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Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 8D9N | 27267 | 2024-03-11 | 2022-06-10 | 4.4 | 4.74 | 3.88 | 34.0 | 0.003 | 0.60 | 0.0 | 0.04 | 13.21 | 0.00 | 2.107 | 2.77 | 0.38 | 5.8 | 94.2 | 0.0 | -0.81 | 0.28 | -0.07 | — | 20.0 | 0.002 | 0.66 | 0.0 | 0.04 | 13.37 | 0.00 | 2.199 | 4.56 | 0.00 | 5.3 | 94.7 | 0.0 | 0.51 | 0.56 | 0.36 | -0.05 | — | 7186 | 902 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 8RB7 | 19027 | 2024-03-10 | 2023-12-03 | 3.2 | 3.80 | 3.05 | 3.8 | 0.014 | 1.83 | 0.0 | 0.10 | 14.96 | 0.02 | 2.398 | 0.86 | 0.96 | 4.2 | 95.8 | 0.0 | -1.02 | 0.28 | 0.71 | 1.70 | 3.8 | 0.003 | 0.56 | 0.0 | 0.03 | 17.84 | 0.01 | 2.007 | 8.72 | 0.96 | 2.5 | 97.5 | 0.0 | 2.16 | 2.08 | 0.28 | 0.76 | 1.47 | 5848 | 360 | 2 | 0 | 0 | 0 | 2948 | logfile |
✔ | 7ABK | 11698 | 2024-03-10 | 2020-09-07 | 3.6 | 4.10 | 3.49 | 3.9 | 0.004 | 0.66 | 0.0 | 0.04 | 16.30 | 0.00 | 2.315 | 5.67 | 1.23 | 1.5 | 98.5 | 0.0 | 0.91 | 0.28 | 0.87 | 1.10 | 3.9 | 0.003 | 0.61 | 0.0 | 0.03 | 19.21 | 0.00 | 2.250 | 5.35 | 3.70 | 2.1 | 97.9 | 0.0 | 5.10 | 1.54 | 0.28 | 0.86 | 1.35 | 1574 | 196 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 6L4S | 0833 | 2024-03-10 | 2019-10-21 | 3.37 | 3.47 | — | 4.0 | 0.014 | 1.36 | 0.0 | 0.09 | 10.28 | 0.01 | 2.408 | 7.28 | 0.00 | 5.7 | 94.3 | 0.0 | -3.73 | 0.28 | 0.67 | 4.12 | 4.1 | 0.003 | 0.65 | 0.0 | 0.05 | 14.65 | 0.00 | 2.267 | 8.57 | 8.33 | 5.7 | 94.3 | 0.0 | -3.42 | 3.09 | 0.32 | 0.72 | 2.44 | 2268 | 330 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 7UiU | 26553 | 2024-03-10 | 2022-03-29 | 2.8 | 3.11 | 2.72 | 3.1 | 0.004 | 0.62 | 0.0 | 0.04 | 13.60 | 0.00 | 2.356 | 3.35 | 0.00 | 4.8 | 95.2 | 0.0 | -2.09 | 0.28 | 0.82 | 1.99 | 3.3 | 0.004 | 0.96 | 0.0 | 0.04 | 16.77 | 0.00 | 2.227 | 11.74 | 3.33 | 6.0 | 94.0 | 0.0 | -2.10 | 1.37 | 0.28 | 0.89 | 2.72 | 607 | 85 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 8FD5 | 29002 | 2024-03-10 | 2022-12-02 | 4.57 | 4.19 | — | 10.0 | 0.016 | 2.15 | 4.0 | 0.13 | 13.14 | 0.02 | 2.541 | 0.16 | 0.29 | 3.8 | 96.2 | 0.0 | -1.38 | 0.28 | 0.02 | — | 3.6 | 0.002 | 0.67 | 0.0 | 0.04 | 13.21 | 0.01 | 2.134 | 9.88 | 0.00 | 6.0 | 94.0 | 0.0 | -1.15 | 1.23 | 0.39 | 0.12 | — | 3214 | 419 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 8Q8E | 18252 | 2024-03-11 | 2023-08-18 | 3.81 | 3.69 | 3.74 | 3.9 | 0.012 | 2.01 | 6.0 | 0.11 | 11.64 | 0.01 | 1.524 | 5.19 | 0.00 | 9.0 | 91.0 | 0.0 | -2.95 | 0.28 | 0.52 | 2.07 | 4.0 | 0.003 | 0.80 | 0.0 | 0.05 | 15.19 | 0.01 | 2.133 | 12.17 | 6.15 | 6.8 | 93.2 | 0.0 | -3.35 | 1.88 | 0.35 | 0.78 | 2.71 | 6810 | 894 | 12 | 0 | 0 | 0 | 0 | logfile |
✔ | 5MPE | 3535 | 2024-03-24 | 2016-12-16 | 4.5 | 4.55 | — | 4.5 | 0.034 | 3.32 | 297.0 | 0.19 | 17.16 | 0.03 | 1.158 | 3.96 | 2.25 | 5.2 | 92.6 | 2.2 | -1.86 | 0.28 | 0.39 | — | 4.5 | 0.003 | 0.81 | 0.0 | 0.04 | 14.85 | 0.00 | 2.037 | 19.65 | 0.09 | 5.9 | 93.8 | 0.3 | -0.74 | 2.46 | 0.35 | 0.67 | — | 40974 | 5142 | 13 | 0 | 0 | 0 | 0 | logfile |
✔ | 8Q9i | 18282 | 2024-03-10 | 2023-08-20 | 2.56 | 2.01 | 2.38 | 2.2 | 0.011 | 1.80 | 0.0 | 0.08 | 11.44 | 0.01 | 2.520 | 0.00 | 0.00 | 3.8 | 96.2 | 0.0 | -1.34 | 0.29 | 0.75 | 7.51 | 2.3 | 0.002 | 0.54 | 0.0 | 0.05 | 17.12 | 0.00 | 2.250 | 1.47 | 0.52 | 0.9 | 99.1 | 0.0 | -1.52 | 1.49 | 0.37 | 0.86 | 7.22 | 3411 | 219 | 3 | 0 | 0 | 0 | 1740 | logfile |
✔ | 8Q8Z | 18266 | 2024-03-11 | 2023-08-19 | 3.16 | 3.15 | 3.34 | 3.2 | 0.011 | 1.88 | 0.0 | 0.08 | 10.80 | 0.01 | 2.522 | 0.00 | 0.00 | 4.6 | 95.4 | 0.0 | -2.15 | 0.29 | 0.75 | 6.08 | 3.2 | 0.003 | 0.52 | 0.0 | 0.05 | 13.80 | 0.00 | 2.011 | 4.41 | 0.25 | 1.1 | 98.9 | 0.0 | -1.26 | 2.96 | 0.33 | 0.85 | 5.45 | 7032 | 450 | 6 | 0 | 0 | 0 | 3588 | logfile |
✔ | 8GWB | 34308 | 2024-03-18 | 2022-09-16 | 2.75 | 2.95 | 2.85 | 25.0 | 0.009 | 1.07 | 1.0 | 0.05 | 17.30 | 0.01 | 1.556 | 16.84 | 2.25 | 7.5 | 92.3 | 0.2 | -2.40 | 0.29 | 0.01 | 0.23 | 25.0 | 0.004 | 0.81 | 0.0 | 0.04 | 17.94 | 0.01 | 1.944 | 21.98 | 3.71 | 9.2 | 90.7 | 0.1 | -1.83 | 1.62 | 0.36 | 0.18 | 0.12 | 21879 | 2655 | 16 | 54 | 10 | 7 | 0 | logfile |
✔ | 7U12 | 26275 | 2024-03-10 | 2022-02-19 | 3.5 | 3.59 | — | 4.4 | 0.011 | 1.06 | 0.0 | 0.07 | 16.72 | 0.01 | 2.160 | 20.06 | 5.51 | 8.0 | 92.0 | 0.0 | -3.00 | 0.29 | 0.45 | 2.77 | 4.3 | 0.004 | 0.82 | 0.0 | 0.06 | 15.16 | 0.00 | 2.205 | 11.72 | 3.94 | 9.3 | 90.7 | 0.0 | -3.74 | 2.89 | 0.33 | 0.56 | 2.09 | 3456 | 405 | 6 | 0 | 12 | 0 | 0 | logfile |
✔ | 7M3L | 23656 | 2024-03-10 | 2021-03-18 | 3.2 | 4.99 | — | 3.3 | 0.009 | 0.97 | 0.0 | 0.06 | 15.05 | 0.01 | 1.551 | 6.78 | 0.30 | 9.1 | 90.6 | 0.3 | -3.19 | 0.29 | 0.38 | 0.40 | 3.1 | 0.004 | 0.76 | 0.0 | 0.04 | 15.43 | 0.00 | 2.143 | 17.65 | 2.11 | 8.6 | 91.3 | 0.1 | -1.11 | 3.79 | 0.46 | 0.76 | 2.18 | 6113 | 775 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 8RB5 | 19026 | 2024-03-11 | 2023-12-03 | 3.3 | 3.79 | 3.44 | 3.7 | 0.012 | 1.72 | 0.0 | 0.08 | 14.63 | 0.01 | 2.585 | 0.34 | 0.64 | 2.2 | 97.8 | 0.0 | -2.05 | 0.29 | 0.74 | 1.91 | 3.7 | 0.002 | 0.55 | 0.0 | 0.03 | 17.49 | 0.00 | 2.233 | 8.44 | 1.71 | 2.4 | 97.6 | 0.0 | 2.04 | 1.43 | 0.30 | 0.80 | 2.10 | 8772 | 540 | 3 | 0 | 0 | 0 | 4422 | logfile |
✔ | 7U11 | 26274 | 2024-03-10 | 2022-02-19 | 3.2 | 2.77 | — | 3.4 | 0.006 | 0.73 | 0.0 | 0.06 | 17.79 | 0.00 | 2.186 | 14.68 | 2.36 | 6.0 | 94.0 | 0.0 | -2.79 | 0.29 | 0.64 | 3.31 | 3.4 | 0.004 | 0.78 | 0.0 | 0.06 | 17.99 | 0.00 | 2.209 | 10.90 | 1.31 | 8.3 | 91.7 | 0.0 | -3.51 | 0.96 | 0.34 | 0.70 | 3.20 | 3456 | 405 | 6 | 0 | 12 | 0 | 0 | logfile |
✔ | 7U16 | 26279 | 2024-03-10 | 2022-02-19 | 2.7 | 3.30 | — | 3.5 | 0.004 | 0.62 | 0.0 | 0.06 | 16.84 | 0.00 | 2.310 | 8.58 | 0.00 | 6.8 | 93.2 | 0.0 | -2.67 | 0.29 | 0.68 | 2.62 | 3.5 | 0.003 | 0.58 | 0.0 | 0.05 | 14.47 | 0.00 | 2.180 | 7.27 | 1.31 | 4.8 | 95.2 | 0.0 | -2.62 | 1.34 | 0.36 | 0.80 | 4.68 | 3456 | 405 | 6 | 0 | 12 | 0 | 0 | logfile |
✔ | 8Q9L | 18285 | 2024-03-15 | 2023-08-20 | 2.76 | 2.36 | 2.64 | 2.6 | 0.011 | 1.76 | 0.0 | 0.09 | 11.63 | 0.01 | 2.537 | 0.00 | 0.00 | 1.6 | 98.4 | 0.0 | -1.68 | 0.29 | 0.76 | 6.43 | 2.6 | 0.002 | 0.51 | 0.0 | 0.05 | 17.45 | 0.00 | 2.055 | 2.15 | 0.87 | 1.3 | 98.7 | 0.0 | -2.16 | 1.43 | 0.37 | 0.86 | 6.69 | 10233 | 657 | 9 | 0 | 0 | 0 | 5220 | logfile |
✔ | 8P34 | 17383 | 2024-03-10 | 2023-05-17 | 2.61 | 2.80 | 2.24 | 2.8 | 0.009 | 1.32 | 0.0 | 0.08 | 11.05 | 0.01 | 2.651 | 0.69 | 0.00 | 5.4 | 94.6 | 0.0 | -1.84 | 0.29 | 0.90 | 7.34 | 2.8 | 0.003 | 0.53 | 0.0 | 0.05 | 13.66 | 0.00 | 2.674 | 0.69 | 1.23 | 4.3 | 95.7 | 0.0 | -1.62 | 0.28 | 0.28 | 0.88 | 6.38 | 711 | 94 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 8Q8W | 18263 | 2024-03-11 | 2023-08-19 | 2.85 | 2.92 | 2.74 | 2.9 | 0.011 | 1.75 | 0.0 | 0.09 | 11.10 | 0.01 | 2.483 | 0.00 | 0.00 | 2.9 | 97.1 | 0.0 | -1.38 | 0.29 | 0.78 | 6.35 | 2.9 | 0.002 | 0.47 | 0.0 | 0.05 | 15.76 | 0.00 | 2.331 | 0.91 | 0.54 | 0.7 | 99.3 | 0.0 | -0.61 | 1.98 | 0.39 | 0.89 | 6.58 | 6618 | 429 | 6 | 0 | 0 | 0 | 3372 | logfile |
✔ | 8Q2J | 18109 | 2024-03-10 | 2023-08-02 | 2.23 | 2.02 | 2.19 | 2.2 | 0.011 | 1.72 | 0.0 | 0.08 | 11.08 | 0.01 | 2.490 | 0.14 | 0.00 | 1.8 | 98.2 | 0.0 | -1.62 | 0.29 | 0.75 | 7.51 | 2.2 | 0.004 | 0.61 | 0.0 | 0.05 | 17.29 | 0.00 | 2.248 | 4.07 | 1.50 | 0.4 | 99.6 | 0.0 | -1.99 | 0.90 | 0.44 | 0.90 | 7.16 | 3507 | 462 | 6 | 0 | 0 | 0 | 0 | logfile |