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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 7S37 | 24818 | 2023-02-19 | 2021-09-04 | 3.2 | 3.10 | 3.27 | 2.3 | 0.006 | 1.04 | 0.0 | 0.05 | 12.76 | 0.01 | 2.211 | 4.66 | 0.11 | 3.7 | 96.3 | 0.0 | -1.48 | 0.74 | 0.62 | 0.31 | 2.2 | 0.003 | 0.70 | 0.0 | 0.04 | 16.14 | 0.01 | 2.116 | 15.43 | 0.54 | 3.3 | 96.7 | 0.0 | 0.14 | 1.48 | 0.77 | 0.67 | 0.49 | 9392 | 1033 | 2 | 46 | 0 | 0 | 0 | logfile |
✔ | 7F5V | 31468 | 2023-02-23 | 2021-06-22 | 3.6 | 4.00 | 3.42 | 3.9 | 0.005 | 0.69 | 0.0 | 0.04 | 13.93 | 0.00 | 2.076 | 16.85 | 0.18 | 6.9 | 93.0 | 0.1 | -4.69 | 0.75 | 0.80 | 1.04 | 3.9 | 0.005 | 0.72 | 0.0 | 0.04 | 15.92 | 0.00 | 2.060 | 17.19 | 0.27 | 7.0 | 93.0 | 0.0 | -1.42 | 1.22 | 0.74 | 0.79 | 0.49 | 20912 | 2760 | 4 | 0 | 0 | 0 | 0 | logfile |
✔ | 6ZiT | 11229 | 2023-02-23 | 2020-06-26 | 3.49 | 3.68 | 4.20 | 3.5 | 0.005 | 0.74 | 0.0 | 0.04 | 15.19 | 0.01 | 1.968 | 23.60 | 0.00 | 10.6 | 89.4 | 0.0 | -1.92 | 0.49 | 0.72 | 0.69 | 3.5 | 0.003 | 0.60 | 0.0 | 0.04 | 16.48 | 0.00 | 1.970 | 12.86 | 0.28 | 5.1 | 94.9 | 0.0 | 0.40 | 0.55 | 0.49 | 0.72 | 0.49 | 20646 | 1300 | 15 | 0 | 0 | 0 | 10446 | logfile |
✔ | 7T5P | 25706 | 2023-02-20 | 2021-12-13 | 3.4 | 3.23 | 3.35 | 2.2 | 0.003 | 0.59 | 0.0 | 0.04 | 17.85 | 0.00 | 1.971 | 15.23 | 0.39 | 4.7 | 95.3 | 0.0 | 1.09 | 0.76 | 0.73 | 0.61 | 2.2 | 0.003 | 0.60 | 0.0 | 0.04 | 17.97 | 0.00 | 1.945 | 15.97 | 0.52 | 5.4 | 94.6 | 0.0 | 1.62 | 0.38 | 0.77 | 0.74 | 0.50 | 13597 | 822 | 2 | 0 | 0 | 0 | 6866 | logfile |
✔ | 7XDT | 33152 | 2023-02-23 | 2022-03-28 | 3.31 | 3.64 | 3.32 | 3.5 | 0.003 | 0.61 | 0.0 | 0.04 | 17.78 | 0.01 | 2.081 | 11.26 | 0.23 | 5.2 | 94.8 | 0.0 | -0.03 | 0.72 | 0.65 | 0.76 | 3.5 | 0.003 | 0.62 | 0.0 | 0.04 | 18.54 | 0.00 | 2.052 | 12.79 | 0.54 | 5.4 | 94.6 | 0.0 | 0.47 | 0.55 | 0.76 | 0.70 | 0.50 | 41990 | 5310 | 10 | 0 | 0 | 0 | 0 | logfile |
✔ | 6UZ3 | 20951 | 2023-02-19 | 2019-11-14 | 3.5 | 3.88 | — | 3.8 | 0.022 | 1.32 | 3.0 | 0.15 | 17.52 | 0.01 | 1.260 | 32.32 | 1.05 | 11.2 | 88.5 | 0.4 | -3.89 | 0.42 | 0.70 | 1.32 | 3.8 | 0.004 | 0.85 | 0.0 | 0.05 | 17.36 | 0.00 | 2.143 | 17.98 | 0.84 | 7.1 | 92.7 | 0.2 | -0.49 | 0.69 | 0.42 | 0.69 | 0.51 | 9446 | 1126 | 5 | 0 | 25 | 0 | 0 | logfile |
✔ | 6NoG | 0468 | 2023-02-23 | 2019-01-16 | 3.9 | 4.05 | 4.50 | 3.9 | 0.009 | 1.12 | 1.0 | 0.06 | 26.55 | 0.01 | 2.239 | 6.27 | 0.84 | 4.1 | 95.9 | 0.0 | -1.83 | 0.84 | 0.81 | 0.53 | 3.9 | 0.004 | 0.63 | 0.0 | 0.03 | 26.62 | 0.00 | 2.153 | 11.24 | 0.32 | 2.2 | 97.8 | 0.0 | 1.84 | 1.76 | 0.86 | 0.85 | 0.51 | 14929 | 1124 | 12 | 292 | 0 | 0 | 0 | logfile |
✔ | 6Qi8 | 4552 | 2023-02-21 | 2019-01-18 | 3.75 | 3.92 | — | 10.4 | 0.004 | 0.91 | 0.0 | 0.05 | 16.35 | 0.01 | 1.999 | 4.27 | 0.19 | 5.5 | 94.5 | 0.0 | -5.84 | 0.17 | 0.02 | 0.43 | 9.9 | 0.003 | 0.85 | 0.0 | 0.04 | 17.56 | 0.00 | 2.143 | 15.66 | 0.19 | 7.7 | 92.3 | 0.0 | -2.16 | 1.53 | 0.32 | 0.22 | 0.51 | 14789 | 1907 | 12 | 0 | 6 | 0 | 0 | logfile |
✔ | 7S1Y | 24812 | 2023-02-17 | 2021-09-02 | 3.6 | 3.90 | — | 3.9 | 0.005 | 0.77 | 2.0 | 0.04 | 12.89 | 0.01 | 1.566 | 12.97 | 0.00 | 7.2 | 92.6 | 0.2 | -0.33 | 0.40 | 0.55 | 0.33 | 3.9 | 0.003 | 0.72 | 2.0 | 0.04 | 14.86 | 0.00 | 2.189 | 13.61 | 0.52 | 6.9 | 92.9 | 0.2 | -0.45 | 0.58 | 0.51 | 0.64 | 0.51 | 6580 | 948 | 4 | 0 | 6 | 0 | 0 | logfile |
✔ | 7K8V | 22732 | 2023-02-25 | 2020-09-27 | 3.8 | 4.64 | — | 4.0 | 0.003 | 0.59 | 0.0 | 0.07 | 12.91 | 0.00 | 2.005 | 11.42 | 0.15 | 4.8 | 95.1 | 0.2 | -2.90 | 0.81 | 0.74 | 0.42 | 4.1 | 0.004 | 0.69 | 0.0 | 0.04 | 14.71 | 0.00 | 2.118 | 18.31 | 0.48 | 6.1 | 93.8 | 0.1 | -1.45 | 0.78 | 0.83 | 0.80 | 0.52 | 26248 | 3390 | 20 | 0 | 41 | 0 | 0 | logfile |
✔ | 7WV9 | 32850 | 2023-02-18 | 2022-02-10 | 3.36 | 3.51 | — | 3.6 | 0.005 | 0.77 | 0.0 | 0.05 | 13.78 | 0.00 | 2.206 | 11.90 | 0.53 | 5.0 | 94.9 | 0.1 | -0.80 | 0.57 | 0.67 | 1.09 | 3.6 | 0.002 | 0.60 | 0.0 | 0.04 | 15.49 | 0.00 | 2.234 | 12.58 | 0.32 | 4.6 | 95.4 | 0.0 | -0.65 | 0.94 | 0.59 | 0.71 | 0.52 | 8848 | 1141 | 6 | 0 | 2 | 0 | 0 | logfile |
✔ | 6QB8 | 4489 | 2023-02-23 | 2018-12-20 | 3.97 | 4.19 | — | 2.3 | 0.005 | 0.96 | 0.0 | 0.06 | 15.67 | 0.01 | 2.238 | 11.60 | 0.76 | 8.2 | 91.8 | 0.0 | -4.47 | 0.89 | 0.77 | 0.40 | 2.1 | 0.004 | 0.79 | 0.0 | 0.05 | 16.49 | 0.00 | 2.037 | 28.19 | 0.27 | 9.0 | 91.0 | 0.0 | -1.64 | 1.54 | 0.89 | 0.80 | 0.52 | 60035 | 7870 | 18 | 0 | 2 | 0 | 0 | logfile |
✔ | 7USY | 26743 | 2023-02-22 | 2022-04-26 | 3.54 | 3.90 | 3.64 | 3.9 | 0.004 | 0.78 | 0.0 | 0.04 | 16.46 | 0.01 | 1.415 | 8.72 | 0.28 | 3.0 | 97.0 | 0.0 | 1.55 | 0.56 | 0.69 | 0.66 | 3.8 | 0.003 | 0.54 | 0.0 | 0.04 | 16.79 | 0.00 | 2.197 | 7.85 | 0.34 | 2.8 | 97.2 | 0.0 | 1.72 | 0.42 | 0.54 | 0.64 | 0.53 | 16582 | 2025 | 13 | 0 | 16 | 0 | 0 | logfile |
✔ | 6W8P | 21577 | 2023-02-17 | 2020-03-21 | 3.6 | 4.05 | — | 4.0 | 0.004 | 0.76 | 0.0 | 0.04 | 18.04 | 0.00 | 2.236 | 14.92 | 10.89 | 10.4 | 89.6 | 0.0 | -3.47 | 0.57 | 0.80 | 0.57 | 4.0 | 0.004 | 0.80 | 0.0 | 0.04 | 17.40 | 0.00 | 2.216 | 14.38 | 0.86 | 9.4 | 90.6 | 0.0 | -0.22 | 2.10 | 0.57 | 0.78 | 0.53 | 6509 | 844 | 4 | 0 | 3 | 0 | 0 | logfile |
✔ | 7BW8 | 30230 | 2023-02-17 | 2020-04-14 | 3.8 | 4.16 | 3.79 | 4.4 | 0.009 | 1.38 | 0.0 | 0.07 | 17.39 | 0.01 | 1.974 | 49.64 | 0.00 | 22.3 | 77.7 | 0.0 | -5.01 | 0.70 | 0.66 | 0.41 | 4.4 | 0.003 | 0.93 | 0.0 | 0.05 | 18.23 | 0.01 | 2.200 | 21.41 | 0.88 | 10.6 | 89.4 | 0.0 | -3.01 | 2.07 | 0.68 | 0.63 | 0.53 | 6021 | 737 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 7S8U | 24922 | 2023-02-17 | 2021-09-19 | 3.7 | 3.97 | — | 3.9 | 0.008 | 1.19 | 1.0 | 0.07 | 14.00 | 0.01 | 2.243 | 13.10 | 4.56 | 8.3 | 90.5 | 1.2 | -1.14 | 0.48 | 0.59 | 0.59 | 3.9 | 0.004 | 0.86 | 0.0 | 0.05 | 16.32 | 0.01 | 2.069 | 18.36 | 0.88 | 9.6 | 89.9 | 0.5 | -0.50 | 1.41 | 0.51 | 0.62 | 0.54 | 5210 | 667 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 6LAR | 0862 | 2023-02-24 | 2019-11-13 | 3.7 | 4.08 | — | 4.0 | 0.007 | 0.99 | 0.0 | 0.05 | 15.43 | 0.01 | 1.858 | 20.21 | 5.47 | 13.2 | 86.4 | 0.4 | -4.82 | 0.65 | 0.76 | 0.98 | 4.0 | 0.003 | 0.78 | 0.0 | 0.04 | 15.86 | 0.00 | 2.160 | 12.49 | 0.43 | 8.6 | 91.4 | 0.0 | -0.58 | 1.21 | 0.64 | 0.76 | 0.54 | 22448 | 3020 | 10 | 0 | 0 | 0 | 0 | logfile |
✔ | 6WFQ | 21652 | 2023-02-17 | 2020-04-03 | 3.9 | 4.88 | 3.77 | 3.9 | 0.002 | 0.49 | 0.0 | 0.03 | 16.66 | 0.00 | 2.265 | 8.11 | 0.80 | 4.3 | 95.7 | 0.0 | -2.49 | 0.84 | 0.78 | 0.76 | 3.8 | 0.003 | 0.92 | 0.0 | 0.04 | 19.12 | 0.00 | 2.154 | 16.10 | 0.00 | 6.3 | 93.7 | 0.0 | -0.17 | 0.73 | 0.85 | 0.80 | 0.54 | 4164 | 447 | 4 | 30 | 0 | 0 | 0 | logfile |
✔ | 7KVF | 23049 | 2023-02-20 | 2020-11-28 | 3.6 | 4.39 | 3.76 | 3.6 | 0.005 | 0.82 | 2.0 | 0.05 | 14.67 | 0.00 | 2.204 | 17.23 | 0.57 | 18.2 | 81.4 | 0.4 | -5.88 | 0.82 | 0.66 | 1.37 | 3.6 | 0.003 | 0.80 | 0.0 | 0.05 | 16.13 | 0.00 | 2.157 | 16.77 | 0.00 | 11.9 | 88.1 | 0.0 | -3.74 | 2.39 | 0.87 | 0.76 | 0.54 | 11142 | 1374 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 8EFD | 28080 | 2023-02-18 | 2022-09-08 | 3.8 | 4.67 | 3.83 | 3.9 | 0.002 | 0.49 | 0.0 | 0.04 | 14.10 | 0.00 | 2.048 | 8.46 | 0.13 | 3.8 | 96.2 | 0.0 | 0.81 | 0.88 | 0.79 | 0.38 | 3.9 | 0.002 | 0.61 | 0.0 | 0.04 | 15.94 | 0.00 | 2.165 | 13.04 | 0.26 | 4.5 | 95.5 | 0.0 | 0.71 | 0.55 | 0.88 | 0.80 | 0.54 | 7107 | 886 | 2 | 0 | 0 | 0 | 0 | logfile |