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Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 7X2A | 32963 | 2023-04-29 | 2022-02-25 | 2.49 | 2.71 | — | 1.8 | 0.013 | 1.51 | 6.0 | 0.11 | 12.93 | 0.00 | 1.682 | 6.97 | 6.68 | 2.2 | 97.6 | 0.2 | 2.33 | 0.57 | 0.42 | 1.04 | 1.8 | 0.004 | 0.80 | 0.0 | 0.05 | 15.31 | 0.00 | 2.027 | 14.46 | 2.07 | 3.8 | 96.2 | 0.1 | -0.27 | 1.78 | 0.82 | 0.79 | 2.19 | 26800 | 3486 | 5 | 0 | 0 | 0 | 0 | logfile |
✔ | 6JXA | 9892 | 2023-04-23 | 2019-04-23 | 4.3 | 4.65 | — | 4.2 | 0.017 | 1.81 | 3.0 | 0.10 | 9.08 | 0.01 | 1.926 | 29.72 | 2.04 | 12.2 | 79.3 | 8.5 | -2.72 | 0.49 | 0.42 | — | 4.2 | 0.005 | 1.04 | 0.0 | 0.05 | 11.62 | 0.01 | 2.085 | 25.04 | 0.00 | 17.4 | 79.8 | 2.8 | -2.41 | 0.95 | 0.65 | 0.59 | — | 14100 | 2244 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 8D6X | 27225 | 2023-04-25 | 2022-06-06 | 3.2 | 10.22 | — | — | 0.003 | 0.62 | 0.0 | 0.04 | 12.14 | 0.00 | 2.195 | 17.76 | 0.06 | 2.6 | 97.4 | 0.0 | 1.17 | 0.70 | 0.42 | 0.14 | — | 0.003 | 0.68 | 0.0 | 0.04 | 14.52 | 0.00 | 2.006 | 31.08 | 0.17 | 4.9 | 95.1 | 0.0 | 0.20 | 4.65 | 0.78 | 0.54 | 0.09 | 68362 | 8957 | 41 | 0 | 0 | 0 | 0 | logfile |
✔ | 7WD9 | 32435 | 2023-04-26 | 2021-12-21 | 3.7 | 4.02 | — | 3.8 | 0.003 | 0.46 | 0.0 | 0.04 | 7.35 | 0.00 | 1.967 | 2.78 | 0.00 | 4.2 | 95.6 | 0.1 | -1.79 | 0.57 | 0.42 | 0.74 | 3.8 | 0.003 | 0.64 | 0.0 | 0.04 | 13.62 | 0.00 | 1.877 | 11.74 | 0.23 | 5.5 | 94.4 | 0.1 | -0.85 | 1.33 | 0.75 | 0.68 | 1.07 | 69720 | 4533 | 9 | 0 | 0 | 0 | 34404 | logfile |
✔ | 6FU8 | 4319 | 2023-04-19 | 2018-02-26 | 3.2 | 4.43 | 2.98 | 3.8 | 0.013 | 2.11 | 2.0 | 0.10 | 20.18 | 0.02 | 2.617 | 1.47 | 2.78 | 11.2 | 86.2 | 2.5 | -3.87 | 0.17 | 0.42 | 2.23 | 4.1 | 0.004 | 0.85 | 0.0 | 0.04 | 15.02 | 0.00 | 2.243 | 16.86 | 0.00 | 11.2 | 87.5 | 1.2 | -1.85 | 3.09 | 0.23 | 0.62 | -0.89 | 1364 | 82 | 1 | 0 | 0 | 0 | 711 | logfile |
✔ | 7NK2 | 12429 | 2023-04-28 | 2021-02-17 | 4.84 | 4.93 | — | 4.8 | 0.004 | 0.73 | 2.0 | 0.05 | 13.61 | 0.01 | 1.907 | 8.81 | 0.32 | 4.3 | 95.7 | 0.0 | -0.71 | 0.61 | 0.43 | — | 4.8 | 0.005 | 0.80 | 0.0 | 0.04 | 13.93 | 0.01 | 1.842 | 25.56 | 0.00 | 9.2 | 90.8 | 0.0 | -1.77 | 4.62 | 0.74 | 0.69 | — | 28776 | 1794 | 6 | 23 | 0 | 0 | 13868 | logfile |
✔ | 7JGF | 22325 | 2023-04-20 | 2020-07-19 | 4.69 | 4.81 | — | 4.8 | 0.002 | 0.62 | 0.0 | 0.04 | 13.16 | 0.01 | 2.109 | 26.74 | 0.41 | 4.6 | 95.4 | 0.0 | -0.87 | 0.39 | 0.43 | — | 4.8 | 0.002 | 0.47 | 0.0 | 0.04 | 13.18 | 0.00 | 2.190 | 46.28 | 0.41 | 4.8 | 95.2 | 0.0 | 1.10 | 0.62 | 0.41 | 0.45 | — | 4477 | 532 | 1 | 0 | 0 | 0 | 30 | logfile |
✘ | 5ZWM | 6972 | 2023-04-21 | 2018-05-16 | 3.4 | 3.37 | — | 3.3 | 0.007 | 1.15 | 10.0 | 0.06 | 12.54 | 0.01 | 1.786 | 18.95 | 0.72 | 5.9 | 93.5 | 0.6 | -3.22 | 0.51 | 0.43 | 1.06 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 111041 | 12858 | 61 | 634 | 8 | 0 | 0 | logfile |
✔ | 6XTB | 10618 | 2023-04-19 | 2020-01-15 | 4.3 | 4.32 | — | 3.9 | 0.006 | 1.17 | 0.0 | 0.07 | 8.68 | 0.00 | 2.369 | 3.00 | 0.00 | 15.6 | 84.4 | 0.0 | -4.66 | 0.32 | 0.43 | — | 4.1 | 0.005 | 1.12 | 0.0 | 0.05 | 9.13 | 0.00 | 2.119 | 10.22 | 0.00 | 25.1 | 74.9 | 0.0 | -5.72 | 2.48 | 0.34 | 0.65 | — | 1161 | 235 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 8EXP | 28658 | 2023-04-21 | 2022-10-25 | 4.2 | 4.47 | 4.29 | 4.6 | 0.019 | 1.74 | 0.0 | 0.10 | 10.69 | 0.01 | 2.031 | 5.52 | 0.60 | 3.4 | 96.4 | 0.2 | -0.04 | 0.53 | 0.43 | — | 4.6 | 0.003 | 0.70 | 0.0 | 0.04 | 13.28 | 0.00 | 2.061 | 14.99 | 0.00 | 4.7 | 95.3 | 0.0 | 0.30 | 1.14 | 0.64 | 0.70 | — | 9024 | 1078 | 4 | 0 | 2 | 0 | 0 | logfile |
✔ | 5A8L | 3099 | 2023-04-22 | 2015-07-16 | 3.8 | 3.60 | — | 3.5 | 0.004 | 0.67 | 0.0 | 0.02 | 12.36 | 0.00 | 1.435 | 8.96 | 0.95 | 10.3 | 86.8 | 2.9 | -2.06 | 0.18 | 0.43 | 0.47 | 3.5 | 0.005 | 0.82 | 0.0 | 0.04 | 17.26 | 0.01 | 2.034 | 19.30 | 1.33 | 10.7 | 88.1 | 1.1 | -2.35 | 1.54 | 0.23 | 0.63 | 0.72 | 12264 | 624 | 9 | 347 | 0 | 0 | 0 | logfile |
✔ | 7XZZ | 33535 | 2023-04-24 | 2022-06-03 | 4.07 | 5.32 | 3.99 | 4.6 | 0.006 | 0.92 | 0.0 | 0.06 | 25.15 | 0.00 | 1.717 | 11.14 | 0.15 | 1.7 | 98.3 | 0.0 | 0.69 | 0.70 | 0.43 | — | 4.6 | 0.003 | 0.66 | 0.0 | 0.04 | 25.57 | 0.00 | 2.008 | 13.06 | 0.07 | 1.6 | 98.4 | 0.0 | 1.28 | 0.88 | 0.87 | 0.80 | — | 18623 | 1554 | 14 | 310 | 0 | 0 | 0 | logfile |
✔ | 6PB6 | 20288 | 2023-04-26 | 2019-06-13 | 4.29 | 5.03 | — | 4.3 | 0.010 | 1.13 | 0.0 | 0.05 | 16.04 | 0.01 | 1.968 | 10.82 | 0.11 | 10.6 | 89.1 | 0.3 | -4.79 | 0.68 | 0.43 | — | 4.3 | 0.003 | 0.68 | 0.0 | 0.04 | 16.93 | 0.00 | 1.881 | 17.30 | 0.00 | 8.7 | 91.3 | 0.1 | -2.58 | 0.93 | 0.83 | 0.74 | — | 69824 | 4091 | 13 | 156 | 5 | 0 | 34388 | logfile |
✘ | 6KN8 | 0729 | 2023-04-21 | 2019-08-03 | 4.8 | 8.89 | — | 8.4 | 0.019 | 1.81 | 10.0 | 0.10 | 12.39 | 0.01 | 2.211 | 9.21 | 0.41 | 2.0 | 97.4 | 0.5 | -0.24 | 0.74 | 0.43 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 60966 | 7669 | 44 | 0 | 15 | 0 | 0 | logfile |
✔ | 6PMJ | 20395 | 2023-04-21 | 2019-07-02 | 3.91 | 5.34 | — | 4.4 | 0.011 | 1.21 | 0.0 | 0.06 | 15.82 | 0.01 | 2.011 | 11.04 | 0.31 | 10.4 | 89.3 | 0.3 | -4.41 | 0.67 | 0.43 | 0.20 | 4.4 | 0.003 | 0.71 | 0.0 | 0.04 | 17.51 | 0.00 | 1.817 | 21.36 | 0.34 | 8.4 | 91.4 | 0.1 | -2.26 | 1.66 | 0.89 | 0.77 | 0.03 | 57984 | 3453 | 10 | 110 | 4 | 0 | 28609 | logfile |
✔ | 6PB4 | 20286 | 2023-04-26 | 2019-06-13 | 4.35 | 5.03 | — | 4.3 | 0.010 | 1.16 | 0.0 | 0.06 | 16.29 | 0.01 | 1.840 | 11.04 | 0.06 | 11.5 | 88.1 | 0.4 | -4.77 | 0.69 | 0.43 | — | 4.2 | 0.003 | 0.68 | 0.0 | 0.04 | 16.64 | 0.00 | 1.509 | 17.65 | 0.00 | 8.8 | 91.1 | 0.2 | -2.71 | 1.23 | 0.83 | 0.73 | — | 69922 | 4091 | 14 | 158 | 6 | 0 | 34409 | logfile |
✔ | 6YRK | 10890 | 2023-04-29 | 2020-04-20 | 4.1 | 4.59 | — | 4.0 | 0.014 | 1.85 | 13.0 | 0.12 | 18.90 | 0.01 | 2.473 | 6.64 | 12.77 | 6.4 | 93.2 | 0.5 | -2.49 | 0.68 | 0.44 | — | 4.1 | 0.003 | 0.72 | 0.0 | 0.04 | 14.01 | 0.00 | 2.124 | 20.91 | 0.00 | 5.0 | 94.9 | 0.1 | -1.13 | 1.88 | 0.85 | 0.68 | — | 15058 | 1937 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 7MDW | 23782 | 2023-04-20 | 2021-04-06 | 3.58 | 2.25 | 3.45 | 1.5 | 0.002 | 0.55 | 0.0 | 0.04 | 12.65 | 0.00 | 2.293 | 8.46 | 0.00 | 6.5 | 93.5 | 0.0 | -1.58 | 0.52 | 0.44 | 1.65 | 1.5 | 0.005 | 0.79 | 0.0 | 0.05 | 15.12 | 0.00 | 2.071 | 19.80 | 0.56 | 13.5 | 86.5 | 0.0 | -3.45 | 1.37 | 0.56 | 0.50 | 1.94 | 3392 | 435 | 4 | 0 | 1 | 0 | 0 | logfile |
✔ | 3J03 | 5138 | 2023-04-21 | 2011-02-10 | 4.8 | 4.09 | — | 6.5 | 0.014 | 1.51 | 16.0 | 0.08 | 13.07 | 0.02 | 2.471 | 3.31 | 1.78 | 3.5 | 96.3 | 0.2 | -1.89 | 0.66 | 0.44 | — | 5.8 | 0.003 | 0.82 | 0.0 | 0.04 | 14.05 | 0.01 | 2.286 | 21.54 | 0.00 | 3.1 | 96.9 | 0.0 | -0.66 | 1.46 | 0.82 | 0.68 | — | 58640 | 7856 | 16 | 0 | 0 | 0 | 0 | logfile |
✔ | 7UiG | 26545 | 2023-04-28 | 2022-03-29 | 4.3 | 8.24 | 4.32 | 3.9 | 0.005 | 0.80 | 0.0 | 0.05 | 12.88 | 0.01 | 0.850 | 11.11 | 0.09 | 1.3 | 98.5 | 0.1 | 1.54 | 0.45 | 0.44 | — | 3.9 | 0.011 | 0.85 | 0.0 | 0.04 | 12.99 | 0.01 | 2.065 | 23.76 | 0.00 | 3.7 | 96.3 | 0.0 | 0.65 | 0.85 | 0.58 | 0.79 | — | 27580 | 3390 | 17 | 0 | 0 | 0 | 0 | logfile |