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Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 7LYP | 23598 | 2023-07-11 | 2021-03-07 | 4.05 | 4.38 | — | 4.1 | 0.013 | 1.73 | 0.0 | 0.09 | 13.10 | 0.01 | 2.509 | 0.28 | 0.71 | 6.7 | 92.7 | 0.6 | -1.22 | 0.82 | 0.81 | — | 4.1 | 0.002 | 0.61 | 0.0 | 0.04 | 12.67 | 0.00 | 2.106 | 8.20 | 0.00 | 4.4 | 95.6 | 0.0 | 0.32 | 1.27 | 0.82 | 0.81 | — | 23504 | 2985 | 6 | 0 | 28 | 0 | 0 | logfile |
✔ | 6MB3 | 9065 | 2023-07-08 | 2018-08-29 | 3.37 | 3.47 | — | 3.4 | 0.020 | 1.75 | 0.0 | 0.09 | 9.45 | 0.01 | 2.273 | 0.28 | 0.00 | 3.7 | 96.1 | 0.1 | 0.34 | 0.73 | 0.86 | 4.52 | 3.4 | 0.003 | 0.66 | 0.0 | 0.04 | 14.01 | 0.00 | 2.193 | 7.66 | 0.23 | 5.5 | 94.4 | 0.0 | 0.04 | 1.27 | 0.74 | 0.88 | 3.63 | 16423 | 2178 | 19 | 0 | 0 | 0 | 0 | logfile |
✔ | 7KDG | 22821 | 2023-07-11 | 2020-10-08 | 3.01 | 3.39 | — | 3.3 | 0.014 | 1.76 | 3.0 | 0.10 | 12.77 | 0.01 | 2.515 | 0.28 | 0.31 | 6.2 | 93.5 | 0.3 | -0.92 | 0.77 | 0.78 | 3.64 | 3.3 | 0.004 | 0.63 | 0.0 | 0.04 | 14.50 | 0.00 | 2.111 | 5.92 | 0.12 | 3.8 | 96.2 | 0.0 | 0.23 | 1.23 | 0.77 | 0.83 | 2.77 | 23700 | 2916 | 21 | 0 | 63 | 0 | 0 | logfile |
✔ | 6WJ5 | 21688 | 2023-07-16 | 2020-04-11 | 3.6 | 3.81 | — | 3.8 | 0.012 | 1.84 | 4.0 | 0.10 | 13.33 | 0.01 | 2.369 | 0.28 | 0.05 | 3.8 | 95.7 | 0.5 | -2.50 | 0.51 | 0.70 | 3.53 | 3.8 | 0.004 | 0.60 | 0.0 | 0.04 | 16.24 | 0.00 | 2.011 | 6.97 | 0.26 | 3.5 | 96.5 | 0.0 | 0.84 | 1.46 | 0.59 | 0.78 | 2.62 | 36320 | 2248 | 8 | 0 | 4 | 0 | 18268 | logfile |
✔ | 8DMB | 27533 | 2023-07-07 | 2022-07-08 | 3.1 | 3.10 | 3.12 | 3.1 | 0.005 | 0.91 | 0.0 | 0.05 | 15.85 | 0.01 | 2.091 | 0.28 | 0.74 | 2.5 | 97.5 | 0.0 | 0.39 | 0.69 | 0.81 | 4.57 | 3.1 | 0.003 | 0.55 | 0.0 | 0.03 | 16.17 | 0.01 | 1.969 | 3.37 | 0.00 | 3.1 | 96.9 | 0.0 | 0.52 | 0.57 | 0.70 | 0.83 | 4.27 | 14225 | 328 | 5 | 275 | 2 | 0 | 5728 | logfile |
✔ | 6WPS | 21864 | 2023-07-13 | 2020-04-27 | 3.1 | 3.36 | 3.25 | 3.3 | 0.013 | 1.34 | 0.0 | 0.09 | 10.40 | 0.01 | 2.364 | 0.29 | 0.10 | 2.4 | 97.6 | 0.0 | 0.67 | 0.73 | 0.74 | 3.01 | 3.3 | 0.003 | 0.63 | 0.0 | 0.04 | 14.78 | 0.00 | 2.061 | 7.88 | 0.14 | 2.9 | 97.1 | 0.0 | -0.01 | 1.66 | 0.78 | 0.82 | 2.91 | 28116 | 3540 | 27 | 0 | 75 | 0 | 0 | logfile |
✔ | 7Z8L | 14556 | 2023-07-08 | 2022-03-17 | 4.9 | 4.50 | 4.38 | 4.0 | 0.012 | 1.30 | 0.0 | 0.09 | 6.41 | 0.01 | 2.296 | 0.29 | 0.00 | 1.2 | 98.8 | 0.0 | 1.37 | 0.76 | 0.77 | — | 4.0 | 0.005 | 0.71 | 0.0 | 0.04 | 7.01 | 0.00 | 1.822 | 7.86 | 0.00 | 6.5 | 93.5 | 0.0 | 0.20 | 0.73 | 0.84 | 0.81 | — | 16513 | 3311 | 3 | 0 | 5 | 0 | 0 | logfile |
✔ | 7L7T | 23218 | 2023-07-07 | 2020-12-30 | 3.7 | 4.14 | 3.63 | 3.9 | 0.023 | 1.69 | 0.0 | 0.16 | 10.29 | 0.01 | 2.419 | 0.30 | 0.00 | 1.2 | 98.8 | 0.0 | 0.98 | 0.85 | 0.85 | 2.90 | 3.8 | 0.005 | 0.65 | 0.0 | 0.04 | 13.99 | 0.00 | 2.225 | 7.63 | 0.32 | 3.2 | 96.8 | 0.0 | 1.05 | 0.75 | 0.85 | 0.85 | 2.52 | 15423 | 1770 | 39 | 0 | 102 | 0 | 0 | logfile |
✔ | 7LYQ | 23599 | 2023-07-11 | 2021-03-07 | 3.34 | 3.59 | — | 3.6 | 0.013 | 1.74 | 1.0 | 0.10 | 12.83 | 0.01 | 2.521 | 0.30 | 0.43 | 5.2 | 94.3 | 0.4 | -0.83 | 0.77 | 0.83 | 3.22 | 3.5 | 0.005 | 0.63 | 0.0 | 0.04 | 14.34 | 0.00 | 2.202 | 5.36 | 0.24 | 3.7 | 96.3 | 0.0 | 0.32 | 1.24 | 0.79 | 0.86 | 2.66 | 23641 | 2985 | 6 | 0 | 38 | 0 | 0 | logfile |
✔ | 7KDK | 22825 | 2023-07-11 | 2020-10-08 | 2.8 | 3.18 | — | 3.1 | 0.014 | 1.78 | 8.0 | 0.10 | 13.03 | 0.01 | 2.490 | 0.30 | 0.12 | 5.2 | 94.7 | 0.1 | -0.98 | 0.75 | 0.77 | 3.89 | 3.1 | 0.003 | 0.60 | 0.0 | 0.04 | 15.29 | 0.00 | 2.146 | 6.89 | 1.49 | 2.8 | 97.2 | 0.0 | 0.33 | 0.66 | 0.72 | 0.80 | 3.19 | 23688 | 2916 | 21 | 0 | 63 | 0 | 0 | logfile |
✔ | 6PZK | 20536 | 2023-07-06 | 2019-08-01 | 3.2 | 3.65 | — | 3.6 | 0.012 | 1.93 | 16.0 | 0.12 | 14.42 | 0.02 | 2.533 | 0.30 | 1.95 | 3.8 | 96.2 | 0.0 | -2.86 | 0.65 | 0.75 | 2.57 | 3.6 | 0.003 | 0.62 | 0.0 | 0.04 | 16.20 | 0.00 | 2.151 | 9.82 | 0.34 | 2.2 | 97.8 | 0.0 | 1.46 | 1.70 | 0.73 | 0.82 | 1.75 | 13153 | 1624 | 5 | 0 | 0 | 0 | 0 | logfile |
✔ | 6VGK | 21197 | 2023-07-09 | 2020-01-08 | 3.1 | 3.32 | — | 3.4 | 0.020 | 1.84 | 0.0 | 0.09 | 9.91 | 0.01 | 2.394 | 0.31 | 0.00 | 3.4 | 95.8 | 0.8 | -0.29 | 0.54 | 0.69 | 4.26 | 3.4 | 0.006 | 0.72 | 0.0 | 0.05 | 14.02 | 0.00 | 2.173 | 9.12 | 0.40 | 4.3 | 95.5 | 0.3 | 1.56 | 0.64 | 0.66 | 0.81 | 3.37 | 19222 | 2513 | 14 | 0 | 0 | 0 | 0 | logfile |
✔ | 8G3o | 29706 | 2023-07-09 | 2023-02-08 | 3.1 | 3.51 | 3.05 | 3.3 | 0.015 | 1.71 | 7.0 | 0.09 | 12.94 | 0.01 | 2.218 | 0.31 | 0.00 | 3.8 | 95.6 | 0.6 | -0.63 | 0.84 | 0.91 | 4.38 | 3.3 | 0.005 | 0.73 | 0.0 | 0.05 | 15.04 | 0.00 | 2.187 | 8.15 | 0.31 | 3.6 | 96.2 | 0.2 | -0.35 | 1.97 | 0.82 | 0.90 | 3.75 | 18487 | 2272 | 38 | 0 | 81 | 0 | 0 | logfile |
✔ | 6ZMS | 11300 | 2023-07-06 | 2020-07-03 | 3.4 | 3.78 | — | 3.8 | 0.019 | 1.98 | 3.0 | 0.10 | 14.13 | 0.01 | 2.427 | 0.32 | 2.12 | 5.6 | 91.4 | 3.0 | -2.88 | 0.40 | 0.72 | 1.84 | 3.7 | 0.004 | 0.64 | 0.0 | 0.04 | 15.70 | 0.00 | 2.031 | 5.57 | 0.14 | 6.2 | 93.4 | 0.4 | -1.93 | 1.76 | 0.35 | 0.84 | 3.57 | 12570 | 818 | 4 | 0 | 0 | 0 | 6173 | logfile |
✔ | 7N5D | 24186 | 2023-07-10 | 2021-06-05 | 2.8 | 2.25 | — | 1.3 | 0.023 | 1.52 | 0.0 | 0.09 | 9.91 | 0.01 | 2.378 | 0.32 | 0.00 | 1.1 | 98.9 | 0.0 | 1.83 | 0.84 | 0.83 | 4.14 | 1.3 | 0.003 | 0.64 | 0.0 | 0.04 | 16.00 | 0.00 | 2.173 | 6.93 | 1.62 | 1.9 | 98.1 | 0.0 | 2.44 | 0.66 | 0.82 | 0.82 | 3.20 | 20593 | 2612 | 14 | 0 | 7 | 0 | 0 | logfile |
✔ | 7TXZ | 26162 | 2023-07-06 | 2022-02-10 | 3.2 | 3.25 | 3.11 | 3.2 | 0.017 | 1.50 | 0.0 | 0.10 | 10.13 | 0.01 | 2.400 | 0.32 | 0.19 | 1.9 | 98.0 | 0.1 | 0.71 | 0.71 | 0.79 | 4.26 | 3.2 | 0.003 | 0.64 | 0.0 | 0.05 | 13.80 | 0.00 | 2.101 | 7.62 | 0.38 | 3.5 | 96.4 | 0.1 | 0.16 | 0.55 | 0.72 | 0.84 | 3.88 | 11303 | 1464 | 22 | 0 | 29 | 0 | 0 | logfile |
✔ | 6C0V | 7325 | 2023-07-05 | 2018-01-02 | 3.4 | 3.67 | — | 3.9 | 0.008 | 1.14 | 0.0 | 0.06 | 12.84 | 0.00 | 1.961 | 0.33 | 0.00 | 4.3 | 95.7 | 0.0 | -2.20 | 0.42 | 0.67 | 2.82 | 3.8 | 0.003 | 0.63 | 0.0 | 0.04 | 16.30 | 0.00 | 1.939 | 7.86 | 0.96 | 2.8 | 97.2 | 0.0 | 1.00 | 1.45 | 0.58 | 0.86 | 2.33 | 8976 | 1154 | 1 | 0 | 4 | 0 | 0 | logfile |
✔ | 6UJB | 20795 | 2023-07-05 | 2019-10-02 | 3.51 | 3.73 | — | 3.6 | 0.014 | 1.45 | 0.0 | 0.08 | 10.93 | 0.01 | 1.782 | 0.33 | 0.00 | 2.7 | 97.3 | 0.0 | 0.55 | 0.77 | 0.83 | 3.18 | 3.6 | 0.004 | 0.61 | 0.0 | 0.05 | 14.67 | 0.00 | 2.140 | 7.36 | 0.11 | 3.5 | 96.5 | 0.0 | -0.10 | 0.73 | 0.79 | 0.85 | 3.00 | 9193 | 1180 | 11 | 0 | 23 | 0 | 0 | logfile |
✘ | 7PMN | 13539 | 2023-07-12 | 2021-09-02 | 3.2 | 3.93 | — | 3.5 | 0.007 | 0.94 | 0.0 | 0.05 | 14.26 | 0.01 | 1.984 | 0.34 | 0.55 | 2.9 | 97.1 | 0.0 | -0.35 | 0.79 | 0.71 | 2.00 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 74640 | 9131 | 28 | 67 | 11 | 0 | 0 | logfile |
✔ | 6X2B | 22000 | 2023-07-10 | 2020-05-20 | 3.6 | 4.27 | 3.73 | 3.9 | 0.012 | 1.74 | 2.0 | 0.09 | 13.17 | 0.01 | 2.530 | 0.34 | 2.08 | 6.7 | 92.9 | 0.4 | -1.71 | 0.77 | 0.76 | 2.50 | 3.9 | 0.003 | 0.59 | 0.0 | 0.04 | 13.26 | 0.00 | 2.164 | 6.09 | 0.05 | 4.0 | 96.0 | 0.0 | 0.45 | 0.52 | 0.83 | 0.82 | 2.06 | 21120 | 2861 | 3 | 0 | 0 | 0 | 0 | logfile |