | 0.006 | 0.79 | 0.0 | 0.05 | 15.45 | 0.00 | 2.131 | 10.22 | 0.66 | 11.5 | 88.3 | 0.2 | -4.32 | 0.84 | 0.86 | 2.18 | 3.3 | 0.005 | 0.73 | 0.0 | 0.05 | 16.61 | 0.00 | 2.124 | 8.55 | 1.01 | 10.4 | 89.5 | 0.1 | -1.37 | 2.22 | 0.83 | 0.87 | 2.02 | 27581 | 3506 | 13 | 0 | 38 | 0 | 0 | logfile |
✔ | 6RWo | 10044 | 2023-11-17 | 2019-06-05 | 3.05 | 3.20 | 3.05 | 3.2 | 0.013 | 0.82 | 0.0 | 0.05 | 17.06 | 0.01 | 1.994 | 2.29 | 4.10 | 3.3 | 96.7 | 0.0 | -3.00 | 0.67 | 0.83 | 3.08 | 3.2 | 0.006 | 0.69 | 0.0 | 0.05 | 19.26 | 0.00 | 1.728 | 5.68 | 0.34 | 4.1 | 95.9 | 0.0 | -0.13 | 0.54 | 0.73 | 0.85 | 3.14 | 18366 | 2076 | 26 | 86 | 16 | 6 | 0 | logfile |
✔ | 7XM1 | 33289 | 2023-11-14 | 2022-04-24 | 3.96 | 3.41 | 3.91 | 4.0 | 0.002 | 0.43 | 0.0 | 0.04 | 15.16 | 0.00 | 2.503 | 2.22 | 0.00 | 3.3 | 96.7 | 0.0 | 2.33 | 0.73 | 0.81 | 1.85 | 3.9 | 0.003 | 0.56 | 0.0 | 0.04 | 18.87 | 0.00 | 2.214 | 4.30 | 0.31 | 3.3 | 96.7 | 0.0 | 2.60 | 0.65 | 0.74 | 0.83 | 1.49 | 60240 | 7380 | 101 | 0 | 60 | 0 | 0 | logfile |
✔ | 7L86 | 23223 | 2023-11-16 | 2020-12-31 | 3.4 | 3.54 | 3.36 | 3.5 | 0.023 | 1.70 | 0.0 | 0.14 | 9.63 | 0.02 | 2.361 | 1.29 | 0.00 | 1.5 | 98.5 | 0.0 | 0.96 | 0.73 | 0.84 | 4.17 | 3.5 | 0.003 | 0.61 | 0.0 | 0.04 | 14.38 | 0.00 | 2.193 | 6.14 | 0.27 | 2.1 | 97.9 | 0.0 | 0.31 | 1.21 | 0.72 | 0.85 | 3.03 | 15802 | 1686 | 47 | 0 | 323 | 0 | 0 | logfile |
✔ | 7TCP | 25816 | 2023-11-16 | 2021-12-27 | 3.84 | 3.97 | — | 3.9 | 0.002 | 0.37 | 0.0 | 0.03 | 9.57 | 0.00 | 2.327 | 4.21 | 1.26 | 2.8 | 97.2 | 0.0 | 2.66 | 0.70 | 0.81 | 2.29 | 3.9 | 0.003 | 0.50 | 0.0 | 0.04 | 12.75 | 0.00 | 2.113 | 5.39 | 0.60 | 3.3 | 96.7 | 0.0 | 2.51 | 0.36 | 0.71 | 0.83 | 2.44 | 14992 | 1912 | 12 | 0 | 12 | 0 | 0 | logfile |
✔ | 7EEQ | 31080 | 2023-11-21 | 2021-03-19 | 3.96 | 3.15 | — | 3.0 | 0.006 | 0.98 | 0.0 | 0.06 | 10.42 | 0.01 | 2.316 | 4.10 | 0.17 | 12.0 | 88.0 | 0.0 | -4.80 | 0.52 | 0.74 | 2.63 | 3.0 | 0.004 | 0.71 | 0.0 | 0.04 | 13.64 | 0.00 | 2.187 | 9.87 | 0.17 | 9.6 | 90.4 | 0.0 | -3.21 | 1.16 | 0.53 | 0.76 | 2.86 | 34260 | 4488 | 24 | 0 | 0 | 0 | 0 | logfile |
✔ | 6XSK | 22302 | 2023-11-17 | 2020-07-15 | 3.85 | 4.41 | 3.93 | 4.2 | 0.006 | 1.06 | 0.0 | 0.07 | 12.91 | 0.01 | 2.271 | 4.44 | 0.37 | 2.1 | 97.9 | 0.0 | 0.19 | 0.83 | 0.83 | 1.60 | 4.2 | 0.005 | 0.73 | 0.0 | 0.04 | 14.84 | 0.00 | 2.090 | 13.35 | 0.53 | 3.4 | 96.6 | 0.0 | 0.26 | 1.63 | 0.84 | 0.85 | 1.85 | 17322 | 2163 | 27 | 0 | 36 | 0 | 0 | logfile |