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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 6N3Q | 0336 | 2023-08-11 | 2018-11-16 | 3.68 | 4.01 | — | 4.0 | 0.006 | 1.03 | 0.0 | 0.05 | 10.91 | 0.01 | 2.308 | 4.48 | 0.67 | 3.2 | 96.8 | 0.0 | -3.32 | 0.63 | 0.78 | 2.20 | 4.0 | 0.005 | 0.80 | 0.0 | 0.04 | 15.42 | 0.00 | 2.175 | 12.10 | 0.86 | 4.4 | 95.6 | 0.0 | 0.89 | 2.71 | 0.69 | 0.81 | 1.66 | 9931 | 1290 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 6N4B | 0339 | 2023-08-10 | 2018-11-18 | 3.0 | 3.84 | — | 3.8 | 0.011 | 1.40 | 4.0 | 0.09 | 9.55 | 0.01 | 1.855 | 20.11 | 0.84 | 2.7 | 97.3 | 0.0 | -2.27 | 0.55 | 0.81 | 3.06 | 3.8 | 0.003 | 0.66 | 0.0 | 0.04 | 15.02 | 0.00 | 2.209 | 6.16 | 2.28 | 4.1 | 95.9 | 0.0 | -0.82 | 0.67 | 0.51 | 0.79 | 2.88 | 8453 | 1121 | 6 | 0 | 3 | 0 | 0 | logfile |
✔ | 6N4Q | 0341 | 2023-08-14 | 2018-11-20 | 3.6 | 4.01 | 3.86 | 4.0 | 0.008 | 1.03 | 0.0 | 0.06 | 10.17 | 0.01 | 2.288 | 3.98 | 0.11 | 7.9 | 92.1 | 0.0 | -3.41 | 0.57 | 0.73 | 1.48 | 4.0 | 0.004 | 0.76 | 0.0 | 0.04 | 14.85 | 0.00 | 2.048 | 10.43 | 0.43 | 6.8 | 93.2 | 0.0 | -0.55 | 0.82 | 0.58 | 0.74 | 1.18 | 16358 | 2052 | 12 | 0 | 0 | 0 | 0 | logfile |
✔ | 6N4R | 0342 | 2023-08-14 | 2018-11-20 | 4.2 | 4.09 | 4.16 | 4.1 | 0.008 | 1.07 | 0.0 | 0.06 | 10.26 | 0.01 | 2.222 | 4.60 | 0.23 | 6.8 | 93.2 | 0.0 | -3.27 | 0.66 | 0.76 | — | 4.1 | 0.003 | 0.72 | 0.0 | 0.04 | 12.63 | 0.00 | 2.154 | 11.44 | 0.12 | 5.9 | 94.1 | 0.0 | -0.61 | 0.84 | 0.64 | 0.77 | — | 15444 | 1942 | 12 | 0 | 0 | 0 | 0 | logfile |
✔ | 6N51 | 0345 | 2023-08-13 | 2018-11-20 | 4.0 | 4.15 | — | 4.0 | 0.006 | 0.84 | 0.0 | 0.05 | 9.49 | 0.01 | 2.274 | 5.73 | 0.00 | 6.8 | 93.2 | 0.0 | -3.65 | 0.71 | 0.81 | — | 4.0 | 0.003 | 0.73 | 0.0 | 0.04 | 13.60 | 0.00 | 2.116 | 13.70 | 0.41 | 4.8 | 95.2 | 0.0 | -0.69 | 1.76 | 0.72 | 0.82 | — | 14087 | 1830 | 6 | 0 | 6 | 0 | 0 | logfile |
✔ | 6N52 | 0346 | 2023-08-12 | 2018-11-20 | 4.0 | 4.42 | — | 3.9 | 0.004 | 0.70 | 0.0 | 0.05 | 8.42 | 0.01 | 2.328 | 4.22 | 0.00 | 4.1 | 95.9 | 0.0 | -4.16 | 0.72 | 0.78 | — | 3.9 | 0.004 | 0.69 | 0.0 | 0.04 | 11.54 | 0.00 | 2.181 | 12.75 | 0.29 | 6.6 | 93.4 | 0.0 | -0.61 | 2.40 | 0.73 | 0.81 | — | 11108 | 1548 | 4 | 0 | 4 | 0 | 0 | logfile |
✔ | 6N57 | 0348 | 2023-08-21 | 2018-11-21 | 3.7 | 3.83 | — | 3.8 | 0.012 | 1.14 | 3.0 | 0.06 | 10.41 | 0.01 | 1.366 | 39.05 | 0.37 | 15.4 | 84.0 | 0.6 | -4.55 | 0.75 | 0.82 | 2.12 | 3.8 | 0.003 | 0.69 | 0.0 | 0.04 | 15.32 | 0.00 | 2.140 | 11.35 | 0.21 | 7.2 | 92.6 | 0.2 | -0.93 | 2.04 | 0.72 | 0.80 | 1.47 | 30233 | 3841 | 11 | 0 | 8 | 0 | 0 | logfile |
✔ | 6N58 | 0349 | 2023-08-21 | 2018-11-21 | 3.78 | 3.90 | — | 3.9 | 0.013 | 1.21 | 0.0 | 0.06 | 10.64 | 0.01 | 1.892 | 38.60 | 0.37 | 14.7 | 84.9 | 0.4 | -4.74 | 0.73 | 0.82 | 2.09 | 3.9 | 0.003 | 0.73 | 0.0 | 0.04 | 15.58 | 0.00 | 2.054 | 12.24 | 0.46 | 7.3 | 92.6 | 0.1 | -1.38 | 3.03 | 0.73 | 0.81 | 1.26 | 30189 | 3833 | 11 | 0 | 8 | 0 | 0 | logfile |
✔ | 6N7H | 0356 | 2023-08-15 | 2018-11-27 | 3.6 | 3.75 | — | 3.7 | 0.010 | 1.32 | 0.0 | 0.07 | 12.34 | 0.01 | 2.008 | 8.78 | 1.35 | 12.3 | 87.1 | 0.6 | -4.46 | 0.64 | 0.76 | 2.32 | 3.7 | 0.003 | 0.78 | 0.0 | 0.05 | 16.01 | 0.00 | 2.038 | 11.22 | 0.45 | 9.9 | 90.1 | 0.0 | -0.45 | 1.45 | 0.66 | 0.78 | 1.70 | 17242 | 2153 | 8 | 0 | 23 | 0 | 0 | logfile |
✔ | 6N7i | 0357 | 2023-08-12 | 2018-11-27 | 3.2 | 3.34 | — | 3.3 | 0.005 | 0.91 | 0.0 | 0.06 | 14.82 | 0.02 | 2.157 | 2.64 | 0.53 | 3.9 | 96.1 | 0.0 | -3.45 | 0.69 | 0.75 | 2.35 | 3.3 | 0.003 | 0.66 | 0.0 | 0.04 | 17.64 | 0.00 | 1.961 | 8.93 | 0.62 | 4.1 | 95.9 | 0.0 | -0.76 | 1.31 | 0.73 | 0.81 | 2.15 | 10833 | 1350 | 12 | 15 | 8 | 1 | 0 | logfile |
✔ | 6N7N | 0359 | 2023-08-12 | 2018-11-27 | 3.5 | 3.55 | — | 3.5 | 0.006 | 0.99 | 0.0 | 0.06 | 14.77 | 0.00 | 1.975 | 4.24 | 0.74 | 5.5 | 94.5 | 0.0 | -3.49 | 0.67 | 0.66 | 1.98 | 3.5 | 0.002 | 0.60 | 0.0 | 0.04 | 16.36 | 0.00 | 1.919 | 10.78 | 0.22 | 4.0 | 96.0 | 0.0 | -0.96 | 1.69 | 0.69 | 0.69 | 1.43 | 12854 | 1608 | 12 | 15 | 10 | 0 | 0 | logfile |
✔ | 6N7P | 0360 | 2023-08-25 | 2018-11-27 | 3.6 | 3.72 | — | 3.6 | 0.011 | 1.17 | 5.0 | 0.07 | 15.19 | 0.01 | 2.186 | 5.79 | 3.35 | 6.9 | 92.4 | 0.6 | -3.75 | 0.71 | 0.79 | 3.02 | 3.6 | 0.002 | 0.62 | 0.0 | 0.04 | 15.56 | 0.00 | 2.032 | 8.53 | 0.21 | 5.8 | 94.1 | 0.1 | 0.70 | 1.49 | 0.68 | 0.76 | 1.78 | 41488 | 4206 | 23 | 580 | 56 | 0 | 0 | logfile |
✘ | 6N7R | 0361 | 2023-08-23 | 2018-11-28 | 3.2 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 35750 | 2908 | 19 | 568 | 91 | 0 | 0 | logfile |
✔ | 6N7S | 0362 | 2023-08-12 | 2018-11-28 | 4.6 | 4.47 | — | 4.4 | 0.008 | 1.20 | 0.0 | 0.07 | 14.87 | 0.01 | 1.812 | 8.33 | 1.04 | 12.5 | 87.5 | 0.0 | -5.07 | 0.69 | 0.54 | — | 4.3 | 0.003 | 0.71 | 0.0 | 0.04 | 14.71 | 0.00 | 1.879 | 15.91 | 0.00 | 5.3 | 94.7 | 0.0 | -2.15 | 1.90 | 0.71 | 0.59 | — | 12783 | 1607 | 11 | 13 | 8 | 0 | 0 | logfile |
✔ | 6N7T | 0363 | 2023-08-12 | 2018-11-28 | 3.9 | 4.01 | — | 3.9 | 0.006 | 0.95 | 0.0 | 0.06 | 15.07 | 0.00 | 1.883 | 3.57 | 0.81 | 5.6 | 94.3 | 0.1 | -3.82 | 0.76 | 0.72 | 1.04 | 3.9 | 0.003 | 0.65 | 0.0 | 0.04 | 17.02 | 0.00 | 1.867 | 10.61 | 0.22 | 4.4 | 95.6 | 0.0 | -1.01 | 1.35 | 0.78 | 0.75 | 0.96 | 12890 | 1610 | 12 | 16 | 10 | 0 | 0 | logfile |
✔ | 6N7V | 0364 | 2023-08-12 | 2018-11-28 | 3.8 | 4.02 | — | 3.8 | 0.005 | 0.89 | 0.0 | 0.05 | 14.42 | 0.00 | 2.119 | 3.58 | 0.15 | 3.8 | 96.2 | 0.0 | -3.41 | 0.76 | 0.74 | 1.21 | 3.8 | 0.003 | 0.68 | 0.0 | 0.04 | 16.51 | 0.00 | 1.834 | 12.45 | 0.30 | 4.2 | 95.8 | 0.0 | -0.67 | 0.95 | 0.78 | 0.77 | 1.06 | 12861 | 1606 | 12 | 16 | 10 | 0 | 0 | logfile |
✔ | 6N7W | 0365 | 2023-08-10 | 2018-11-28 | 4.5 | 4.41 | — | 4.1 | 0.006 | 0.75 | 0.0 | 0.05 | 19.17 | 0.02 | 2.125 | 3.09 | 0.46 | 4.4 | 95.5 | 0.1 | -2.55 | 0.85 | 0.81 | — | 4.1 | 0.004 | 0.62 | 0.0 | 0.04 | 19.57 | 0.00 | 1.972 | 13.04 | 0.00 | 5.0 | 95.0 | 0.0 | 1.12 | 1.92 | 0.87 | 0.84 | — | 7837 | 808 | 5 | 70 | 2 | 0 | 0 | logfile |
✔ | 6N8J | 0369 | 2023-08-18 | 2018-11-29 | 3.5 | 3.75 | — | 3.6 | 0.007 | 0.95 | 0.0 | 0.05 | 15.15 | 0.01 | 1.297 | 3.61 | 0.51 | 7.3 | 92.4 | 0.3 | -4.65 | 0.82 | 0.87 | 3.28 | 3.6 | 0.006 | 0.68 | 0.0 | 0.04 | 16.08 | 0.00 | 1.822 | 9.96 | 0.39 | 8.7 | 91.1 | 0.1 | -1.43 | 1.25 | 0.82 | 0.87 | 2.28 | 132554 | 7675 | 51 | 3326 | 96 | 0 | 0 | logfile |
✔ | 6N8K | 0370 | 2023-08-18 | 2018-11-29 | 3.6 | 3.80 | — | 3.7 | 0.006 | 0.91 | 0.0 | 0.05 | 15.37 | 0.01 | 1.873 | 3.81 | 0.51 | 6.6 | 93.0 | 0.4 | -4.28 | 0.79 | 0.87 | 2.97 | 3.7 | 0.005 | 0.68 | 0.0 | 0.04 | 16.48 | 0.00 | 1.999 | 10.88 | 0.82 | 8.6 | 91.2 | 0.1 | -1.17 | 0.65 | 0.80 | 0.87 | 1.96 | 132821 | 7231 | 49 | 3479 | 212 | 0 | 0 | logfile |
✔ | 6N8L | 0371 | 2023-08-18 | 2018-11-29 | 3.6 | 3.79 | — | 3.7 | 0.007 | 0.93 | 0.0 | 0.05 | 15.30 | 0.01 | 2.200 | 3.54 | 0.64 | 7.3 | 92.2 | 0.5 | -4.50 | 0.80 | 0.87 | 3.56 | 3.7 | 0.005 | 0.67 | 1.0 | 0.04 | 16.35 | 0.01 | 2.055 | 10.32 | 0.69 | 8.4 | 91.4 | 0.2 | -1.49 | 2.29 | 0.80 | 0.87 | 2.37 | 129926 | 6884 | 48 | 3479 | 210 | 0 | 0 | logfile |