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Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 6oFF | 20044 | 2023-09-30 | 2019-03-29 | 3.2 | 3.32 | — | 3.3 | 0.009 | 0.83 | 0.0 | 0.04 | 10.88 | 0.01 | 2.147 | 4.73 | 0.00 | 3.9 | 96.1 | 0.0 | -5.21 | 0.59 | 0.85 | 4.52 | 3.3 | 0.002 | 0.53 | 0.0 | 0.03 | 15.58 | 0.00 | 2.230 | 6.89 | 0.25 | 3.8 | 96.2 | 0.0 | 4.04 | 1.22 | 0.62 | 0.88 | 3.84 | 11016 | 1404 | 18 | 0 | 0 | 0 | 0 | logfile |
✔ | 7T6D | 25713 | 2023-09-28 | 2021-12-13 | 3.9 | 4.12 | 3.81 | 4.1 | 0.006 | 0.84 | 2.0 | 0.05 | 13.08 | 0.02 | 2.172 | 12.57 | 1.42 | 2.9 | 97.0 | 0.1 | 1.14 | 0.54 | 0.61 | 0.72 | 4.1 | 0.003 | 0.58 | 0.0 | 0.03 | 14.51 | 0.00 | 2.240 | 7.32 | 0.71 | 2.4 | 97.6 | 0.0 | 2.81 | 0.66 | 0.61 | 0.70 | 0.72 | 7566 | 1181 | 6 | 0 | 2 | 0 | 0 | logfile |
✔ | 7N3P | 24143 | 2023-09-29 | 2021-06-01 | 3.65 | 3.97 | — | 3.9 | 0.003 | 0.58 | 0.0 | 0.04 | 18.98 | 0.00 | 2.224 | 8.05 | 0.00 | 2.2 | 97.8 | 0.0 | 1.68 | 0.77 | 0.79 | 2.64 | 3.9 | 0.002 | 0.55 | 0.0 | 0.03 | 19.60 | 0.00 | 2.172 | 12.01 | 0.54 | 2.0 | 98.0 | 0.0 | 1.72 | 0.44 | 0.78 | 0.81 | 2.84 | 9055 | 454 | 4 | 259 | 0 | 0 | 0 | logfile |
✔ | 7RU6 | 24698 | 2023-09-28 | 2021-08-16 | 4.4 | 4.33 | 3.79 | 4.2 | 0.003 | 0.59 | 0.0 | 0.04 | 15.25 | 0.00 | 2.027 | 10.32 | 0.00 | 0.3 | 99.7 | 0.0 | 3.15 | 0.71 | 0.67 | — | 4.2 | 0.002 | 0.50 | 0.0 | 0.03 | 13.30 | 0.00 | 2.118 | 7.19 | 0.34 | 1.9 | 98.1 | 0.0 | 4.08 | 0.78 | 0.74 | 0.70 | — | 5426 | 331 | 2 | 0 | 0 | 0 | 2725 | logfile |
✔ | 7QPC | 14117 | 2023-09-30 | 2022-01-03 | 3.44 | 3.64 | 3.38 | 3.7 | 0.003 | 1.07 | 0.0 | 0.04 | 14.77 | 0.00 | 2.199 | 5.74 | 0.00 | 2.5 | 97.5 | 0.0 | 1.61 | 0.59 | 0.79 | 1.03 | 3.7 | 0.003 | 0.54 | 0.0 | 0.03 | 15.30 | 0.00 | 2.115 | 7.87 | 0.00 | 3.1 | 96.9 | 0.0 | 1.53 | 0.28 | 0.58 | 0.80 | 1.35 | 10830 | 654 | 6 | 0 | 4 | 62 | 5540 | logfile |
✔ | 8THU | 41272 | 2023-09-30 | 2023-07-18 | 3.1 | 3.86 | 3.08 | 3.2 | 0.004 | 0.68 | 0.0 | 0.04 | 28.74 | 0.01 | 1.528 | 5.35 | 0.00 | 2.2 | 97.8 | 0.0 | 1.40 | 0.93 | 0.89 | 2.77 | 3.2 | 0.004 | 0.57 | 0.0 | 0.03 | 28.76 | 0.00 | 2.179 | 8.06 | 0.49 | 2.6 | 97.4 | 0.0 | 2.67 | 0.27 | 0.94 | 0.90 | 1.87 | 11902 | 760 | 10 | 291 | 0 | 0 | 0 | logfile |
✔ | 7F6V | 31482 | 2023-09-28 | 2021-06-25 | 3.66 | 4.27 | — | 4.2 | 0.005 | 0.77 | 0.0 | 0.05 | 14.14 | 0.00 | 2.356 | 10.62 | 0.00 | 6.8 | 93.2 | 0.0 | 0.27 | 0.60 | 0.78 | 1.08 | 4.2 | 0.003 | 0.65 | 0.0 | 0.03 | 17.58 | 0.00 | 2.249 | 9.40 | 0.18 | 4.4 | 95.6 | 0.0 | 4.28 | 0.84 | 0.60 | 0.77 | 0.75 | 5314 | 626 | 4 | 0 | 2 | 0 | 0 | logfile |
✔ | 7UTN | 26782 | 2023-09-28 | 2022-04-27 | 2.74 | 3.33 | 2.90 | 3.1 | 0.007 | 0.68 | 0.0 | 0.04 | 18.57 | 0.00 | 2.080 | 8.58 | 0.00 | 1.8 | 98.2 | 0.0 | 0.01 | 0.86 | 0.88 | 4.65 | 3.1 | 0.002 | 0.52 | 0.0 | 0.03 | 18.32 | 0.00 | 2.194 | 7.85 | 0.58 | 1.5 | 98.5 | 0.0 | 1.03 | 0.32 | 0.82 | 0.84 | 3.64 | 8003 | 397 | 4 | 228 | 0 | 0 | 0 | logfile |
✔ | 7CR1 | 30444 | 2023-09-28 | 2020-08-12 | 3.4 | 3.42 | — | 3.5 | 0.012 | 0.73 | 0.0 | 0.04 | 14.92 | 0.00 | 2.185 | 26.22 | 0.00 | 4.1 | 95.9 | 0.0 | -2.00 | 0.59 | 0.82 | 3.14 | 3.5 | 0.003 | 0.53 | 0.0 | 0.03 | 16.48 | 0.00 | 2.133 | 7.37 | 0.60 | 2.2 | 97.8 | 0.0 | 2.94 | 1.18 | 0.58 | 0.81 | 1.83 | 8220 | 1000 | 8 | 0 | 4 | 0 | 0 | logfile |
✔ | 7CR0 | 30443 | 2023-09-28 | 2020-08-12 | 3.1 | 3.35 | — | 3.4 | 0.005 | 0.63 | 0.0 | 0.04 | 14.38 | 0.00 | 2.212 | 5.87 | 0.00 | 4.0 | 96.0 | 0.0 | -4.99 | 0.58 | 0.82 | 3.75 | 3.4 | 0.003 | 0.59 | 0.0 | 0.03 | 15.47 | 0.00 | 2.219 | 7.51 | 0.12 | 3.4 | 96.6 | 0.0 | 2.81 | 0.56 | 0.57 | 0.81 | 2.63 | 8188 | 1004 | 4 | 0 | 0 | 0 | 0 | logfile |
✔ | 7NL0 | 12453 | 2023-09-30 | 2021-02-19 | 3.5 | 3.08 | — | 3.0 | 0.006 | 0.71 | 0.0 | 0.04 | 29.75 | 0.00 | 2.147 | 12.17 | 0.00 | 4.1 | 95.9 | 0.0 | 0.67 | 0.78 | 0.81 | 3.10 | 3.1 | 0.003 | 0.60 | 0.0 | 0.03 | 29.96 | 0.00 | 2.230 | 10.86 | 0.48 | 2.6 | 97.4 | 0.0 | 2.41 | 0.26 | 0.77 | 0.81 | 2.77 | 11363 | 755 | 10 | 262 | 0 | 0 | 0 | logfile |
✔ | 6VPS | 21316 | 2023-09-27 | 2020-02-04 | 2.6 | 2.62 | 2.52 | 2.7 | 0.011 | 1.14 | 10.0 | 0.13 | 20.44 | 0.01 | 2.501 | 19.04 | 0.00 | 6.9 | 93.1 | 0.0 | -3.61 | 0.49 | 0.90 | 6.11 | 2.7 | 0.003 | 0.51 | 0.0 | 0.03 | 20.10 | 0.00 | 2.351 | 3.30 | 1.31 | 6.9 | 93.1 | 0.0 | -3.83 | 1.19 | 0.47 | 0.87 | 6.39 | 2736 | 279 | 9 | 0 | 0 | 0 | 0 | logfile |
✔ | 5LMQ | 4076 | 2023-09-28 | 2016-08-01 | 4.2 | 4.46 | 4.25 | 4.2 | 0.009 | 1.44 | 30.0 | 0.12 | 20.84 | 0.02 | 1.387 | 19.43 | 21.46 | 10.5 | 86.1 | 3.4 | -2.56 | 0.80 | 0.76 | — | 4.2 | 0.003 | 0.72 | 0.0 | 0.03 | 16.43 | 0.01 | 1.903 | 23.92 | 0.05 | 7.4 | 92.2 | 0.5 | -1.12 | 1.62 | 0.84 | 0.84 | — | 55841 | 2635 | 29 | 1612 | 66 | 0 | 0 | logfile |
✔ | 7PMW | 13542 | 2023-09-30 | 2021-09-03 | 4.1 | 4.24 | 4.05 | 4.1 | 0.002 | 0.47 | 1.0 | 0.04 | 9.25 | 0.00 | 2.047 | 8.47 | 0.91 | 2.8 | 97.2 | 0.0 | 0.56 | 0.58 | 0.75 | — | 4.1 | 0.003 | 0.56 | 0.0 | 0.04 | 11.57 | 0.00 | 2.051 | 9.95 | 0.00 | 3.0 | 97.0 | 0.0 | 0.81 | 1.20 | 0.58 | 0.76 | — | 10153 | 643 | 2 | 0 | 0 | 0 | 5123 | logfile |
✔ | 7VEA | 31944 | 2023-09-29 | 2021-09-08 | 3.7 | 3.55 | — | 3.5 | 0.009 | 1.13 | 0.0 | 0.04 | 13.48 | 0.00 | 2.098 | 6.48 | 0.58 | 1.5 | 98.4 | 0.0 | 2.51 | 0.65 | 0.78 | 1.44 | 3.5 | 0.004 | 0.77 | 0.0 | 0.04 | 16.55 | 0.00 | 2.063 | 15.67 | 0.57 | 2.2 | 97.7 | 0.0 | 2.25 | 1.43 | 0.69 | 0.77 | 1.04 | 111542 | 15594 | 165 | 0 | 84 | 0 | 0 | logfile |
✔ | 7FiM | 31603 | 2023-09-29 | 2021-07-31 | 3.4 | 3.76 | — | 3.8 | 0.004 | 0.83 | 0.0 | 0.05 | 13.92 | 0.01 | 2.226 | 7.19 | 0.41 | 2.3 | 97.7 | 0.0 | -2.72 | 0.56 | 0.64 | 1.94 | 3.8 | 0.003 | 0.63 | 0.0 | 0.04 | 16.32 | 0.00 | 2.169 | 9.17 | 0.81 | 2.9 | 97.1 | 0.0 | -0.65 | 0.85 | 0.70 | 0.81 | 1.23 | 9213 | 1157 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 8DY7 | 27777 | 2023-09-30 | 2022-08-03 | 3.18 | 3.44 | 3.26 | 3.4 | 0.003 | 0.65 | 0.0 | 0.04 | 17.36 | 0.00 | 1.507 | 3.64 | 0.00 | 4.3 | 95.7 | 0.0 | 0.22 | 0.71 | 0.81 | 2.62 | 3.4 | 0.004 | 0.64 | 0.0 | 0.04 | 18.37 | 0.00 | 1.932 | 5.03 | 0.13 | 5.3 | 94.7 | 0.0 | 0.10 | 0.29 | 0.72 | 0.84 | 2.35 | 61085 | 3612 | 14 | 149 | 5 | 0 | 29915 | logfile |
✔ | 7X7R | 33046 | 2023-09-30 | 2022-03-10 | 3.5 | 4.18 | 3.46 | 4.1 | 0.002 | 0.58 | 0.0 | 0.04 | 16.46 | 0.00 | 2.058 | 11.61 | 0.00 | 7.7 | 92.3 | 0.0 | -1.19 | 0.71 | 0.68 | 1.20 | 4.1 | 0.003 | 0.65 | 0.0 | 0.04 | 18.04 | 0.00 | 2.015 | 14.33 | 0.33 | 9.0 | 91.0 | 0.0 | -1.21 | 1.03 | 0.66 | 0.65 | 0.99 | 10529 | 1237 | 3 | 56 | 4 | 0 | 0 | logfile |
✔ | 6SZ9 | 10350 | 2023-09-30 | 2019-10-02 | 3.7 | 4.00 | 3.73 | 3.9 | 0.005 | 0.82 | 0.0 | 0.05 | 15.57 | 0.01 | 2.293 | 6.37 | 0.27 | 3.2 | 96.8 | 0.0 | -3.82 | 0.77 | 0.79 | 1.44 | 3.9 | 0.003 | 0.65 | 0.0 | 0.04 | 16.73 | 0.00 | 2.149 | 11.04 | 0.27 | 3.8 | 96.2 | 0.0 | -0.20 | 0.56 | 0.77 | 0.79 | 1.10 | 10233 | 1290 | 6 | 0 | 1 | 0 | 0 | logfile |
✔ | 7Uo0 | 26636 | 2023-09-30 | 2022-04-12 | 3.4 | 4.47 | — | 3.5 | 0.003 | 2.23 | 0.0 | 0.11 | 24.66 | 0.00 | 2.117 | 7.29 | 2.04 | 6.4 | 93.6 | 0.0 | -0.20 | 0.73 | 0.34 | 1.64 | 3.5 | 0.004 | 0.81 | 0.0 | 0.04 | 26.37 | 0.01 | 2.073 | 21.62 | 1.02 | 9.1 | 90.9 | 0.0 | -3.24 | 4.74 | 0.83 | 0.62 | 1.06 | 10697 | 112 | 4 | 455 | 7 | 0 | 0 | logfile |