The table shows a selection of parameters. Activate more columns using
the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 7EZ0 | 31385 | 2023-11-14 | 2021-06-01 | 3.14 | 3.26 | — | 3.2 | 0.003 | 0.56 | 0.0 | 0.03 | 14.43 | 0.00 | 1.804 | 2.25 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.74 | 0.79 | — | 3.2 | 0.006 | 0.68 | 0.0 | 0.04 | 15.56 | 0.00 | 1.860 | 8.26 | 0.00 | 0.0 | 0.0 | 0.0 | — | 1.91 | 0.76 | 0.85 | — | 8306 | 0 | 1 | 387 | 27 | 0 | 0 | logfile |
✔ | 7N77 | 24222 | 2023-11-14 | 2021-06-09 | 3.2 | 4.05 | 3.31 | 3.7 | 0.006 | 1.31 | 0.0 | 0.06 | 12.82 | 0.01 | 1.692 | 9.63 | 0.14 | 3.5 | 96.5 | 0.0 | -1.56 | 0.64 | 0.74 | 1.92 | 3.7 | 0.003 | 0.89 | 0.0 | 0.04 | 13.91 | 0.00 | 2.016 | 6.14 | 0.14 | 2.1 | 97.9 | 0.0 | 2.12 | 1.62 | 0.68 | 0.82 | 0.92 | 7470 | 1036 | 1 | 0 | 4 | 2 | 0 | logfile |
✔ | 6WBY | 21601 | 2023-11-14 | 2020-03-27 | 3.4 | 3.73 | 3.45 | 3.6 | 0.010 | 1.04 | 0.0 | 0.06 | 12.68 | 0.01 | 2.042 | 3.28 | 0.32 | 6.3 | 93.6 | 0.1 | -5.12 | 0.78 | 0.87 | 3.21 | 3.6 | 0.003 | 0.64 | 0.0 | 0.05 | 13.49 | 0.00 | 2.197 | 5.85 | 0.00 | 5.0 | 95.0 | 0.0 | -0.51 | 0.36 | 0.77 | 0.87 | 2.48 | 9156 | 1250 | 1 | 0 | 2 | 0 | 0 | logfile |
✔ | 7W7W | 32350 | 2023-11-14 | 2021-12-06 | 3.2 | 2.98 | 3.22 | 3.2 | 0.003 | 1.16 | 0.0 | 0.04 | 13.44 | 0.00 | 2.051 | 8.21 | 0.00 | 2.9 | 97.1 | 0.0 | 0.82 | 0.59 | 0.74 | 2.05 | 3.2 | 0.002 | 0.84 | 0.0 | 0.04 | 15.74 | 0.00 | 1.537 | 8.97 | 0.23 | 3.9 | 96.1 | 0.0 | 0.72 | 0.38 | 0.58 | 0.75 | 1.99 | 7870 | 1018 | 1 | 0 | 2 | 0 | 0 | logfile |
✔ | 7FiJ | 31599 | 2023-11-13 | 2021-07-31 | 3.8 | 2.32 | — | 1.8 | 0.001 | 0.41 | 0.0 | 0.04 | 8.02 | 0.00 | 2.344 | 3.95 | 0.00 | 4.1 | 95.9 | 0.0 | 1.10 | 0.58 | 0.50 | 3.05 | 1.6 | 0.003 | 0.71 | 0.0 | 0.04 | 10.87 | 0.00 | 2.234 | 8.95 | 1.25 | 10.6 | 89.4 | 0.0 | -0.78 | 0.63 | 0.60 | 0.54 | 2.95 | 3061 | 561 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 6SKZ | 10232 | 2023-11-18 | 2019-08-16 | 3.4 | 3.55 | — | 3.5 | 0.011 | 0.82 | 1.0 | 0.05 | 14.81 | 0.01 | 1.872 | 8.66 | 5.39 | 7.4 | 92.5 | 0.1 | -3.09 | 0.72 | 0.81 | 1.81 | 3.5 | 0.003 | 0.60 | 0.0 | 0.04 | 16.15 | 0.00 | 2.146 | 7.38 | 0.35 | 4.4 | 95.6 | 0.0 | 1.33 | 0.75 | 0.73 | 0.84 | 1.72 | 20930 | 2638 | 1 | 0 | 2 | 0 | 0 | logfile |
✔ | 6KWX | 0780 | 2023-11-16 | 2019-09-09 | 3.75 | 4.07 | — | 4.0 | 0.011 | 1.55 | 1.0 | 0.17 | 13.00 | 0.01 | 1.627 | 13.84 | 1.69 | 9.0 | 90.6 | 0.3 | -4.69 | 0.68 | 0.72 | 1.40 | 4.0 | 0.004 | 0.88 | 0.0 | 0.05 | 17.29 | 0.00 | 2.112 | 16.75 | 0.31 | 7.3 | 92.7 | 0.1 | -0.73 | 1.13 | 0.68 | 0.80 | 1.07 | 14227 | 1751 | 1 | 0 | 2 | 0 | 0 | logfile |
✔ | 5LY6 | 4118 | 2023-11-13 | 2016-09-24 | 4.5 | 4.72 | — | 4.3 | 0.006 | 1.24 | 0.0 | 0.03 | 24.28 | 0.02 | 1.526 | 94.62 | 36.32 | 20.9 | 74.2 | 4.9 | -5.32 | 0.34 | 0.59 | — | 4.4 | 0.003 | 0.77 | 0.0 | 0.04 | 13.91 | 0.00 | 2.223 | 14.60 | 0.00 | 8.3 | 91.5 | 0.2 | -2.31 | 3.59 | 0.40 | 0.76 | — | 3725 | 471 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 6LLE | 0912 | 2023-11-14 | 2019-12-23 | 2.9 | 3.06 | 2.85 | 3.0 | 0.005 | 0.63 | 0.0 | 0.04 | 12.59 | 0.00 | 2.050 | 6.54 | 0.00 | 2.7 | 97.3 | 0.0 | -1.87 | 0.67 | 0.82 | 3.28 | 3.0 | 0.002 | 0.56 | 0.0 | 0.04 | 16.67 | 0.00 | 2.092 | 7.67 | 1.95 | 2.1 | 97.9 | 0.0 | 0.63 | 0.45 | 0.68 | 0.84 | 2.79 | 7916 | 1020 | 1 | 0 | 4 | 0 | 0 | logfile |
✔ | 7DV5 | 30870 | 2023-11-14 | 2021-01-12 | 3.7 | 3.37 | — | 3.7 | 0.011 | 1.46 | 6.0 | 0.08 | 13.90 | 0.01 | 1.936 | 9.61 | 2.23 | 11.7 | 88.2 | 0.1 | -6.60 | 0.63 | 0.79 | 2.16 | 3.7 | 0.002 | 0.66 | 0.0 | 0.04 | 16.09 | 0.00 | 2.213 | 9.45 | 0.30 | 6.7 | 93.3 | 0.0 | -3.47 | 1.63 | 0.63 | 0.78 | 0.87 | 9319 | 1189 | 1 | 0 | 2 | 0 | 0 | logfile |
✘ | 7RAV | 24387 | 2023-11-13 | 2021-07-02 | 3.3 | 2.69 | 3.21 | 2.4 | 0.004 | 0.93 | 0.0 | 0.05 | 15.84 | 0.01 | 2.224 | 16.68 | 1.17 | 16.7 | 82.9 | 0.4 | -3.36 | 0.72 | 0.71 | 2.18 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 6215 | 773 | 1 | 0 | 1 | 0 | 0 | logfile |
✔ | 7PZR | 13736 | 2023-11-16 | 2021-10-13 | 3.0 | 3.57 | — | 3.3 | 0.004 | 0.71 | 0.0 | 0.04 | 12.71 | 0.01 | 2.062 | 11.63 | 0.00 | 1.5 | 98.5 | 0.0 | 3.84 | 0.77 | 0.69 | 1.43 | 3.3 | 0.005 | 0.89 | 0.0 | 0.05 | 16.07 | 0.01 | 2.079 | 21.17 | 1.77 | 2.0 | 98.0 | 0.0 | 1.77 | 2.50 | 0.80 | 0.77 | 0.93 | 7404 | 935 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 8ET9 | 28589 | 2023-11-14 | 2022-10-16 | 3.61 | 3.97 | 3.84 | 3.9 | 0.005 | 0.61 | 0.0 | 0.04 | 10.84 | 0.01 | 2.058 | 8.46 | 0.52 | 1.8 | 98.2 | 0.0 | 1.38 | 0.46 | 0.67 | 2.05 | 3.9 | 0.003 | 0.58 | 0.0 | 0.03 | 14.29 | 0.00 | 1.959 | 10.28 | 0.26 | 3.7 | 96.3 | 0.0 | 0.86 | 4.56 | 0.47 | 0.68 | 2.12 | 7685 | 517 | 1 | 0 | 1 | 0 | 3796 | logfile |
✘ | 7Y7W | 33672 | 2023-11-13 | 2022-06-22 | 2.4 | 2.70 | 2.46 | 2.7 | 0.006 | 0.78 | 0.0 | 0.08 | 17.46 | 0.00 | 1.907 | 5.88 | 1.11 | 3.0 | 97.0 | 0.0 | 0.06 | 0.68 | 0.85 | 4.04 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 4310 | 529 | 1 | 0 | 7 | 48 | 0 | logfile |
✔ | 7WLi | 32584 | 2023-11-14 | 2022-01-13 | 3.3 | 3.59 | — | 3.6 | 0.012 | 1.01 | 1.0 | 0.06 | 14.88 | 0.01 | 1.888 | 15.00 | 0.20 | 7.3 | 92.5 | 0.2 | -0.17 | 0.59 | 0.78 | 2.16 | 3.6 | 0.004 | 0.70 | 0.0 | 0.04 | 16.29 | 0.00 | 2.141 | 14.63 | 0.30 | 6.1 | 93.9 | 0.0 | 0.64 | 0.51 | 0.59 | 0.78 | 1.73 | 9493 | 1135 | 1 | 0 | 21 | 0 | 0 | logfile |
✔ | 7WNX | 32634 | 2023-11-15 | 2022-01-20 | 3.36 | 3.85 | — | 3.7 | 0.033 | 0.94 | 0.0 | 0.18 | 14.67 | 0.00 | 2.209 | 8.77 | 0.50 | 8.2 | 91.5 | 0.3 | -2.32 | 0.64 | 0.83 | 1.69 | 3.7 | 0.005 | 0.77 | 0.0 | 0.09 | 15.47 | 0.01 | 1.773 | 19.73 | 0.33 | 8.2 | 91.8 | 0.0 | -1.84 | 0.34 | 0.66 | 0.85 | 1.55 | 5643 | 734 | 1 | 0 | 1 | 0 | 0 | logfile |
✔ | 5M5H | 4155 | 2023-11-13 | 2016-10-21 | 4.5 | 2.29 | — | 2.2 | 0.007 | 1.50 | 0.0 | 0.08 | 12.37 | 0.01 | 2.186 | 39.89 | 0.00 | 8.7 | 88.9 | 2.4 | -5.94 | 0.14 | 0.14 | — | 2.1 | 0.004 | 0.89 | 0.0 | 0.05 | 12.67 | 0.01 | 2.275 | 23.84 | 0.00 | 8.7 | 91.3 | 0.0 | -1.45 | 2.20 | 0.15 | 0.14 | — | 1086 | 132 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 7WiT | 32535 | 2023-11-14 | 2022-01-04 | 3.21 | 3.87 | 3.47 | 3.8 | 0.005 | 0.57 | 0.0 | 0.04 | 10.80 | 0.00 | 2.271 | 4.78 | 3.11 | 3.3 | 96.7 | 0.0 | -0.91 | 0.61 | 0.77 | 2.46 | 3.8 | 0.002 | 0.51 | 0.0 | 0.04 | 13.61 | 0.00 | 2.200 | 4.97 | 0.68 | 1.9 | 98.1 | 0.0 | 1.83 | 0.65 | 0.61 | 0.79 | 1.39 | 8109 | 1133 | 1 | 0 | 2 | 0 | 0 | logfile |
✔ | 7XD4 | 33135 | 2023-11-14 | 2022-03-26 | 3.89 | 4.13 | — | 3.8 | 0.003 | 0.59 | 0.0 | 0.03 | 15.73 | 0.00 | 1.880 | 1.73 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.85 | 0.73 | — | 3.8 | 0.007 | 0.78 | 0.0 | 0.04 | 17.52 | 0.01 | 1.755 | 18.36 | 0.00 | 0.0 | 0.0 | 0.0 | — | 1.84 | 0.87 | 0.78 | — | 9062 | 0 | 1 | 423 | 28 | 0 | 0 | logfile |
✔ | 7ADJ | 11727 | 2023-11-14 | 2020-09-15 | 2.8 | 3.02 | 2.79 | 3.0 | 0.014 | 1.99 | 4.0 | 0.11 | 14.68 | 0.01 | 2.562 | 0.51 | 0.18 | 6.9 | 93.1 | 0.0 | -2.18 | 0.34 | 0.70 | 3.50 | 3.0 | 0.003 | 0.64 | 0.0 | 0.04 | 17.18 | 0.00 | 2.131 | 7.52 | 2.57 | 7.9 | 92.1 | 0.0 | -1.24 | 1.53 | 0.40 | 0.77 | 2.99 | 9710 | 613 | 1 | 0 | 0 | 0 | 4790 | logfile |