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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 7B52 | 12017 | 2023-04-22 | 2020-12-03 | 3.8 | 4.98 | — | 3.9 | 0.004 | 0.84 | 0.0 | 0.04 | 14.20 | 0.00 | 2.035 | 24.47 | 0.07 | 16.4 | 83.4 | 0.2 | -2.23 | 0.83 | 0.84 | 0.97 | 3.9 | 0.003 | 0.72 | 0.0 | 0.04 | 15.17 | 0.00 | 2.105 | 18.54 | 0.21 | 13.6 | 86.3 | 0.1 | -1.29 | 0.92 | 0.83 | 0.83 | 0.73 | 13186 | 1638 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 7E7S | 31003 | 2023-04-20 | 2021-02-27 | 3.3 | 3.32 | 3.27 | 3.4 | 0.003 | 0.50 | 0.0 | 0.04 | 14.41 | 0.00 | 2.166 | 8.26 | 0.00 | 2.6 | 97.4 | 0.0 | -0.13 | 0.68 | 0.82 | 1.44 | 3.3 | 0.002 | 0.53 | 0.0 | 0.04 | 15.91 | 0.00 | 2.219 | 8.70 | 0.00 | 3.3 | 96.7 | 0.0 | 1.42 | 1.29 | 0.66 | 0.82 | 0.60 | 7884 | 1020 | 1 | 0 | 2 | 0 | 0 | logfile |
✔ | 7FAS | 31505 | 2023-04-21 | 2021-07-07 | 3.6 | 2.95 | — | 3.7 | 0.002 | 0.52 | 0.0 | 0.04 | 15.63 | 0.00 | 2.193 | 9.10 | 0.09 | 4.1 | 95.9 | 0.0 | 0.85 | 0.72 | 0.73 | 0.88 | 3.7 | 0.003 | 0.54 | 0.0 | 0.04 | 17.25 | 0.00 | 2.192 | 9.70 | 0.18 | 4.1 | 95.9 | 0.0 | 1.07 | 0.43 | 0.73 | 0.75 | 0.97 | 10173 | 1229 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 5UAR | 8461 | 2023-04-21 | 2016-12-19 | 3.73 | 4.36 | — | 4.4 | 0.008 | 1.18 | 0.0 | 0.06 | 13.30 | 0.00 | 2.393 | 0.26 | 1.06 | 7.4 | 92.5 | 0.1 | -3.58 | 0.58 | 0.77 | 1.39 | 4.4 | 0.003 | 0.72 | 0.0 | 0.04 | 16.08 | 0.00 | 2.142 | 10.48 | 0.39 | 4.6 | 95.4 | 0.0 | -0.29 | 1.53 | 0.61 | 0.80 | 0.97 | 9489 | 1184 | 1 | 0 | 2 | 0 | 0 | logfile |
✔ | 8DWi | 27755 | 2023-04-19 | 2022-08-01 | 3.4 | 4.06 | 3.58 | 4.1 | 0.003 | 0.63 | 0.0 | 0.04 | 13.02 | 0.01 | 2.258 | 7.44 | 0.00 | 5.0 | 95.0 | 0.0 | 0.29 | 0.28 | 0.33 | -0.40 | 4.0 | 0.003 | 0.74 | 0.0 | 0.04 | 16.17 | 0.01 | 2.113 | 11.24 | 0.64 | 5.0 | 95.0 | 0.0 | -0.32 | 1.76 | 0.49 | 0.73 | 1.52 | 3192 | 424 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 8DRQ | 27681 | 2023-04-20 | 2022-07-21 | 4.16 | 4.28 | 4.60 | 4.1 | 0.004 | 0.89 | 0.0 | 0.05 | 15.60 | 0.01 | 2.283 | 15.85 | 0.00 | 5.9 | 94.1 | 0.0 | -3.30 | 0.39 | 0.56 | — | 4.1 | 0.003 | 0.81 | 0.0 | 0.05 | 13.41 | 0.00 | 2.156 | 19.67 | 0.00 | 8.1 | 91.9 | 0.0 | -3.21 | 1.78 | 0.41 | 0.56 | — | 3321 | 407 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 7URi | 26713 | 2023-04-19 | 2022-04-22 | 2.6 | 2.67 | 2.95 | 2.6 | 0.009 | 1.37 | 0.0 | 0.12 | 25.77 | 0.01 | 2.201 | 7.31 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.05 | 0.34 | — | 2.6 | 0.008 | 1.44 | 0.0 | 0.07 | 23.84 | 0.01 | 2.072 | 23.68 | 0.00 | 0.0 | 0.0 | 0.0 | — | 2.06 | 0.08 | 0.38 | — | 1905 | 0 | 1 | 90 | 0 | 0 | 0 | logfile |
✔ | 8F7J | 28905 | 2023-04-20 | 2022-11-18 | 4.32 | 4.45 | 4.63 | 8.9 | 0.005 | 0.92 | 0.0 | 0.05 | 15.44 | 0.01 | 2.282 | 15.12 | 0.26 | 5.7 | 94.3 | 0.0 | -3.18 | 0.38 | 0.32 | — | 4.3 | 0.004 | 0.80 | 0.0 | 0.04 | 13.92 | 0.01 | 2.122 | 24.96 | 0.00 | 9.4 | 90.6 | 0.0 | -3.21 | 2.94 | 0.44 | 0.45 | — | 3321 | 407 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 7UVK | 26812 | 2023-04-21 | 2022-05-02 | 3.28 | 3.22 | 3.00 | 3.3 | 0.005 | 0.74 | 0.0 | 0.05 | 13.60 | 0.00 | 2.168 | 11.01 | 0.00 | 9.0 | 91.0 | 0.0 | -3.16 | 0.57 | 0.78 | 2.35 | 3.2 | 0.003 | 0.68 | 0.0 | 0.04 | 16.31 | 0.00 | 2.075 | 11.69 | 0.61 | 9.4 | 90.6 | 0.0 | -2.27 | 1.11 | 0.71 | 0.87 | 2.85 | 10350 | 1295 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 7URM | 26714 | 2023-04-19 | 2022-04-22 | 3.0 | 3.11 | 3.56 | 2.9 | 0.009 | 1.41 | 0.0 | 0.11 | 23.67 | 0.01 | 2.440 | 0.70 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.14 | 0.53 | — | 3.0 | 0.007 | 1.16 | 0.0 | 0.05 | 22.87 | 0.01 | 1.983 | 29.94 | 0.00 | 0.0 | 0.0 | 0.0 | — | 1.70 | 0.15 | 0.54 | — | 1905 | 0 | 1 | 90 | 0 | 0 | 0 | logfile |
✔ | 7oJJ | 12953 | 2023-04-23 | 2021-05-16 | 3.5 | 4.03 | 3.58 | 3.5 | 0.006 | 0.66 | 2.0 | 0.06 | 13.63 | 0.00 | 2.009 | 9.47 | 0.12 | 11.4 | 88.6 | 0.0 | -3.69 | 0.92 | 0.87 | 2.01 | 3.5 | 0.003 | 0.60 | 0.0 | 0.04 | 14.79 | 0.00 | 2.000 | 8.25 | 0.06 | 7.7 | 92.3 | 0.0 | -0.47 | 0.98 | 0.92 | 0.88 | 1.67 | 14330 | 1785 | 1 | 0 | 2 | 0 | 0 | logfile |
✔ | 8GoE | 34176 | 2023-04-20 | 2022-08-24 | 3.0 | 3.01 | 3.02 | 3.1 | 0.006 | 0.76 | 1.0 | 0.05 | 12.65 | 0.01 | 2.273 | 6.40 | 0.57 | 2.0 | 98.0 | 0.0 | -6.19 | 0.46 | 0.82 | 4.16 | 3.1 | 0.003 | 0.63 | 1.0 | 0.04 | 14.15 | 0.00 | 2.175 | 7.73 | 1.70 | 2.5 | 97.5 | 0.0 | 0.94 | 0.42 | 0.45 | 0.83 | 3.08 | 3323 | 407 | 1 | 0 | 1 | 0 | 0 | logfile |
✔ | 7Mi6 | 23841 | 2023-04-29 | 2021-04-16 | 3.9 | 4.23 | 3.91 | 4.0 | 0.012 | 1.49 | 3.0 | 0.08 | 13.51 | 0.01 | 2.027 | 6.46 | 1.32 | 5.3 | 94.3 | 0.4 | -2.30 | 0.84 | 0.82 | 1.35 | 4.0 | 0.003 | 0.75 | 0.0 | 0.04 | 16.29 | 0.00 | 1.991 | 14.50 | 0.14 | 3.1 | 96.8 | 0.0 | 0.58 | 1.19 | 0.85 | 0.83 | 1.41 | 19653 | 2419 | 1 | 0 | 4 | 0 | 0 | logfile |
✔ | 6YJ5 | 10816 | 2023-04-19 | 2020-04-02 | 3.5 | 2.92 | 3.56 | 3.3 | 0.007 | 0.87 | 0.0 | 0.05 | 13.19 | 0.01 | 2.183 | 4.22 | 0.00 | 12.5 | 87.5 | 0.0 | -5.13 | 0.42 | 0.62 | 3.01 | 3.3 | 0.007 | 0.81 | 0.0 | 0.05 | 15.31 | 0.01 | 2.257 | 11.88 | 0.61 | 12.2 | 87.8 | 0.0 | -2.14 | 0.81 | 0.52 | 0.74 | 3.59 | 2061 | 306 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 7NVH | 12604 | 2023-04-20 | 2021-03-15 | 3.0 | 3.23 | 3.00 | 3.2 | 0.006 | 0.73 | 0.0 | 0.05 | 14.27 | 0.01 | 2.145 | 7.79 | 0.69 | 5.6 | 94.4 | 0.0 | -0.42 | 0.64 | 0.86 | 2.63 | 3.2 | 0.002 | 0.57 | 0.0 | 0.04 | 15.32 | 0.00 | 2.246 | 7.08 | 0.87 | 4.3 | 95.7 | 0.0 | 0.81 | 0.33 | 0.64 | 0.87 | 2.42 | 5528 | 717 | 1 | 0 | 1 | 0 | 0 | logfile |
✔ | 7XQ2 | 33389 | 2023-04-20 | 2022-05-06 | 3.3 | 3.45 | 3.15 | 3.5 | 0.007 | 0.79 | 1.0 | 0.05 | 15.54 | 0.01 | 2.244 | 6.48 | 0.85 | 3.7 | 96.3 | 0.0 | -6.96 | 0.56 | 0.83 | 4.29 | 3.5 | 0.003 | 0.58 | 0.0 | 0.04 | 16.35 | 0.00 | 2.217 | 8.10 | 0.00 | 3.0 | 97.0 | 0.0 | 0.34 | 2.06 | 0.44 | 0.78 | 3.44 | 3377 | 409 | 1 | 0 | 2 | 0 | 0 | logfile |
✔ | 6ZFP | 11185 | 2023-04-29 | 2020-06-17 | 3.24 | 3.95 | 3.34 | 3.7 | 0.006 | 0.70 | 0.0 | 0.05 | 14.34 | 0.00 | 2.198 | 9.71 | 0.12 | 8.4 | 91.5 | 0.1 | -1.19 | 0.83 | 0.83 | 1.85 | 3.7 | 0.002 | 0.61 | 0.0 | 0.04 | 15.64 | 0.00 | 2.202 | 7.49 | 0.22 | 5.8 | 94.1 | 0.1 | 0.31 | 0.76 | 0.80 | 0.77 | 1.22 | 29385 | 3676 | 1 | 0 | 28 | 0 | 0 | logfile |
✔ | 8EiG | 28155 | 2023-04-21 | 2022-09-15 | 3.6 | 2.88 | 3.69 | 3.4 | 0.006 | 1.05 | 0.0 | 0.04 | 12.55 | 0.00 | 1.883 | 2.03 | 1.91 | 2.5 | 97.4 | 0.1 | -0.77 | 0.61 | 0.79 | 2.59 | 3.4 | 0.002 | 0.54 | 0.0 | 0.04 | 15.46 | 0.00 | 2.025 | 5.08 | 0.20 | 3.5 | 96.4 | 0.1 | 0.93 | 0.67 | 0.59 | 0.80 | 1.56 | 9249 | 1141 | 1 | 0 | 6 | 0 | 0 | logfile |
✔ | 6WYK | 21967 | 2023-04-19 | 2020-05-13 | 4.0 | 4.14 | — | 4.2 | 0.007 | 0.77 | 0.0 | 0.05 | 11.98 | 0.00 | 2.223 | 5.97 | 0.00 | 3.4 | 96.6 | 0.0 | -2.28 | 0.62 | 0.77 | — | 4.2 | 0.004 | 0.86 | 0.0 | 0.05 | 16.17 | 0.00 | 2.173 | 13.51 | 0.31 | 2.9 | 97.1 | 0.0 | 1.58 | 0.85 | 0.62 | 0.78 | — | 3083 | 415 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 7FJP | 31626 | 2023-04-20 | 2021-08-04 | 3.0 | 3.19 | — | 3.2 | 0.006 | 1.14 | 1.0 | 0.07 | 10.95 | 0.01 | 1.270 | 7.70 | 0.80 | 7.0 | 92.2 | 0.7 | -4.60 | 0.71 | 0.81 | 3.22 | 3.1 | 0.003 | 0.77 | 0.0 | 0.04 | 14.50 | 0.00 | 2.086 | 7.15 | 3.62 | 5.9 | 93.9 | 0.2 | -0.38 | 0.65 | 0.69 | 0.83 | 2.56 | 7239 | 983 | 1 | 0 | 4 | 0 | 0 | logfile |