The table shows a selection of parameters. Activate more columns using
the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 7T2E | 25611 | 2023-09-27 | 2021-12-03 | 2.7 | 3.14 | — | 3.0 | 0.003 | 0.54 | 0.0 | 0.04 | 16.11 | 0.00 | 2.242 | 1.92 | 1.18 | 0.3 | 99.7 | 0.0 | 0.14 | 0.34 | 0.84 | 5.04 | 3.0 | 0.002 | 0.49 | 0.0 | 0.04 | 16.21 | 0.00 | 2.222 | 2.35 | 1.18 | 0.3 | 99.7 | 0.0 | 0.45 | 0.13 | 0.36 | 0.86 | 4.79 | 2390 | 312 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 7C1D | 30269 | 2023-09-27 | 2020-05-03 | 3.8 | 4.18 | — | 4.3 | 0.004 | 0.71 | 0.0 | 0.05 | 13.99 | 0.00 | 2.367 | 18.87 | 0.00 | 20.4 | 79.6 | 0.0 | -6.46 | 0.34 | 0.74 | 3.47 | 6.5 | 0.003 | 0.63 | 0.0 | 0.05 | 14.86 | 0.00 | 2.265 | 16.18 | 2.08 | 14.6 | 85.4 | 0.0 | -4.73 | 2.82 | 0.39 | 0.75 | 3.16 | 2034 | 306 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 7QJW | 14024 | 2023-09-28 | 2021-12-17 | 2.81 | 2.81 | 1.88 | 2.9 | 0.012 | 2.09 | 0.0 | 0.10 | 11.96 | 0.01 | 2.556 | 0.00 | 0.00 | 2.3 | 96.3 | 1.4 | -1.19 | 0.34 | 0.72 | 5.41 | 2.8 | 0.003 | 0.63 | 0.0 | 0.05 | 15.65 | 0.00 | 2.366 | 4.13 | 1.01 | 2.7 | 97.3 | 0.0 | -1.58 | 1.60 | 0.38 | 0.78 | 4.37 | 7032 | 450 | 6 | 0 | 0 | 0 | 3588 | logfile |
✔ | 7ELH | 31183 | 2023-09-30 | 2021-04-11 | 3.3 | 3.97 | — | 3.7 | 0.006 | 0.82 | 1.0 | 0.05 | 12.97 | 0.00 | 1.043 | 9.19 | 0.21 | 3.9 | 96.1 | 0.1 | 0.36 | 0.35 | 0.69 | 3.16 | 3.6 | 0.003 | 0.51 | 0.0 | 0.04 | 14.69 | 0.00 | 1.859 | 28.25 | 0.29 | 3.7 | 96.3 | 0.0 | 1.24 | 1.15 | 0.38 | 0.89 | 2.53 | 114995 | 13378 | 27 | 310 | 1 | 0 | 3098 | logfile |
✔ | 7XiZ | 33213 | 2023-09-27 | 2022-04-14 | 3.74 | 3.27 | 3.81 | 3.1 | 0.013 | 1.11 | 0.0 | 0.06 | 17.48 | 0.01 | 2.386 | 4.94 | 0.00 | 12.8 | 86.4 | 0.8 | -3.37 | 0.35 | 0.71 | 1.78 | 3.1 | 0.004 | 0.81 | 0.0 | 0.05 | 17.83 | 0.01 | 2.218 | 16.22 | 1.70 | 16.6 | 82.6 | 0.8 | -3.61 | 1.54 | 0.37 | 0.74 | 1.40 | 2161 | 267 | 1 | 0 | 2 | 0 | 0 | logfile |
✔ | 6M7D | 30129 | 2023-09-27 | 2020-03-18 | 2.9 | 2.82 | — | 2.8 | 0.010 | 1.03 | 0.0 | 0.07 | 13.84 | 0.00 | 2.157 | 15.48 | 0.58 | 2.4 | 97.6 | 0.0 | -0.46 | 0.35 | 0.86 | 4.08 | 2.8 | 0.002 | 0.51 | 0.0 | 0.04 | 15.72 | 0.00 | 2.232 | 8.89 | 1.46 | 1.5 | 98.5 | 0.0 | 2.16 | 0.85 | 0.34 | 0.88 | 3.05 | 3280 | 412 | 2 | 6 | 0 | 0 | 0 | logfile |
✔ | 7ELL | 31184 | 2023-09-29 | 2021-04-12 | 3.8 | 4.24 | — | 3.8 | 0.006 | 0.86 | 1.0 | 0.05 | 14.83 | 0.01 | 1.176 | 17.74 | 0.62 | 8.9 | 90.9 | 0.2 | -2.13 | 0.35 | 0.86 | 1.77 | 3.8 | 0.005 | 0.77 | 0.0 | 0.05 | 15.99 | 0.00 | 2.030 | 12.91 | 0.40 | 4.8 | 95.1 | 0.1 | -0.02 | 1.31 | 0.34 | 0.88 | 1.94 | 60584 | 7917 | 31 | 0 | 10 | 0 | 0 | logfile |
✔ | 7QKJ | 14044 | 2023-09-28 | 2021-12-17 | 3.26 | 3.08 | 3.11 | 3.2 | 0.012 | 2.04 | 12.0 | 0.16 | 11.59 | 0.01 | 2.510 | 0.21 | 0.00 | 9.9 | 90.1 | 0.0 | -2.24 | 0.35 | 0.71 | 3.92 | 3.2 | 0.005 | 0.79 | 0.0 | 0.05 | 15.54 | 0.00 | 2.135 | 10.82 | 0.25 | 7.9 | 92.1 | 0.0 | -2.54 | 1.07 | 0.36 | 0.85 | 3.02 | 6888 | 900 | 12 | 0 | 0 | 0 | 0 | logfile |
✔ | 8JMT | 36426 | 2023-09-27 | 2023-06-05 | 3.3 | 3.55 | 3.41 | 3.7 | 0.003 | 0.74 | 0.0 | 0.04 | 14.38 | 0.00 | 2.204 | 8.56 | 0.00 | 3.5 | 96.5 | 0.0 | -0.01 | 0.35 | 0.59 | 1.38 | 3.7 | 0.004 | 0.65 | 0.0 | 0.04 | 16.13 | 0.00 | 2.238 | 11.67 | 0.00 | 4.0 | 96.0 | 0.0 | 1.51 | 1.16 | 0.33 | 0.61 | 0.92 | 1894 | 234 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 8FUV | 29481 | 2023-09-30 | 2023-01-18 | 3.1 | 3.21 | 2.89 | 3.1 | 0.003 | 0.59 | 0.0 | 0.04 | 12.83 | 0.00 | 2.169 | 5.52 | 0.00 | 5.6 | 94.4 | 0.0 | -0.17 | 0.36 | 0.86 | 3.59 | 3.1 | 0.005 | 0.64 | 0.0 | 0.05 | 14.38 | 0.01 | 2.155 | 6.80 | 0.28 | 5.5 | 94.0 | 0.4 | -0.61 | 1.17 | 0.37 | 0.89 | 3.77 | 10170 | 1368 | 7 | 0 | 0 | 0 | 0 | logfile |
✔ | 8Q7P | 18228 | 2023-09-27 | 2023-08-16 | 3.28 | 3.24 | 3.20 | 3.3 | 0.011 | 1.82 | 0.0 | 0.09 | 11.62 | 0.01 | 2.479 | 0.00 | 0.00 | 1.4 | 98.6 | 0.0 | -1.91 | 0.36 | 0.78 | 5.16 | 3.3 | 0.006 | 0.69 | 0.0 | 0.05 | 16.90 | 0.00 | 2.209 | 7.08 | 1.79 | 1.6 | 98.4 | 0.0 | -2.12 | 1.47 | 0.42 | 0.87 | 5.25 | 3402 | 450 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 6TJo | 10512 | 2023-09-27 | 2019-11-26 | 3.2 | 3.43 | 2.57 | 3.5 | 0.013 | 1.18 | 0.0 | 0.07 | 9.67 | 0.01 | 2.394 | 2.20 | 0.00 | 12.7 | 87.3 | 0.0 | -4.63 | 0.36 | 0.76 | 4.64 | 3.5 | 0.003 | 0.74 | 0.0 | 0.05 | 12.71 | 0.00 | 2.308 | 6.81 | 0.00 | 5.4 | 94.6 | 0.0 | -3.46 | 1.41 | 0.34 | 0.75 | 4.46 | 2439 | 321 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 7N5F | 24188 | 2023-09-27 | 2021-06-05 | 2.7 | 2.27 | 2.74 | 2.0 | 0.023 | 1.50 | 0.0 | 0.10 | 9.99 | 0.01 | 2.468 | 0.16 | 0.00 | 1.3 | 98.7 | 0.0 | 1.68 | 0.36 | 0.75 | 3.32 | 1.7 | 0.003 | 0.57 | 0.0 | 0.04 | 17.55 | 0.00 | 2.307 | 7.74 | 1.59 | 1.6 | 98.4 | 0.0 | 2.51 | 0.79 | 0.36 | 0.78 | 3.13 | 3037 | 386 | 1 | 0 | 1 | 0 | 0 | logfile |
✔ | 6HD5 | 0201 | 2023-09-29 | 2018-08-17 | 4.8 | 6.01 | — | 5.9 | 0.001 | 0.40 | 0.0 | 0.03 | 8.70 | 0.00 | 2.289 | 4.36 | 0.10 | 10.5 | 88.4 | 1.1 | -1.81 | 0.36 | 0.32 | — | 5.9 | 0.004 | 0.81 | 0.0 | 0.04 | 11.92 | 0.01 | 2.072 | 21.86 | 0.00 | 6.4 | 93.5 | 0.1 | -0.40 | 2.04 | 0.46 | 0.56 | — | 9707 | 1234 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 7YNG | 33961 | 2023-09-27 | 2022-07-30 | 3.1 | 3.08 | 2.33 | 3.4 | 0.009 | 0.85 | 0.0 | 0.06 | 13.71 | 0.00 | 2.192 | 9.66 | 0.00 | 10.4 | 89.6 | 0.0 | -4.25 | 0.36 | 0.76 | 3.68 | 3.4 | 0.002 | 0.51 | 0.0 | 0.05 | 14.89 | 0.00 | 2.286 | 6.32 | 0.00 | 4.9 | 95.1 | 0.0 | -1.98 | 0.36 | 0.34 | 0.74 | 3.39 | 2628 | 378 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 6QJH | 4563 | 2023-09-27 | 2019-01-24 | 3.3 | 3.70 | 2.77 | 3.6 | 0.012 | 1.21 | 3.0 | 0.10 | 14.39 | 0.01 | 2.673 | 1.49 | 1.96 | 7.0 | 93.0 | 0.0 | -3.22 | 0.36 | 0.83 | 2.97 | 3.6 | 0.003 | 0.65 | 0.0 | 0.05 | 15.68 | 0.00 | 2.258 | 4.48 | 0.00 | 2.3 | 97.7 | 0.0 | -2.63 | 1.57 | 0.30 | 0.77 | 2.79 | 1302 | 177 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 5A63 | 3061 | 2023-09-30 | 2015-06-24 | 3.4 | 3.50 | 3.42 | 3.5 | 0.010 | 1.69 | 8.0 | 0.11 | 19.07 | 0.01 | 2.079 | 39.51 | 13.74 | 6.4 | 91.5 | 2.1 | -0.17 | 0.36 | 0.40 | 2.09 | 3.5 | 0.003 | 0.76 | 0.0 | 0.04 | 17.76 | 0.00 | 2.217 | 12.14 | 1.05 | 5.5 | 94.1 | 0.3 | 0.06 | 3.24 | 0.62 | 0.82 | 1.80 | 10003 | 1223 | 13 | 0 | 22 | 0 | 0 | logfile |
✔ | 7ZH7 | 14726 | 2023-09-30 | 2022-04-05 | 3.3 | 3.52 | 2.56 | 3.5 | 0.003 | 0.74 | 0.0 | 0.05 | 11.41 | 0.01 | 2.267 | 3.63 | 0.00 | 2.7 | 97.3 | 0.0 | -4.42 | 0.36 | 0.78 | 5.27 | 3.5 | 0.006 | 0.70 | 0.0 | 0.05 | 14.83 | 0.00 | 1.932 | 8.64 | 0.18 | 12.3 | 87.7 | 0.0 | -4.53 | 1.32 | 0.40 | 0.82 | 5.42 | 11520 | 760 | 10 | 0 | 0 | 0 | 5390 | logfile |
✔ | 5U1D | 8482 | 2023-09-28 | 2016-11-28 | 3.97 | 4.06 | — | 4.3 | 0.007 | 1.17 | 0.0 | 0.05 | 12.05 | 0.00 | 2.452 | 0.07 | 0.84 | 5.7 | 94.1 | 0.2 | -2.16 | 0.36 | 0.48 | 1.30 | 4.1 | 0.004 | 0.78 | 0.0 | 0.04 | 15.89 | 0.00 | 2.058 | 14.10 | 0.51 | 4.7 | 95.2 | 0.1 | 0.93 | 1.07 | 0.52 | 0.75 | 1.63 | 7815 | 1168 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 8H9N | 34574 | 2023-09-27 | 2022-10-25 | 3.56 | 3.82 | 3.61 | 3.7 | 0.007 | 0.88 | 0.0 | 0.05 | 15.25 | 0.01 | 2.178 | 14.62 | 0.00 | 5.6 | 94.4 | 0.0 | -2.28 | 0.36 | 0.77 | 1.69 | 3.7 | 0.004 | 0.77 | 0.0 | 0.04 | 17.66 | 0.01 | 2.263 | 10.59 | 1.41 | 5.1 | 94.9 | 0.0 | 2.40 | 1.17 | 0.37 | 0.77 | 1.69 | 3381 | 421 | 3 | 0 | 0 | 0 | 0 | logfile |