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Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 7o6B | 12737 | 2023-04-23 | 2021-04-09 | 3.88 | 4.21 | 4.15 | 3.8 | 0.003 | 0.67 | 0.0 | 0.04 | 11.54 | 0.01 | 2.128 | 6.00 | 0.38 | 4.3 | 95.7 | 0.0 | -0.87 | 0.75 | 0.67 | 0.37 | 3.8 | 0.002 | 0.56 | 0.0 | 0.04 | 14.10 | 0.00 | 2.026 | 9.46 | 0.13 | 3.6 | 96.4 | 0.0 | 0.66 | 1.15 | 0.76 | 0.69 | 0.37 | 14200 | 879 | 1 | 0 | 0 | 0 | 7040 | logfile |
✔ | 8EFD | 28080 | 2023-04-20 | 2022-09-08 | 3.8 | 4.67 | 3.83 | 3.9 | 0.002 | 0.49 | 0.0 | 0.04 | 14.10 | 0.00 | 2.048 | 8.46 | 0.13 | 3.8 | 96.2 | 0.0 | 0.81 | 0.88 | 0.79 | 0.38 | 3.9 | 0.002 | 0.61 | 0.0 | 0.04 | 15.94 | 0.00 | 2.165 | 13.04 | 0.26 | 4.5 | 95.5 | 0.0 | 0.71 | 0.55 | 0.88 | 0.80 | 0.54 | 7107 | 886 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 7XK8 | 33247 | 2023-04-20 | 2022-04-19 | 3.3 | 3.49 | 3.12 | 3.4 | 0.003 | 0.48 | 0.0 | 0.04 | 11.62 | 0.00 | 2.248 | 7.78 | 0.00 | 3.1 | 96.9 | 0.0 | -1.25 | 0.55 | 0.65 | 0.38 | 3.5 | 0.006 | 0.74 | 0.0 | 0.05 | 14.76 | 0.00 | 2.041 | 16.39 | 1.34 | 4.6 | 95.4 | 0.0 | 0.19 | 0.68 | 0.59 | 0.73 | 0.65 | 6796 | 923 | 5 | 0 | 1 | 0 | 0 | logfile |
✔ | 7DGD | 30671 | 2023-04-22 | 2020-11-11 | 3.96 | 4.40 | — | 4.2 | 0.015 | 2.08 | 10.0 | 0.12 | 15.16 | 0.01 | 1.930 | 4.79 | 3.87 | 9.2 | 89.9 | 0.9 | -4.26 | 0.61 | 0.53 | 0.38 | 4.2 | 0.004 | 0.85 | 0.0 | 0.04 | 16.24 | 0.00 | 2.143 | 19.09 | 0.15 | 9.4 | 90.5 | 0.1 | -2.00 | 1.90 | 0.69 | 0.68 | 0.77 | 12381 | 1572 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 7CKY | 30394 | 2023-04-23 | 2020-07-20 | 3.2 | 3.28 | — | 3.3 | 0.003 | 0.48 | 0.0 | 0.04 | 14.59 | 0.00 | 2.154 | 17.29 | 1.51 | 4.3 | 95.7 | 0.0 | -2.84 | 0.46 | 0.50 | 0.39 | 3.2 | 0.004 | 0.72 | 0.0 | 0.04 | 16.45 | 0.00 | 2.034 | 23.52 | 0.46 | 6.2 | 93.8 | 0.0 | -1.26 | 1.76 | 0.61 | 0.77 | 1.72 | 8128 | 1038 | 5 | 0 | 2 | 0 | 0 | logfile |
✔ | 5L4K | 4002 | 2023-04-29 | 2016-05-25 | 3.9 | 4.00 | — | 4.2 | 0.007 | 0.85 | 3.0 | 0.05 | 16.12 | 0.01 | 1.808 | 5.03 | 3.82 | 11.8 | 85.0 | 3.2 | -6.15 | 0.34 | 0.64 | 0.39 | 4.0 | 0.004 | 0.79 | 0.0 | 0.04 | 17.43 | 0.01 | 1.906 | 18.52 | 0.60 | 9.2 | 90.4 | 0.5 | -1.87 | 1.81 | 0.37 | 0.70 | 0.35 | 79649 | 5000 | 12 | 0 | 0 | 0 | 39990 | logfile |
✔ | 6QB8 | 4489 | 2023-04-21 | 2018-12-20 | 3.97 | 4.19 | — | 2.3 | 0.005 | 0.96 | 0.0 | 0.06 | 15.67 | 0.01 | 2.238 | 11.60 | 0.76 | 8.2 | 91.8 | 0.0 | -4.47 | 0.89 | 0.77 | 0.40 | 2.1 | 0.004 | 0.79 | 0.0 | 0.05 | 16.49 | 0.00 | 2.037 | 28.20 | 0.27 | 9.0 | 91.0 | 0.0 | -1.64 | 1.54 | 0.89 | 0.80 | 0.52 | 60035 | 7870 | 18 | 0 | 2 | 0 | 0 | logfile |
✔ | 7M3L | 23656 | 2023-04-20 | 2021-03-18 | 3.2 | 4.99 | — | 3.3 | 0.009 | 0.97 | 0.0 | 0.06 | 15.05 | 0.01 | 1.551 | 6.78 | 0.30 | 9.1 | 90.6 | 0.3 | -3.19 | 0.29 | 0.38 | 0.40 | 3.1 | 0.004 | 0.72 | 0.0 | 0.04 | 15.15 | 0.00 | 2.043 | 15.39 | 0.30 | 7.0 | 92.8 | 0.1 | -0.73 | 3.83 | 0.46 | 0.76 | 1.89 | 6113 | 775 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 6YUF | 10930 | 2023-04-25 | 2020-04-27 | 3.94 | 4.30 | 4.21 | 4.1 | 0.018 | 1.71 | 8.0 | 0.08 | 18.03 | 0.01 | 2.033 | 13.39 | 0.24 | 8.9 | 91.1 | 0.0 | -3.37 | 0.77 | 0.75 | 0.41 | 4.2 | 0.003 | 0.77 | 0.0 | 0.04 | 19.06 | 0.00 | 2.048 | 15.09 | 0.34 | 7.5 | 92.5 | 0.0 | -0.98 | 0.64 | 0.78 | 0.77 | 0.22 | 19528 | 2264 | 8 | 64 | 4 | 0 | 0 | logfile |
✔ | 6Y7C | 10713 | 2023-04-29 | 2020-02-28 | 3.8 | 5.42 | 3.84 | 2.8 | 0.015 | 1.44 | 1.0 | 0.06 | 18.67 | 0.02 | 0.193 | 10.34 | 1.00 | 14.3 | 85.4 | 0.3 | -5.44 | 0.89 | 0.71 | 0.41 | 2.6 | 0.013 | 0.93 | 0.0 | 0.04 | 18.90 | 0.01 | 1.977 | 36.16 | 0.35 | 15.8 | 84.1 | 0.1 | -3.77 | 2.58 | 0.92 | 0.79 | 0.35 | 79690 | 5381 | 34 | 1735 | 0 | 0 | 0 | logfile |
✔ | 7M18 | 23615 | 2023-04-20 | 2021-03-12 | 3.38 | 4.09 | — | 4.1 | 0.007 | 1.33 | 0.0 | 0.05 | 19.80 | 0.01 | 1.728 | 23.77 | 0.28 | 10.4 | 89.3 | 0.3 | -2.48 | 0.74 | 0.73 | 0.41 | 4.1 | 0.003 | 0.79 | 0.0 | 0.04 | 19.96 | 0.01 | 2.078 | 17.84 | 0.33 | 8.5 | 91.3 | 0.1 | -1.88 | 0.55 | 0.75 | 0.74 | 0.41 | 54064 | 6904 | 32 | 8 | 16 | 0 | 0 | logfile |
✔ | 7TDi | 25830 | 2023-04-23 | 2021-12-31 | 3.3 | 3.81 | 3.62 | 3.6 | 0.005 | 0.81 | 0.0 | 0.04 | 16.22 | 0.01 | 2.159 | 4.24 | 0.85 | 4.4 | 95.5 | 0.1 | -0.18 | 0.82 | 0.72 | 0.41 | 3.6 | 0.060 | 3.45 | 153.0 | 0.17 | 19.75 | 0.02 | 1.655 | 78.91 | 3.69 | 33.8 | 63.9 | 2.3 | -7.06 | 1.45 | 0.89 | 0.87 | 1.83 | 117132 | 12936 | 8 | 0 | 3616 | 0 | 0 | logfile |
✔ | 7BW8 | 30230 | 2023-04-20 | 2020-04-14 | 3.8 | 4.16 | 3.79 | 4.4 | 0.009 | 1.38 | 0.0 | 0.07 | 17.39 | 0.01 | 1.974 | 49.64 | 0.00 | 22.3 | 77.7 | 0.0 | -5.01 | 0.70 | 0.66 | 0.41 | 4.4 | 0.003 | 0.93 | 0.0 | 0.05 | 18.23 | 0.01 | 2.200 | 21.41 | 0.88 | 10.6 | 89.4 | 0.0 | -3.01 | 2.07 | 0.68 | 0.63 | 0.53 | 6021 | 737 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 7K8V | 22732 | 2023-04-27 | 2020-09-27 | 3.8 | 4.64 | — | 4.0 | 0.003 | 0.62 | 0.0 | 0.07 | 12.76 | 0.00 | 2.005 | 11.42 | 0.15 | 4.8 | 95.1 | 0.2 | -2.90 | 0.81 | 0.74 | 0.42 | 4.1 | 0.003 | 0.66 | 0.0 | 0.04 | 14.56 | 0.00 | 2.141 | 15.09 | 0.26 | 5.3 | 94.6 | 0.1 | -1.26 | 1.16 | 0.82 | 0.79 | 0.49 | 26248 | 3390 | 20 | 0 | 41 | 0 | 0 | logfile |
✔ | 7B6X | 12057 | 2023-04-21 | 2020-12-08 | 3.6 | 2.59 | — | 2.5 | 0.008 | 1.06 | 0.0 | 0.06 | 14.17 | 0.01 | 2.035 | 44.45 | 0.09 | 13.3 | 86.7 | 0.0 | -2.77 | 0.75 | 0.72 | 0.42 | 2.5 | 0.003 | 0.74 | 0.0 | 0.04 | 16.14 | 0.00 | 2.135 | 23.78 | 0.34 | 7.5 | 92.4 | 0.1 | -1.21 | 1.36 | 0.75 | 0.71 | 0.06 | 10470 | 1290 | 8 | 0 | 0 | 0 | 0 | logfile |
✔ | 6oA9 | 0665 | 2023-04-28 | 2019-03-15 | 3.9 | 4.07 | 4.02 | 4.0 | 0.004 | 0.99 | 1.0 | 0.05 | 14.19 | 0.01 | 1.585 | 10.21 | 0.45 | 6.5 | 93.2 | 0.2 | -5.28 | 0.75 | 0.67 | 0.43 | 4.0 | 0.003 | 0.76 | 0.0 | 0.04 | 15.82 | 0.00 | 2.038 | 13.15 | 0.29 | 6.7 | 93.3 | 0.0 | -1.46 | 1.65 | 0.81 | 0.78 | 0.85 | 29006 | 3718 | 17 | 0 | 12 | 0 | 0 | logfile |
✔ | 6Qi8 | 4552 | 2023-04-23 | 2019-01-18 | 3.75 | 3.92 | — | 10.4 | 0.004 | 0.91 | 0.0 | 0.05 | 16.35 | 0.01 | 1.999 | 4.27 | 0.19 | 5.5 | 94.5 | 0.0 | -5.84 | 0.17 | 0.02 | 0.43 | 9.9 | 0.003 | 0.85 | 0.0 | 0.04 | 17.56 | 0.00 | 2.143 | 15.66 | 0.19 | 7.7 | 92.3 | 0.0 | -2.16 | 1.53 | 0.32 | 0.22 | 0.51 | 14789 | 1907 | 12 | 0 | 6 | 0 | 0 | logfile |
✔ | 6Y5H | 10697 | 2023-04-22 | 2020-02-25 | 3.0 | 3.10 | 3.04 | 3.1 | 0.004 | 0.66 | 0.0 | 0.08 | 15.26 | 0.01 | 2.238 | 2.93 | 0.70 | 4.1 | 95.9 | 0.0 | -2.50 | 0.53 | 0.56 | 0.43 | 3.1 | 0.004 | 0.61 | 0.0 | 0.04 | 17.68 | 0.00 | 2.152 | 4.46 | 3.51 | 2.1 | 97.9 | 0.0 | -0.36 | 1.11 | 0.74 | 0.86 | 3.63 | 11994 | 1470 | 18 | 0 | 33 | 0 | 0 | logfile |
✔ | 6WVL | 21922 | 2023-04-27 | 2020-05-06 | 3.2 | 3.69 | 3.05 | 3.8 | 0.013 | 1.98 | 5.0 | 0.10 | 16.20 | 0.02 | 1.944 | 0.63 | 0.41 | 1.8 | 98.2 | 0.0 | -1.96 | 0.44 | 0.48 | 0.43 | 3.6 | 0.004 | 0.67 | 0.0 | 0.04 | 17.33 | 0.00 | 1.796 | 12.42 | 0.41 | 3.4 | 96.6 | 0.0 | -0.06 | 2.50 | 0.49 | 0.74 | 2.41 | 26744 | 1712 | 8 | 2 | 6 | 0 | 13046 | logfile |
✘ | 6TM5 | 10518 | 2023-04-22 | 2019-12-03 | 3.9 | 4.07 | — | 4.1 | 0.010 | 1.11 | 0.0 | 0.05 | 15.92 | 0.01 | 1.619 | 28.83 | 0.76 | 11.9 | 87.8 | 0.3 | -4.46 | 0.36 | 0.48 | 0.44 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 63885 | 8117 | 23 | 0 | 3 | 0 | 0 | logfile |