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Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 5JUY | 8178 | 2023-04-28 | 2016-05-10 | 4.1 | 4.28 | — | 4.1 | 0.009 | 1.23 | 0.0 | 0.05 | 10.72 | 0.00 | 1.447 | 16.11 | 0.71 | 6.6 | 93.0 | 0.4 | -3.18 | 0.76 | 0.55 | — | 4.1 | 0.003 | 0.66 | 0.0 | 0.04 | 12.04 | 0.00 | 2.092 | 12.45 | 0.00 | 5.3 | 94.6 | 0.1 | -0.61 | 1.62 | 0.84 | 0.69 | — | 76058 | 9461 | 32 | 0 | 14 | 0 | 0 | logfile |
✔ | 5K0Z | 8191 | 2023-04-21 | 2016-05-17 | 2.8 | 4.15 | — | 2.8 | 0.011 | 1.04 | 0.0 | 0.06 | 10.64 | 0.01 | 2.056 | 18.30 | 0.00 | 2.9 | 97.1 | 0.0 | -4.11 | 0.73 | 0.58 | 1.27 | 3.1 | 0.005 | 1.15 | 0.0 | 0.06 | 17.03 | 0.01 | 2.099 | 33.56 | 4.91 | 4.5 | 95.5 | 0.0 | -0.35 | 1.52 | 0.87 | 0.84 | 1.07 | 9749 | 1268 | 8 | 0 | 0 | 41 | 0 | logfile |
✔ | 5K10 | 8192 | 2023-04-22 | 2016-05-17 | 3.8 | 4.74 | — | 3.8 | 0.009 | 0.93 | 0.0 | 0.06 | 12.22 | 0.02 | 2.138 | 33.42 | 0.30 | 6.9 | 92.6 | 0.5 | -4.07 | 0.80 | 0.57 | 0.98 | 3.8 | 0.004 | 0.84 | 0.0 | 0.04 | 16.04 | 0.00 | 2.197 | 24.77 | 0.15 | 3.7 | 96.0 | 0.3 | -0.14 | 1.89 | 0.92 | 0.86 | 1.02 | 6338 | 794 | 4 | 0 | 2 | 0 | 0 | logfile |
✔ | 5K11 | 8193 | 2023-04-22 | 2016-05-17 | 3.8 | 4.50 | — | 3.8 | 0.012 | 1.23 | 0.0 | 0.06 | 12.12 | 0.01 | 2.061 | 29.53 | 0.30 | 6.1 | 93.4 | 0.5 | -4.89 | 0.80 | 0.59 | 1.53 | 3.8 | 0.004 | 0.88 | 0.0 | 0.05 | 15.49 | 0.00 | 2.139 | 21.59 | 0.15 | 4.5 | 95.5 | 0.0 | -0.28 | 1.64 | 0.90 | 0.84 | 1.22 | 6338 | 794 | 4 | 0 | 2 | 0 | 0 | logfile |
✔ | 5K12 | 8194 | 2023-04-23 | 2016-05-17 | 1.8 | 2.40 | — | 2.8 | 0.008 | 0.97 | 0.0 | 0.06 | 10.27 | 0.01 | 2.051 | 19.79 | 0.82 | 3.8 | 96.2 | 0.0 | -2.53 | 0.66 | 0.74 | 5.80 | 2.8 | 0.003 | 0.56 | 0.0 | 0.04 | 15.71 | 0.01 | 2.213 | 9.95 | 0.27 | 1.9 | 98.1 | 0.0 | 2.18 | 0.90 | 0.71 | 0.89 | 3.52 | 14856 | 1764 | 12 | 0 | 0 | 1086 | 0 | logfile |
✔ | 5K7L | 8215 | 2023-04-27 | 2016-05-26 | 3.78 | 6.37 | — | 3.6 | 0.008 | 1.36 | 20.0 | 0.07 | 13.27 | 0.00 | 2.315 | 9.11 | 0.35 | 7.3 | 92.6 | 0.1 | -0.20 | 0.75 | 0.79 | 1.04 | 3.6 | 0.003 | 0.70 | 0.0 | 0.04 | 13.79 | 0.00 | 2.151 | 11.88 | 0.22 | 4.0 | 96.0 | 0.0 | 1.44 | 2.35 | 0.75 | 0.80 | 0.78 | 24696 | 3372 | 12 | 0 | 8 | 0 | 0 | logfile |
✔ | 5KEL | 8240 | 2023-04-25 | 2016-06-09 | 4.3 | 4.47 | — | 4.3 | 0.015 | 1.82 | 0.0 | 0.10 | 11.37 | 0.01 | 1.763 | 12.56 | 0.45 | 3.4 | 95.3 | 1.3 | 1.64 | 0.78 | 0.75 | — | 4.3 | 0.004 | 0.86 | 0.0 | 0.05 | 13.58 | 0.00 | 2.105 | 19.99 | 0.00 | 8.5 | 91.1 | 0.4 | -0.95 | 1.07 | 0.80 | 0.81 | — | 19278 | 2409 | 33 | 0 | 45 | 0 | 0 | logfile |
✔ | 5KEN | 8242 | 2023-04-24 | 2016-06-09 | 4.3 | 6.36 | 5.67 | 5.5 | 0.014 | 1.82 | 4.0 | 0.19 | 11.60 | 0.01 | 1.282 | 7.71 | 0.22 | 2.9 | 95.6 | 1.4 | 1.45 | 0.82 | 0.71 | — | 5.5 | 0.006 | 0.91 | 0.0 | 0.05 | 13.33 | 0.01 | 1.950 | 43.76 | 0.00 | 10.1 | 89.3 | 0.7 | -2.23 | 2.80 | 0.85 | 0.81 | — | 16913 | 2147 | 24 | 0 | 24 | 0 | 0 | logfile |
✔ | 5KGF | 8246 | 2023-04-22 | 2016-06-13 | 4.54 | 4.64 | — | 4.5 | 0.009 | 1.37 | 2.0 | 0.07 | 27.90 | 0.01 | 1.243 | 27.10 | 0.12 | 6.5 | 93.1 | 0.4 | -4.86 | 0.79 | 0.76 | — | 4.5 | 0.005 | 0.74 | 0.0 | 0.04 | 26.39 | 0.01 | 2.121 | 20.23 | 0.00 | 7.0 | 92.8 | 0.2 | -0.78 | 1.06 | 0.83 | 0.84 | — | 13782 | 986 | 14 | 290 | 0 | 0 | 0 | logfile |
✔ | 5KUF | 8289 | 2023-04-26 | 2016-07-13 | 3.8 | 3.80 | — | 3.7 | 0.009 | 1.02 | 0.0 | 0.05 | 8.87 | 0.01 | 2.021 | 29.22 | 0.08 | 15.5 | 84.4 | 0.1 | -5.82 | 0.61 | 0.71 | 1.68 | 3.7 | 0.003 | 0.69 | 0.0 | 0.04 | 13.57 | 0.00 | 2.155 | 13.20 | 0.35 | 5.9 | 94.1 | 0.0 | -1.38 | 1.57 | 0.61 | 0.71 | 1.29 | 23728 | 3000 | 8 | 0 | 4 | 0 | 0 | logfile |
✔ | 5L4K | 4002 | 2023-04-29 | 2016-05-25 | 3.9 | 4.00 | — | 4.2 | 0.007 | 0.85 | 3.0 | 0.05 | 16.12 | 0.01 | 1.808 | 5.03 | 3.82 | 11.8 | 85.0 | 3.2 | -6.15 | 0.34 | 0.64 | 0.39 | 4.0 | 0.004 | 0.79 | 0.0 | 0.04 | 17.43 | 0.01 | 1.906 | 18.52 | 0.60 | 9.2 | 90.4 | 0.5 | -1.87 | 1.81 | 0.37 | 0.70 | 0.35 | 79649 | 5000 | 12 | 0 | 0 | 0 | 39990 | logfile |
✔ | 5LD2 | 4038 | 2023-04-26 | 2016-06-23 | 3.83 | 4.18 | — | 3.9 | 0.010 | 1.05 | 2.0 | 0.05 | 13.02 | 0.01 | 1.975 | 17.88 | 0.25 | 5.7 | 94.0 | 0.2 | -3.86 | 0.88 | 0.87 | 2.00 | 3.9 | 0.004 | 0.69 | 0.0 | 0.04 | 15.83 | 0.00 | 1.912 | 12.94 | 0.12 | 4.6 | 95.3 | 0.1 | 0.46 | 0.76 | 0.87 | 0.86 | 1.72 | 23981 | 2857 | 5 | 51 | 22 | 0 | 0 | logfile |
✔ | 5Lii | 4053 | 2023-04-19 | 2016-07-14 | 3.8 | 2.99 | — | 3.9 | 0.015 | 2.41 | 6.0 | 0.14 | 12.69 | 0.01 | 1.855 | 42.83 | 1.41 | 16.9 | 81.9 | 1.2 | -6.10 | 0.55 | 0.70 | 3.46 | 3.8 | 0.003 | 0.88 | 0.0 | 0.04 | 15.96 | 0.01 | 2.201 | 13.15 | 1.41 | 14.6 | 84.7 | 0.7 | -4.22 | 0.87 | 0.56 | 0.67 | 1.49 | 3098 | 433 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 5LiJ | 4054 | 2023-04-19 | 2016-07-14 | 4.2 | 3.63 | — | 4.2 | 0.009 | 2.92 | 4.0 | 0.17 | 15.82 | 0.01 | 2.249 | 25.64 | 0.00 | 10.7 | 89.3 | 0.0 | -6.36 | 0.85 | 0.76 | — | 3.8 | 0.005 | 1.18 | 0.0 | 0.04 | 10.31 | 0.00 | 2.148 | 15.12 | 0.00 | 32.0 | 68.0 | 0.0 | -5.66 | 1.48 | 0.86 | 0.78 | — | 761 | 152 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 5LJ3 | 4055 | 2023-04-22 | 2016-07-17 | 3.8 | 3.92 | — | 3.8 | 0.007 | 1.46 | 40.0 | 0.09 | 17.30 | 0.01 | 1.631 | 5.99 | 8.54 | 8.1 | 90.7 | 1.2 | -1.69 | 0.70 | 0.81 | 1.37 | 3.8 | 0.003 | 0.72 | 0.0 | 0.04 | 17.08 | 0.00 | 2.001 | 14.49 | 0.45 | 4.9 | 94.9 | 0.2 | 0.41 | 0.85 | 0.69 | 0.78 | 1.39 | 63161 | 7305 | 45 | 458 | 142 | 0 | 0 | logfile |
✔ | 5LJo | 4061 | 2023-04-27 | 2016-07-19 | 4.9 | 7.28 | — | 5.9 | 0.014 | 1.69 | 1.0 | 0.08 | 11.01 | 0.01 | 2.147 | 5.45 | 0.15 | 9.4 | 86.8 | 3.8 | -2.52 | 0.69 | 0.58 | — | 5.9 | 0.003 | 0.70 | 0.0 | 0.04 | 12.76 | 0.00 | 1.923 | 18.84 | 0.00 | 12.3 | 87.3 | 0.4 | -2.48 | 1.32 | 0.80 | 0.80 | — | 24947 | 1624 | 5 | 0 | 0 | 0 | 12255 | logfile |
✔ | 5LKi | 4068 | 2023-04-20 | 2016-07-22 | 3.46 | 3.72 | — | 3.5 | 0.013 | 1.24 | 5.0 | 0.06 | 10.71 | 0.01 | 0.579 | 39.51 | 0.18 | 7.7 | 91.7 | 0.6 | -4.39 | 0.65 | 0.79 | 2.37 | 3.5 | 0.004 | 0.83 | 0.0 | 0.04 | 15.10 | 0.00 | 2.088 | 15.46 | 0.70 | 7.1 | 92.5 | 0.4 | 0.24 | 0.81 | 0.63 | 0.80 | 1.65 | 55415 | 7135 | 5 | 0 | 0 | 0 | 0 | logfile |
✔ | 5LL6 | 4071 | 2023-04-20 | 2016-07-26 | 3.9 | 4.01 | — | 3.9 | 0.012 | 1.50 | 6.0 | 0.11 | 19.04 | 0.01 | 0.924 | 4.96 | 2.53 | 10.6 | 85.7 | 3.7 | -3.86 | 0.69 | 0.82 | 1.20 | 3.9 | 0.009 | 1.04 | 0.0 | 0.05 | 19.21 | 0.01 | 1.715 | 25.88 | 1.94 | 13.6 | 85.6 | 0.9 | -3.02 | 0.89 | 0.70 | 0.81 | 0.98 | 55262 | 3429 | 20 | 1325 | 5 | 0 | 0 | logfile |
✔ | 5LMN | 4073 | 2023-04-20 | 2016-08-01 | 3.55 | 3.68 | 3.61 | 3.6 | 0.007 | 1.42 | 35.0 | 0.12 | 20.67 | 0.01 | 0.925 | 19.85 | 21.59 | 10.4 | 86.7 | 2.8 | -2.30 | 0.79 | 0.88 | 1.35 | 3.6 | 0.004 | 0.72 | 0.0 | 0.04 | 17.13 | 0.00 | 1.859 | 19.78 | 0.87 | 7.4 | 92.2 | 0.3 | -1.09 | 1.56 | 0.77 | 0.84 | 1.29 | 54149 | 2623 | 27 | 1534 | 129 | 0 | 0 | logfile |
✔ | 5LMo | 4074 | 2023-04-20 | 2016-08-01 | 4.3 | 4.71 | 4.30 | 4.3 | 0.009 | 1.47 | 50.0 | 0.12 | 20.86 | 0.01 | 0.865 | 18.49 | 20.40 | 10.6 | 85.8 | 3.6 | -2.76 | 0.80 | 0.69 | — | 4.3 | 0.005 | 0.76 | 0.0 | 0.04 | 16.78 | 0.01 | 0.968 | 35.61 | 0.00 | 9.3 | 90.2 | 0.5 | -1.75 | 2.17 | 0.87 | 0.84 | — | 54110 | 2622 | 29 | 1533 | 110 | 0 | 0 | logfile |