The table shows a selection of parameters. Activate more columns using
the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 6TMH | 10521 | 2023-02-24 | 2019-12-04 | 3.1 | 3.11 | 3.02 | 3.1 | 0.009 | 0.70 | 0.0 | 0.05 | 14.39 | 0.00 | 1.798 | 3.85 | 0.29 | 4.5 | 95.5 | 0.0 | -1.93 | 0.74 | 0.85 | 3.59 | 3.1 | 0.003 | 0.56 | 0.0 | 0.05 | 15.87 | 0.00 | 1.722 | 6.19 | 0.23 | 3.3 | 96.7 | 0.0 | 0.62 | 0.80 | 0.75 | 0.88 | 3.23 | 65358 | 4264 | 26 | 0 | 10 | 0 | 32948 | logfile |
✔ | 7Uo1 | 26637 | 2023-02-22 | 2022-04-12 | 3.2 | 3.31 | — | 3.3 | 0.002 | 4.43 | 0.0 | 0.10 | 27.22 | 0.00 | 1.799 | 11.73 | 0.00 | 4.5 | 92.7 | 2.7 | 0.03 | 0.51 | 0.54 | 2.38 | 3.2 | 0.005 | 1.86 | 0.0 | 0.24 | 27.85 | 0.01 | 1.728 | 26.76 | 1.02 | 7.3 | 92.7 | 0.0 | -0.76 | 1.82 | 0.58 | 0.66 | 2.01 | 16588 | 112 | 4 | 455 | 10 | 0 | 5894 | logfile |
✔ | 6WVM | 21923 | 2023-02-25 | 2020-05-06 | 3.3 | 3.76 | 3.18 | 3.8 | 0.013 | 1.96 | 6.0 | 0.10 | 16.19 | 0.02 | 1.972 | 0.67 | 0.55 | 1.9 | 98.1 | 0.0 | -1.87 | 0.45 | 0.49 | 0.62 | 3.6 | 0.003 | 0.67 | 0.0 | 0.04 | 17.24 | 0.00 | 1.730 | 11.49 | 0.55 | 2.9 | 97.1 | 0.0 | 0.10 | 2.54 | 0.54 | 0.78 | 2.44 | 26744 | 1712 | 8 | 2 | 6 | 0 | 13046 | logfile |
✔ | 7M4U | 23666 | 2023-02-21 | 2021-03-22 | 2.71 | 1.78 | — | 1.6 | 0.006 | 0.58 | 2.0 | 0.04 | 14.94 | 0.02 | 1.771 | 4.42 | 0.20 | 3.1 | 96.7 | 0.2 | 1.08 | 0.79 | 0.76 | 3.70 | 1.6 | 0.004 | 0.76 | 0.0 | 0.04 | 16.09 | 0.01 | 1.732 | 5.99 | 2.36 | 3.6 | 96.2 | 0.2 | 0.59 | 1.72 | 0.82 | 0.81 | 3.40 | 51764 | 2386 | 27 | 1528 | 84 | 191 | 0 | logfile |
✔ | 5H3o | 6656 | 2023-02-22 | 2016-10-26 | 3.5 | 3.66 | — | 3.6 | 0.015 | 1.48 | 4.0 | 0.08 | 16.00 | 0.01 | 2.235 | 19.87 | 6.55 | 6.0 | 93.4 | 0.6 | -3.19 | 0.78 | 0.86 | 1.93 | 3.6 | 0.003 | 0.73 | 0.0 | 0.04 | 17.32 | 0.00 | 1.733 | 13.35 | 0.43 | 3.0 | 97.0 | 0.0 | 0.89 | 0.82 | 0.73 | 0.81 | 1.00 | 16958 | 2040 | 8 | 0 | 7 | 0 | 0 | logfile |
✔ | 7YE2 | 33762 | 2023-02-26 | 2022-07-05 | 3.8 | 3.90 | 3.77 | 3.8 | 0.008 | 0.69 | 0.0 | 0.04 | 16.42 | 0.00 | 2.073 | 47.96 | 0.35 | 5.4 | 94.6 | 0.0 | -3.04 | 0.73 | 0.73 | 1.32 | 3.8 | 0.004 | 0.64 | 0.0 | 0.04 | 18.66 | 0.00 | 1.736 | 75.87 | 1.23 | 11.5 | 88.5 | 0.0 | -1.23 | 1.23 | 0.76 | 0.78 | 1.78 | 28925 | 3588 | 11 | 136 | 4 | 0 | 12 | logfile |
✔ | 7PTL | 13630 | 2023-02-24 | 2021-09-27 | 4.9 | 10.06 | 4.95 | — | 0.005 | 1.01 | 0.0 | 0.06 | 16.11 | 0.01 | 2.401 | 0.61 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.88 | 0.79 | — | — | 0.007 | 0.90 | 0.0 | 0.04 | 21.29 | 0.01 | 1.737 | 86.57 | 0.00 | 0.0 | 0.0 | 0.0 | — | 3.52 | 0.91 | 0.92 | — | 23080 | 0 | 1 | 720 | 0 | 0 | 7743 | logfile |
✔ | 6HZ8 | 0314 | 2023-02-26 | 2018-10-22 | 4.3 | 4.47 | 4.31 | 4.4 | 0.009 | 0.99 | 0.0 | 0.05 | 14.59 | 0.01 | 1.943 | 3.29 | 0.59 | 2.7 | 97.3 | 0.0 | -0.48 | 0.77 | 0.73 | — | 4.4 | 0.005 | 0.67 | 0.0 | 0.04 | 14.60 | 0.00 | 1.739 | 14.95 | 0.00 | 5.3 | 94.7 | 0.0 | -0.46 | 1.89 | 0.79 | 0.76 | — | 67582 | 4120 | 26 | 6 | 12 | 0 | 33368 | logfile |
✔ | 7AFH | 11765 | 2023-02-22 | 2020-09-19 | 3.59 | 4.69 | 6.65 | 2.8 | 0.009 | 0.89 | 2.0 | 0.05 | 16.78 | 0.02 | 1.752 | 32.72 | 0.00 | 7.5 | 92.5 | 0.0 | -2.59 | 0.88 | 0.82 | 0.54 | 2.8 | 0.006 | 0.83 | 0.0 | 0.04 | 17.03 | 0.01 | 1.745 | 31.31 | 0.87 | 5.3 | 94.7 | 0.0 | -1.07 | 1.30 | 0.89 | 0.86 | 0.79 | 18482 | 1103 | 11 | 456 | 12 | 0 | 0 | logfile |
✔ | 7LQE | 23483 | 2023-02-17 | 2021-02-13 | 3.4 | 3.06 | — | 3.4 | 0.016 | 1.42 | 0.0 | 0.04 | 20.72 | 0.00 | 2.423 | 23.27 | 14.58 | 0.0 | 100.0 | 0.0 | -5.94 | 0.57 | 0.80 | 5.06 | 3.2 | 0.151 | 5.20 | 240.0 | 0.38 | 25.46 | 0.02 | 1.745 | 134.94 | 4.40 | 60.8 | 38.2 | 1.0 | -8.67 | 1.67 | 0.65 | 0.89 | 2.25 | 6048 | 576 | 72 | 0 | 0 | 0 | 0 | logfile |
✔ | 6UVN | 20908 | 2023-02-27 | 2019-11-03 | 3.1 | 2.62 | — | 2.0 | 0.010 | 0.84 | 1.0 | 0.05 | 14.35 | 0.00 | 2.114 | 19.06 | 0.52 | 8.1 | 91.8 | 0.1 | -3.87 | 0.89 | 0.81 | 2.57 | 2.0 | 0.005 | 0.66 | 0.0 | 0.04 | 15.79 | 0.00 | 1.746 | 14.24 | 0.23 | 6.6 | 93.4 | 0.0 | -1.26 | 0.48 | 0.90 | 0.82 | 2.32 | 29487 | 3461 | 14 | 61 | 83 | 0 | 0 | logfile |
✔ | 7UiN | 26550 | 2023-02-21 | 2022-03-29 | 2.8 | 2.99 | 2.83 | 3.0 | 0.010 | 1.21 | 1.0 | 0.05 | 19.72 | 0.01 | 1.477 | 4.43 | 2.93 | 3.7 | 95.8 | 0.5 | -1.14 | 0.71 | 0.80 | 2.44 | 3.0 | 0.005 | 0.68 | 0.0 | 0.04 | 19.50 | 0.01 | 1.748 | 11.10 | 3.81 | 3.4 | 96.1 | 0.5 | 0.38 | 0.92 | 0.72 | 0.85 | 2.57 | 15585 | 387 | 5 | 578 | 30 | 24 | 0 | logfile |
✔ | 7XSK | 33425 | 2023-02-20 | 2022-05-14 | 3.53 | 4.49 | 3.42 | 3.4 | 0.001 | 0.44 | 0.0 | 0.02 | 15.94 | 0.00 | 1.970 | 6.98 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.90 | 0.76 | — | 3.4 | 0.007 | 0.68 | 0.0 | 0.04 | 18.66 | 0.01 | 1.750 | 33.29 | 0.00 | 0.0 | 0.0 | 0.0 | — | 1.90 | 0.91 | 0.83 | — | 12467 | 0 | 1 | 388 | 0 | 0 | 4168 | logfile |
✔ | 6PB5 | 20287 | 2023-02-27 | 2019-06-13 | 4.52 | 5.95 | — | 8.8 | 0.011 | 1.31 | 0.0 | 0.06 | 16.15 | 0.01 | 1.966 | 13.18 | 0.26 | 11.6 | 87.7 | 0.7 | -4.55 | 0.58 | 0.19 | — | 4.0 | 0.004 | 0.80 | 0.0 | 0.04 | 16.87 | 0.01 | 1.752 | 28.81 | 0.00 | 11.3 | 88.5 | 0.2 | -3.26 | 2.26 | 0.78 | 0.63 | — | 69696 | 4084 | 13 | 156 | 5 | 0 | 34319 | logfile |
✔ | 7NJ3 | 12371 | 2023-02-26 | 2021-02-15 | 4.48 | 4.72 | — | 4.6 | 0.004 | 0.70 | 1.0 | 0.05 | 13.64 | 0.00 | 1.907 | 8.92 | 0.38 | 4.2 | 95.8 | 0.0 | -0.73 | 0.57 | 0.36 | — | 4.6 | 0.006 | 0.81 | 0.0 | 0.04 | 13.81 | 0.01 | 1.754 | 25.03 | 0.00 | 8.4 | 91.6 | 0.0 | -2.08 | 2.79 | 0.72 | 0.62 | — | 28778 | 1795 | 6 | 23 | 0 | 0 | 13868 | logfile |
✔ | 7Z2C | 14461 | 2023-02-20 | 2022-02-26 | 4.1 | 4.33 | — | 4.0 | 0.012 | 1.59 | 2.0 | 0.09 | 14.56 | 0.01 | 1.174 | 9.07 | 0.48 | 3.0 | 96.8 | 0.2 | -0.04 | 0.76 | 0.61 | — | 4.0 | 0.004 | 0.64 | 0.0 | 0.04 | 13.72 | 0.00 | 1.756 | 58.61 | 0.00 | 5.8 | 94.1 | 0.1 | -0.41 | 2.89 | 0.86 | 0.77 | — | 12037 | 1201 | 5 | 0 | 4 | 0 | 2554 | logfile |
✔ | 7R6M | 24282 | 2023-02-18 | 2021-06-22 | 3.68 | 3.27 | — | 3.4 | 0.006 | 0.94 | 0.0 | 0.04 | 17.86 | 0.01 | 2.005 | 4.72 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.53 | 0.72 | — | 3.4 | 0.007 | 0.85 | 0.0 | 0.04 | 18.31 | 0.01 | 1.758 | 16.73 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.19 | 0.53 | 0.72 | — | 7755 | 0 | 3 | 362 | 13 | 0 | 0 | logfile |
✔ | 7NB8 | 12257 | 2023-02-22 | 2021-01-25 | 4.4 | 4.42 | — | 4.2 | 0.018 | 1.79 | 1.0 | 0.09 | 11.88 | 0.01 | 1.811 | 2.04 | 0.10 | 2.8 | 96.8 | 0.3 | 0.01 | 0.85 | 0.67 | — | 4.2 | 0.003 | 0.62 | 0.0 | 0.04 | 13.48 | 0.00 | 1.758 | 12.21 | 0.00 | 5.1 | 94.8 | 0.1 | -0.22 | 2.09 | 0.90 | 0.79 | — | 18570 | 1177 | 5 | 0 | 4 | 0 | 9185 | logfile |
✔ | 6KPH | 0746 | 2023-02-24 | 2019-08-15 | 2.41 | 3.45 | — | 3.2 | 0.014 | 1.03 | 0.0 | 0.15 | 13.22 | 0.00 | 1.838 | 8.27 | 0.00 | 8.5 | 91.5 | 0.0 | -4.25 | 0.81 | 0.85 | 4.19 | 3.2 | 0.005 | 0.76 | 0.0 | 0.15 | 14.91 | 0.00 | 1.763 | 7.92 | 0.75 | 4.1 | 95.9 | 0.0 | 0.11 | 0.81 | 0.80 | 0.86 | 4.38 | 62832 | 3936 | 24 | 0 | 48 | 0 | 31212 | logfile |
✔ | 7NBA | 12258 | 2023-02-22 | 2021-01-25 | 4.0 | 3.33 | — | 3.9 | 0.019 | 1.90 | 0.0 | 0.09 | 11.93 | 0.01 | 1.868 | 1.01 | 0.00 | 2.8 | 97.0 | 0.3 | 0.17 | 0.79 | 0.60 | — | 3.9 | 0.004 | 0.70 | 0.0 | 0.04 | 16.95 | 0.00 | 1.763 | 18.59 | 0.77 | 6.7 | 93.3 | 0.0 | -0.50 | 2.53 | 0.86 | 0.77 | — | 18742 | 1185 | 6 | 0 | 6 | 0 | 9257 | logfile |