The table shows a selection of parameters. Activate more columns using
the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 5WQ9 | 6677 | 2023-12-08 | 2016-11-23 | 4.22 | 4.37 | — | 4.2 | 0.009 | 1.22 | 15.0 | 0.07 | 11.97 | 0.01 | 1.501 | 38.54 | 2.89 | 4.4 | 95.4 | 0.2 | -2.32 | 0.78 | 0.68 | — | 4.2 | 0.003 | 0.74 | 0.0 | 0.05 | 12.99 | 0.00 | 2.095 | 13.53 | 0.08 | 3.4 | 96.5 | 0.1 | 0.06 | 1.94 | 0.85 | 0.83 | — | 56340 | 7395 | 15 | 0 | 0 | 0 | 0 | logfile |
✔ | 7ZE3 | 14682 | 2023-12-09 | 2022-03-30 | 2.7 | 2.61 | 2.65 | 2.7 | 0.014 | 4.25 | 0.0 | 0.04 | 16.34 | 0.01 | 2.231 | 3.86 | 0.00 | 1.3 | 98.7 | 0.0 | 0.75 | 0.69 | 0.85 | 4.12 | 2.7 | 0.003 | 2.12 | 0.0 | 0.04 | 17.70 | 0.00 | 1.891 | 5.81 | 0.74 | 1.4 | 98.6 | 0.0 | 2.80 | 0.81 | 0.69 | 0.85 | 2.80 | 10285 | 967 | 54 | 0 | 42 | 37 | 0 | logfile |
✔ | 6N24 | 9322 | 2023-12-09 | 2018-11-12 | 3.0 | 3.88 | — | 3.7 | 0.007 | 0.78 | 0.0 | 0.05 | 9.04 | 0.01 | 2.332 | 3.60 | 0.29 | 3.6 | 96.4 | 0.0 | -6.07 | 0.73 | 0.84 | 3.71 | 3.8 | 0.004 | 0.65 | 0.0 | 0.04 | 14.25 | 0.00 | 2.098 | 7.33 | 1.80 | 2.1 | 97.9 | 0.0 | 0.21 | 2.31 | 0.63 | 0.72 | 3.01 | 12643 | 1530 | 5 | 0 | 0 | 0 | 0 | logfile |
✔ | 7QEY | 13944 | 2023-12-08 | 2021-12-03 | 2.0 | 2.46 | — | 2.2 | 0.005 | 0.85 | 0.0 | 0.03 | 10.53 | 0.00 | 2.199 | 3.57 | 2.35 | 1.7 | 98.3 | 0.0 | 1.74 | 0.77 | 0.90 | 5.27 | 2.1 | 0.003 | 0.67 | 0.0 | 0.04 | 13.25 | 0.00 | 2.163 | 4.76 | 1.23 | 2.4 | 97.6 | 0.0 | 3.06 | 0.57 | 0.78 | 0.93 | 4.32 | 9467 | 1092 | 18 | 0 | 30 | 281 | 0 | logfile |
✔ | 6TMV | 10528 | 2023-12-08 | 2019-12-05 | 3.45 | 3.57 | — | 3.5 | 0.008 | 1.29 | 0.0 | 0.07 | 13.72 | 0.00 | 2.584 | 1.72 | 1.04 | 3.9 | 96.1 | 0.0 | -3.14 | 0.81 | 0.83 | 2.35 | 3.5 | 0.005 | 0.62 | 0.0 | 0.04 | 15.74 | 0.00 | 2.142 | 8.11 | 0.24 | 2.8 | 97.2 | 0.0 | 0.81 | 1.39 | 0.83 | 0.83 | 1.98 | 58106 | 7604 | 14 | 0 | 0 | 0 | 0 | logfile |
✔ | 6NMC | 0446 | 2023-12-10 | 2019-01-10 | 4.24 | 4.55 | — | 4.2 | 0.014 | 1.16 | 6.0 | 0.07 | 16.77 | 0.01 | 2.015 | 20.07 | 2.45 | 10.2 | 89.4 | 0.4 | -4.23 | 0.86 | 0.76 | — | 4.2 | 0.003 | 0.70 | 0.0 | 0.04 | 14.89 | 0.00 | 1.917 | 16.52 | 0.07 | 6.8 | 93.2 | 0.0 | -0.71 | 1.84 | 0.89 | 0.84 | — | 12808 | 1480 | 8 | 25 | 2 | 6 | 0 | logfile |
✔ | 6SUE | 10312 | 2023-12-07 | 2019-09-13 | 3.4 | 3.48 | 3.43 | 3.3 | 0.021 | 1.72 | 5.0 | 0.10 | 10.89 | 0.01 | 2.214 | 1.22 | 0.01 | 2.1 | 97.7 | 0.3 | 0.31 | 0.86 | 0.81 | 2.68 | 3.3 | 0.003 | 0.64 | 0.0 | 0.04 | 14.76 | 0.00 | 2.069 | 11.07 | 0.24 | 3.6 | 96.4 | 0.1 | 0.81 | 1.39 | 0.87 | 0.84 | 2.24 | 108270 | 13628 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 7P92 | 13258 | 2023-12-09 | 2021-07-23 | 2.7 | 2.17 | 2.57 | 2.3 | 0.003 | 0.56 | 1.0 | 0.04 | 14.12 | 0.00 | 1.985 | 4.69 | 0.18 | 3.7 | 96.3 | 0.0 | 0.23 | 0.52 | 0.78 | 3.78 | 2.4 | 0.002 | 0.52 | 0.0 | 0.04 | 17.07 | 0.00 | 2.196 | 5.77 | 1.20 | 2.7 | 97.3 | 0.0 | 0.75 | 1.88 | 0.51 | 0.78 | 3.47 | 10436 | 1322 | 9 | 0 | 12 | 157 | 0 | logfile |
✔ | 7SYF | 25524 | 2023-12-09 | 2021-11-24 | 4.2 | 3.03 | 3.92 | 2.2 | 0.013 | 1.86 | 8.0 | 0.10 | 14.32 | 0.01 | 2.460 | 1.62 | 1.31 | 3.9 | 96.1 | 0.0 | -1.56 | 0.67 | 0.61 | — | 2.2 | 0.003 | 0.78 | 0.0 | 0.04 | 13.94 | 0.00 | 1.993 | 16.84 | 0.08 | 3.1 | 96.9 | 0.0 | 0.80 | 1.17 | 0.68 | 0.63 | — | 11108 | 1391 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 7KYB | 23074 | 2023-12-09 | 2020-12-07 | 3.2 | 3.39 | — | 3.4 | 0.012 | 1.23 | 0.0 | 0.05 | 17.43 | 0.00 | 1.917 | 12.45 | 8.04 | 7.9 | 91.9 | 0.2 | -2.75 | 0.69 | 0.86 | 3.54 | 3.4 | 0.003 | 0.59 | 0.0 | 0.04 | 16.60 | 0.00 | 2.068 | 8.78 | 0.35 | 4.9 | 95.1 | 0.0 | -0.12 | 0.94 | 0.69 | 0.88 | 3.01 | 10814 | 1322 | 7 | 0 | 14 | 0 | 0 | logfile |
✔ | 8QZC | 18774 | 2023-12-09 | 2023-10-26 | 3.29 | 3.49 | 3.36 | 3.5 | 0.004 | 0.81 | 0.0 | 0.05 | 13.36 | 0.01 | 2.246 | 3.27 | 0.00 | 4.4 | 95.6 | 0.0 | -1.37 | 0.72 | 0.78 | 2.47 | 3.5 | 0.003 | 0.62 | 0.0 | 0.04 | 15.21 | 0.00 | 2.113 | 7.55 | 0.24 | 4.6 | 95.4 | 0.0 | 0.38 | 0.76 | 0.74 | 0.82 | 1.87 | 11468 | 1402 | 4 | 0 | 4 | 0 | 0 | logfile |
✔ | 6YE4 | 10789 | 2023-12-08 | 2020-03-24 | 3.2 | 3.33 | 3.07 | 3.3 | 0.026 | 1.69 | 0.0 | 0.10 | 15.50 | 0.01 | 2.373 | 3.02 | 0.00 | 0.9 | 99.1 | 0.0 | -3.36 | 0.73 | 0.88 | 2.50 | 3.3 | 0.002 | 0.49 | 0.0 | 0.03 | 16.48 | 0.00 | 2.377 | 4.96 | 0.00 | 2.3 | 97.7 | 0.0 | 3.88 | 0.94 | 0.65 | 0.85 | 1.25 | 9140 | 1180 | 10 | 0 | 5 | 0 | 0 | logfile |
✔ | 8AA4 | 15293 | 2023-12-10 | 2022-06-29 | 3.1 | 3.54 | 2.92 | 3.2 | 0.001 | 0.41 | 0.0 | 0.04 | 7.46 | 0.00 | 2.240 | 3.52 | 0.00 | 2.7 | 97.2 | 0.1 | 0.39 | 0.73 | 0.88 | 4.17 | 3.2 | 0.004 | 0.59 | 0.0 | 0.04 | 10.31 | 0.00 | 2.136 | 4.08 | 0.00 | 4.6 | 95.3 | 0.1 | -0.44 | 0.94 | 0.73 | 0.90 | 4.26 | 13616 | 1742 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 7ZDi | 14650 | 2023-12-09 | 2022-03-29 | 2.9 | 3.06 | 2.82 | 3.1 | 0.005 | 0.93 | 0.0 | 0.04 | 13.22 | 0.01 | 2.378 | 3.63 | 0.00 | 0.9 | 99.1 | 0.0 | 1.10 | 0.64 | 0.84 | 5.30 | 3.1 | 0.003 | 0.76 | 0.0 | 0.04 | 14.62 | 0.00 | 2.238 | 4.42 | 0.25 | 0.9 | 99.1 | 0.0 | 3.61 | 0.28 | 0.69 | 0.87 | 4.13 | 10284 | 976 | 38 | 0 | 42 | 0 | 0 | logfile |
✔ | 6C0W | 7326 | 2023-12-10 | 2018-01-02 | 4.0 | 4.10 | 3.87 | 4.0 | 0.006 | 0.81 | 0.0 | 0.05 | 27.86 | 0.01 | 2.107 | 4.25 | 0.00 | 4.9 | 95.1 | 0.0 | -4.19 | 0.80 | 0.83 | — | 4.0 | 0.004 | 0.67 | 0.0 | 0.04 | 28.13 | 0.00 | 2.110 | 12.14 | 0.64 | 4.1 | 95.9 | 0.0 | 0.61 | 1.28 | 0.80 | 0.83 | — | 13122 | 925 | 11 | 278 | 0 | 0 | 0 | logfile |
✔ | 7WED | 32447 | 2023-12-07 | 2021-12-23 | 3.5 | 3.62 | — | 3.7 | 0.003 | 0.70 | 0.0 | 0.05 | 13.75 | 0.01 | 2.285 | 7.13 | 0.00 | 8.2 | 91.8 | 0.0 | -1.64 | 0.57 | 0.77 | 2.25 | 3.6 | 0.004 | 0.69 | 0.0 | 0.04 | 16.64 | 0.00 | 2.248 | 7.29 | 0.54 | 9.2 | 90.8 | 0.0 | -1.26 | 1.14 | 0.57 | 0.79 | 1.83 | 3358 | 431 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 6N28 | 9326 | 2023-12-10 | 2018-11-12 | 2.9 | 3.06 | — | 3.1 | 0.006 | 0.78 | 0.0 | 0.05 | 9.54 | 0.01 | 2.215 | 3.56 | 0.00 | 2.4 | 97.6 | 0.0 | -3.44 | 0.75 | 0.87 | 3.66 | 3.1 | 0.004 | 0.54 | 0.0 | 0.04 | 13.76 | 0.00 | 2.201 | 6.43 | 1.65 | 2.4 | 97.6 | 0.0 | 1.40 | 1.97 | 0.77 | 0.90 | 2.98 | 13885 | 1690 | 10 | 0 | 5 | 0 | 0 | logfile |
✘ | 6RX4 | 10049 | 2023-12-08 | 2019-06-07 | 3.3 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 7347 | 884 | 8 | 0 | 31 | 7 | 0 | logfile |
✔ | 6LLE | 0912 | 2023-12-08 | 2019-12-23 | 2.9 | 3.06 | 2.85 | 3.0 | 0.005 | 0.63 | 0.0 | 0.04 | 13.04 | 0.00 | 2.050 | 6.54 | 0.00 | 2.7 | 97.3 | 0.0 | -1.87 | 0.67 | 0.82 | 3.28 | 3.0 | 0.003 | 0.57 | 0.0 | 0.04 | 16.97 | 0.00 | 2.069 | 7.73 | 2.18 | 2.2 | 97.8 | 0.0 | 0.50 | 0.45 | 0.69 | 0.84 | 2.89 | 7916 | 1020 | 1 | 0 | 4 | 0 | 0 | logfile |
✔ | 6TNT | 10536 | 2023-12-09 | 2019-12-10 | 3.78 | 4.15 | — | 3.8 | 0.005 | 0.66 | 0.0 | 0.04 | 14.23 | 0.00 | 1.949 | 14.34 | 9.38 | 7.1 | 92.7 | 0.2 | -2.25 | 0.90 | 0.85 | 1.37 | 3.8 | 0.003 | 0.71 | 0.0 | 0.04 | 15.47 | 0.00 | 2.020 | 13.73 | 0.33 | 6.6 | 93.4 | 0.1 | 0.70 | 1.31 | 0.90 | 0.85 | 1.12 | 63827 | 8109 | 21 | 0 | 3 | 0 | 0 | logfile |