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Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 5FNA | 3241 | 2023-11-13 | 2015-11-11 | 4.8 | 4.43 | — | 4.2 | 0.013 | 1.51 | 0.0 | 0.08 | 12.32 | 0.01 | 2.219 | 36.54 | 0.00 | 6.0 | 94.0 | 0.0 | -1.83 | 0.48 | 0.71 | — | 4.2 | 0.004 | 0.85 | 0.0 | 0.04 | 14.28 | 0.01 | 2.153 | 22.99 | 0.00 | 8.4 | 90.4 | 1.2 | -0.31 | 2.61 | 0.49 | 0.75 | — | 5328 | 680 | 8 | 0 | 0 | 0 | 0 | logfile |
✔ | 5FTJ | 3295 | 2023-11-21 | 2016-01-14 | 2.3 | 2.04 | — | 2.0 | 0.010 | 1.30 | 0.0 | 0.07 | 14.89 | 0.01 | 1.862 | 40.83 | 0.81 | 5.7 | 93.3 | 1.0 | -3.32 | 0.42 | 0.65 | 2.67 | 2.0 | 0.005 | 0.91 | 0.0 | 0.05 | 18.72 | 0.01 | 2.036 | 17.11 | 2.68 | 7.2 | 92.7 | 0.1 | -1.40 | 1.22 | 0.47 | 0.68 | 1.91 | 34602 | 4338 | 18 | 0 | 18 | 120 | 0 | logfile |
✔ | 5FTK | 3296 | 2023-11-21 | 2016-01-14 | 2.4 | 2.04 | — | 2.0 | 0.011 | 1.39 | 0.0 | 0.07 | 12.31 | 0.01 | 2.216 | 25.01 | 0.65 | 6.1 | 93.5 | 0.4 | -4.37 | 0.44 | 0.66 | 3.22 | 2.0 | 0.004 | 0.86 | 0.0 | 0.05 | 17.78 | 0.01 | 2.112 | 16.73 | 4.31 | 8.6 | 91.3 | 0.1 | -1.98 | 1.25 | 0.50 | 0.70 | 1.75 | 34374 | 4338 | 18 | 0 | 12 | 96 | 0 | logfile |
✔ | 5FTL | 3297 | 2023-11-21 | 2016-01-14 | 3.3 | 2.96 | — | 2.9 | 0.010 | 1.12 | 0.0 | 0.06 | 10.70 | 0.01 | 2.214 | 17.11 | 0.00 | 6.1 | 93.2 | 0.7 | -4.22 | 0.69 | 0.81 | 2.28 | 2.9 | 0.004 | 0.77 | 0.0 | 0.05 | 16.09 | 0.01 | 2.100 | 11.61 | 0.27 | 5.9 | 93.9 | 0.2 | -0.86 | 2.19 | 0.69 | 0.81 | 1.33 | 34278 | 4338 | 12 | 0 | 12 | 0 | 0 | logfile |
✔ | 5FTM | 3298 | 2023-11-21 | 2016-01-14 | 3.2 | 2.96 | — | 2.9 | 0.014 | 1.34 | 1.0 | 0.07 | 11.93 | 0.02 | 2.163 | 23.59 | 0.51 | 7.6 | 91.7 | 0.7 | -4.68 | 0.71 | 0.82 | 2.33 | 2.9 | 0.004 | 0.76 | 0.0 | 0.05 | 16.13 | 0.00 | 2.107 | 12.64 | 0.43 | 7.3 | 92.4 | 0.3 | -1.63 | 1.29 | 0.71 | 0.82 | 1.52 | 34554 | 4368 | 12 | 0 | 18 | 0 | 0 | logfile |
✔ | 5FTN | 3299 | 2023-11-21 | 2016-01-14 | 3.3 | 2.95 | — | 2.9 | 0.012 | 1.27 | 0.0 | 0.07 | 10.98 | 0.01 | 2.234 | 22.42 | 0.32 | 7.4 | 91.7 | 1.0 | -4.38 | 0.62 | 0.80 | 3.11 | 2.9 | 0.004 | 0.79 | 0.0 | 0.05 | 15.63 | 0.01 | 1.866 | 12.22 | 0.29 | 8.9 | 90.6 | 0.5 | -0.96 | 1.29 | 0.63 | 0.80 | 2.19 | 34956 | 4422 | 12 | 0 | 24 | 0 | 0 | logfile |
✔ | 5FUU | 3308 | 2023-11-17 | 2016-01-29 | 4.19 | 4.30 | — | 4.2 | 0.014 | 1.86 | 3.0 | 0.12 | 11.14 | 0.02 | 1.862 | 17.37 | 1.20 | 6.2 | 92.2 | 1.7 | -2.38 | 0.69 | 0.72 | — | 4.2 | 0.004 | 0.85 | 0.0 | 0.05 | 13.02 | 0.00 | 2.160 | 14.08 | 0.05 | 6.9 | 92.6 | 0.6 | -1.30 | 0.96 | 0.77 | 0.83 | — | 20735 | 2281 | 70 | 0 | 213 | 0 | 0 | logfile |
✔ | 5FWK | 3337 | 2023-11-19 | 2016-02-17 | 3.9 | 3.97 | — | 3.9 | 0.016 | 1.31 | 0.0 | 0.07 | 9.60 | 0.01 | 1.173 | 2.17 | 0.00 | 4.0 | 95.5 | 0.5 | -0.44 | 0.77 | 0.77 | 1.55 | 3.9 | 0.003 | 0.62 | 0.0 | 0.04 | 14.82 | 0.00 | 1.821 | 11.16 | 0.28 | 5.7 | 94.3 | 0.0 | -0.14 | 1.24 | 0.77 | 0.77 | 1.68 | 26221 | 1612 | 6 | 0 | 4 | 0 | 13109 | logfile |
✔ | 5G04 | 3385 | 2023-11-15 | 2016-03-16 | 3.9 | 3.86 | — | 3.8 | 0.019 | 1.88 | 181.0 | 0.13 | 19.17 | 0.01 | 1.629 | 17.65 | 13.63 | 6.3 | 91.5 | 2.2 | -2.36 | 0.78 | 0.65 | 0.91 | 3.8 | 0.008 | 0.89 | 0.0 | 0.04 | 18.07 | 0.00 | 2.003 | 19.55 | 0.83 | 5.9 | 93.5 | 0.6 | 0.04 | 1.74 | 0.84 | 0.77 | 0.67 | 65481 | 8322 | 22 | 0 | 3 | 0 | 0 | logfile |
✔ | 5G05 | 3388 | 2023-11-15 | 2016-03-16 | 3.4 | 3.84 | — | 3.5 | 0.016 | 1.81 | 55.0 | 0.10 | 18.98 | 0.01 | 0.612 | 56.69 | 17.76 | 4.5 | 93.6 | 1.8 | -0.14 | 0.85 | 0.76 | 1.42 | 3.5 | 0.003 | 0.84 | 0.0 | 0.04 | 17.34 | 0.00 | 2.093 | 16.82 | 0.41 | 4.9 | 94.6 | 0.5 | 0.75 | 3.20 | 0.89 | 0.84 | 1.25 | 63181 | 8027 | 21 | 0 | 3 | 0 | 0 | logfile |
✔ | 5G06 | 3366 | 2023-11-19 | 2016-03-17 | 4.2 | 4.89 | — | 4.7 | 0.036 | 3.53 | 246.0 | 0.21 | 17.03 | 0.03 | 1.189 | 3.05 | 3.01 | 5.9 | 92.3 | 1.9 | -2.39 | 0.66 | 0.46 | — | 4.7 | 0.003 | 0.75 | 0.0 | 0.04 | 14.36 | 0.00 | 2.082 | 17.81 | 0.00 | 4.2 | 95.6 | 0.1 | -0.48 | 1.80 | 0.88 | 0.79 | — | 26794 | 3420 | 11 | 0 | 0 | 0 | 0 | logfile |
✔ | 5G2X | 3331 | 2023-11-17 | 2016-04-16 | 3.8 | 3.49 | — | 3.4 | 0.001 | 0.32 | 0.0 | 0.02 | 11.56 | 0.00 | 2.219 | 4.36 | 0.45 | 19.7 | 74.4 | 5.9 | -5.72 | 0.51 | 0.30 | -0.09 | 3.3 | 0.006 | 0.93 | 0.0 | 0.04 | 19.63 | 0.01 | 1.935 | 41.01 | 0.91 | 20.6 | 78.2 | 1.3 | -4.93 | 2.35 | 0.80 | 0.66 | 0.49 | 19072 | 487 | 3 | 704 | 0 | 0 | 0 | logfile |
✔ | 5G2Y | 3332 | 2023-11-15 | 2016-04-16 | 4.5 | 4.38 | — | 3.8 | 0.001 | 0.22 | 0.0 | 0.01 | 11.90 | 0.00 | 2.269 | 2.32 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.58 | 0.28 | — | 3.7 | 0.007 | 1.02 | 0.0 | 0.05 | 23.48 | 0.01 | 1.939 | 74.53 | 0.00 | 0.0 | 0.0 | 0.0 | — | 3.24 | 0.89 | 0.78 | — | 13494 | 0 | 1 | 630 | 0 | 0 | 0 | logfile |
✔ | 5GAD | 8000 | 2023-11-21 | 2015-11-24 | 3.7 | 4.17 | — | 3.9 | 0.009 | 1.11 | 1.0 | 0.05 | 15.93 | 0.01 | 1.737 | 9.19 | 10.34 | 3.5 | 96.5 | 0.1 | -3.19 | 0.77 | 0.79 | 1.52 | 3.9 | 0.006 | 0.64 | 0.0 | 0.03 | 15.15 | 0.00 | 1.073 | 17.72 | 0.67 | 3.9 | 96.0 | 0.1 | -0.19 | 1.60 | 0.81 | 0.88 | 1.28 | 98006 | 4087 | 49 | 3049 | 507 | 0 | 0 | logfile |
✔ | 5GAE | 8001 | 2023-11-21 | 2015-11-25 | 3.33 | 3.45 | — | 3.3 | 0.007 | 0.94 | 0.0 | 0.04 | 14.78 | 0.00 | 1.884 | 5.65 | 5.36 | 3.0 | 96.9 | 0.1 | -2.76 | 0.79 | 0.88 | 2.24 | 3.3 | 0.007 | 0.69 | 0.0 | 0.04 | 15.18 | 0.01 | 1.783 | 12.84 | 0.86 | 4.2 | 95.7 | 0.1 | -0.11 | 1.54 | 0.79 | 0.89 | 2.25 | 95192 | 3886 | 41 | 3007 | 349 | 0 | 0 | logfile |
✔ | 5GAF | 8002 | 2023-11-21 | 2015-11-25 | 4.3 | 4.42 | — | 4.3 | 0.007 | 1.09 | 1.0 | 0.05 | 15.95 | 0.01 | 1.266 | 8.87 | 11.04 | 3.5 | 96.4 | 0.1 | -3.28 | 0.63 | 0.64 | — | 4.3 | 0.005 | 0.73 | 0.0 | 0.04 | 15.26 | 0.01 | 0.984 | 21.89 | 0.03 | 5.5 | 94.3 | 0.1 | -1.30 | 1.41 | 0.71 | 0.85 | — | 96182 | 3889 | 47 | 3049 | 452 | 0 | 0 | logfile |
✔ | 5GAG | 8003 | 2023-11-21 | 2015-11-26 | 3.8 | 3.95 | — | 3.8 | 0.007 | 1.04 | 1.0 | 0.05 | 15.71 | 0.00 | 1.789 | 8.16 | 9.03 | 3.0 | 96.9 | 0.1 | -3.35 | 0.79 | 0.90 | 1.98 | 3.8 | 0.005 | 0.65 | 0.0 | 0.04 | 15.28 | 0.01 | 1.012 | 15.42 | 0.69 | 3.7 | 96.2 | 0.1 | -0.65 | 0.68 | 0.78 | 0.88 | 2.04 | 94030 | 3598 | 46 | 3049 | 473 | 0 | 0 | logfile |
✔ | 5GAH | 8004 | 2023-11-21 | 2015-11-26 | 3.8 | 3.97 | — | 3.9 | 0.008 | 1.10 | 0.0 | 0.05 | 15.97 | 0.01 | 1.737 | 8.30 | 11.31 | 3.3 | 96.7 | 0.1 | -3.33 | 0.73 | 0.85 | 1.12 | 3.9 | 0.006 | 0.70 | 0.0 | 0.04 | 15.36 | 0.01 | 1.174 | 15.08 | 1.21 | 4.7 | 95.2 | 0.1 | -0.76 | 1.16 | 0.74 | 0.87 | 1.51 | 94027 | 3595 | 46 | 3049 | 473 | 0 | 0 | logfile |
✔ | 5GAK | 3227 | 2023-11-18 | 2015-12-09 | 3.88 | 4.13 | — | 19.0 | 0.006 | 0.94 | 0.0 | 0.06 | 20.85 | 0.01 | 0.816 | 23.89 | 0.26 | 9.2 | 90.2 | 0.7 | -3.81 | 0.21 | 0.02 | 0.28 | 4.0 | 0.003 | 0.83 | 0.0 | 0.04 | 19.62 | 0.01 | 1.977 | 24.30 | 0.53 | 9.4 | 90.1 | 0.4 | -2.72 | 1.99 | 0.33 | 0.25 | 0.07 | 128975 | 6434 | 50 | 3597 | 234 | 0 | 0 | logfile |
✔ | 5GAM | 8011 | 2023-11-17 | 2015-12-15 | 3.7 | 4.03 | — | 3.9 | 0.008 | 1.49 | 11.0 | 0.10 | 19.79 | 0.01 | 1.976 | 11.79 | 6.60 | 10.0 | 88.2 | 1.8 | -2.90 | 0.72 | 0.57 | 1.24 | 3.9 | 0.003 | 0.87 | 0.0 | 0.05 | 18.84 | 0.00 | 2.082 | 17.28 | 0.67 | 6.8 | 93.0 | 0.2 | -1.15 | 1.71 | 0.80 | 0.79 | 1.05 | 19123 | 2002 | 13 | 166 | 19 | 0 | 0 | logfile |