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Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 8AFL | 15401 | 2024-03-10 | 2022-07-18 | 4.4 | 3.03 | 4.24 | 2.2 | 0.004 | 0.74 | 0.0 | 0.04 | 15.27 | 0.00 | 2.153 | 18.68 | 0.25 | 8.4 | 91.6 | 0.0 | -3.48 | 0.59 | 0.59 | — | 2.1 | 0.004 | 0.73 | 0.0 | 0.04 | 15.42 | 0.00 | 2.158 | 16.25 | 0.00 | 6.5 | 93.5 | 0.0 | -1.48 | 0.80 | 0.59 | 0.59 | — | 3921 | 505 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 6C53 | 7342 | 2024-03-15 | 2018-01-13 | 4.2 | 4.25 | — | 4.1 | 0.006 | 0.92 | 0.0 | 0.05 | 9.18 | 0.00 | 2.150 | 7.71 | 0.00 | 7.9 | 92.1 | 0.0 | -4.46 | 0.69 | 0.76 | — | 4.1 | 0.003 | 0.72 | 0.0 | 0.04 | 12.04 | 0.00 | 2.224 | 23.16 | 0.00 | 4.8 | 95.2 | 0.0 | -2.08 | 1.99 | 0.71 | 0.80 | — | 12023 | 1716 | 11 | 0 | 0 | 0 | 0 | logfile |
✔ | 7TT5 | 26111 | 2024-03-16 | 2022-01-31 | 4.3 | 4.48 | — | 4.4 | 0.004 | 0.69 | 0.0 | 0.04 | 10.02 | 0.01 | 2.033 | 4.14 | 0.00 | 0.9 | 99.1 | 0.0 | 1.26 | 0.65 | 0.70 | — | 4.3 | 0.003 | 0.54 | 0.0 | 0.04 | 12.07 | 0.00 | 1.888 | 7.23 | 0.00 | 2.5 | 97.5 | 0.0 | 0.64 | 1.18 | 0.68 | 0.77 | — | 14255 | 928 | 5 | 0 | 0 | 0 | 6938 | logfile |
✔ | 8G6i | 29770 | 2024-03-16 | 2023-02-15 | 4.23 | 4.53 | 4.35 | 4.2 | 0.003 | 0.68 | 0.0 | 0.05 | 13.13 | 0.01 | 2.143 | 10.55 | 0.00 | 9.3 | 90.4 | 0.3 | -3.49 | 0.69 | 0.42 | — | 4.2 | 0.003 | 0.75 | 0.0 | 0.05 | 13.86 | 0.00 | 2.177 | 18.67 | 0.00 | 12.8 | 86.9 | 0.3 | -3.82 | 2.53 | 0.73 | 0.53 | — | 13287 | 1665 | 5 | 0 | 4 | 0 | 0 | logfile |
✔ | 7YN0 | 33949 | 2024-03-20 | 2022-07-29 | 4.1 | 4.36 | 4.06 | 4.2 | 0.005 | 0.83 | 6.0 | 0.06 | 18.73 | 0.01 | 2.218 | 5.68 | 0.30 | 5.1 | 94.7 | 0.2 | -0.74 | 0.84 | 0.79 | — | 4.2 | 0.003 | 0.67 | 0.0 | 0.04 | 15.42 | 0.00 | 2.100 | 12.70 | 0.00 | 6.2 | 93.8 | 0.0 | -0.61 | 1.61 | 0.85 | 0.81 | — | 27912 | 3498 | 21 | 0 | 63 | 0 | 0 | logfile |
✔ | 7NCJ | 12268 | 2024-03-15 | 2021-01-28 | 4.23 | 3.11 | 3.97 | 4.5 | 0.011 | 1.60 | 2.0 | 0.10 | 13.68 | 0.01 | 2.444 | 0.18 | 0.76 | 7.7 | 92.0 | 0.3 | -2.36 | 0.65 | 0.46 | — | 4.3 | 0.003 | 0.63 | 1.0 | 0.05 | 14.34 | 0.00 | 1.937 | 16.69 | 0.00 | 10.8 | 89.2 | 0.0 | -3.10 | 1.40 | 0.70 | 0.58 | — | 10860 | 774 | 12 | 0 | 0 | 0 | 5586 | logfile |
✔ | 8oSL | 17160 | 2024-03-16 | 2023-04-19 | 4.9 | 8.34 | 6.27 | 6.8 | 0.005 | 0.80 | 0.0 | 0.05 | 28.01 | 0.00 | 2.363 | 2.30 | 0.00 | 1.1 | 98.9 | 0.0 | -0.07 | 0.81 | 0.71 | — | 7.0 | 0.012 | 1.04 | 0.0 | 0.06 | 35.58 | 0.01 | 1.810 | 186.47 | 0.00 | 13.0 | 86.5 | 0.5 | -2.30 | 3.51 | 0.87 | 0.83 | — | 13541 | 1441 | 14 | 294 | 0 | 0 | 301 | logfile |
✔ | 5L08 | 8300 | 2024-03-16 | 2016-07-26 | 4.6 | 3.95 | — | 4.3 | 0.011 | 1.03 | 0.0 | 0.05 | 11.66 | 0.00 | 2.041 | 6.99 | 0.00 | 3.0 | 96.8 | 0.2 | -0.41 | 0.34 | 0.71 | — | 4.3 | 0.005 | 1.12 | 0.0 | 0.05 | 14.44 | 0.01 | 1.786 | 38.60 | 0.00 | 7.3 | 92.7 | 0.0 | -2.22 | 3.33 | 0.27 | 0.73 | — | 13617 | 1629 | 9 | 0 | 0 | 0 | 0 | logfile |
✔ | 8GoC | 34175 | 2024-03-17 | 2022-08-24 | 4.18 | 4.50 | 4.20 | 4.3 | 0.004 | 0.75 | 0.0 | 0.05 | 13.29 | 0.00 | 2.249 | 13.10 | 0.05 | 4.8 | 95.1 | 0.2 | -0.10 | 0.81 | 0.81 | — | 4.3 | 0.004 | 0.70 | 0.0 | 0.05 | 13.40 | 0.00 | 2.133 | 16.55 | 0.00 | 7.4 | 92.6 | 0.0 | -0.63 | 0.43 | 0.82 | 0.82 | — | 16942 | 2223 | 12 | 0 | 0 | 0 | 0 | logfile |
✔ | 8C9A | 16507 | 2024-03-17 | 2023-01-21 | 4.86 | 5.39 | 4.92 | 4.8 | 0.001 | 0.45 | 0.0 | 0.04 | 22.91 | 0.00 | 1.924 | 6.58 | 0.23 | 3.6 | 96.4 | 0.0 | 1.73 | 0.82 | 0.76 | — | 4.8 | 0.008 | 0.97 | 0.0 | 0.06 | 25.39 | 0.01 | 1.977 | 53.82 | 0.00 | 9.1 | 90.9 | 0.0 | -2.33 | 2.13 | 0.85 | 0.85 | — | 18059 | 525 | 7 | 650 | 0 | 0 | 0 | logfile |
✔ | 8G9Y | 29882 | 2024-03-17 | 2023-02-22 | 4.28 | 5.75 | 4.38 | 4.3 | 0.008 | 1.34 | 4.0 | 0.07 | 19.16 | 0.01 | 2.193 | 9.13 | 0.00 | 9.6 | 90.3 | 0.1 | -4.83 | 0.87 | 0.84 | — | 4.3 | 0.003 | 0.72 | 0.0 | 0.04 | 12.45 | 0.00 | 2.149 | 14.44 | 0.00 | 7.0 | 93.0 | 0.0 | -1.55 | 1.19 | 0.87 | 0.85 | — | 17135 | 1983 | 53 | 0 | 120 | 0 | 0 | logfile |
✔ | 8B7Q | 15899 | 2024-03-11 | 2022-09-30 | 4.02 | 4.26 | 3.86 | 4.2 | 0.003 | 0.60 | 0.0 | 0.04 | 9.87 | 0.00 | 2.234 | 4.41 | 2.94 | 3.9 | 95.6 | 0.5 | 0.29 | 0.66 | 0.80 | — | 4.2 | 0.003 | 0.66 | 0.0 | 0.04 | 12.58 | 0.00 | 2.170 | 8.68 | 0.00 | 3.9 | 96.1 | 0.0 | 1.55 | 1.23 | 0.68 | 0.82 | — | 3511 | 441 | 3 | 0 | 1 | 0 | 0 | logfile |
✔ | 8C97 | 16504 | 2024-03-23 | 2023-01-21 | 4.07 | 4.81 | 4.16 | 4.0 | 0.002 | 0.39 | 0.0 | 0.03 | 23.09 | 0.00 | 1.904 | 5.95 | 0.00 | 4.6 | 95.2 | 0.2 | 0.72 | 0.80 | 0.75 | — | 4.0 | 0.004 | 0.62 | 0.0 | 0.03 | 23.84 | 0.00 | 1.806 | 22.26 | 0.00 | 8.3 | 91.4 | 0.3 | -1.49 | 0.75 | 0.80 | 0.83 | — | 36163 | 1077 | 12 | 1292 | 0 | 0 | 0 | logfile |
✔ | 8oDV | 16819 | 2024-03-11 | 2023-03-09 | 4.7 | 4.86 | 4.41 | 4.7 | 0.007 | 1.10 | 0.0 | 0.05 | 14.06 | 0.01 | 2.192 | 25.76 | 0.00 | 4.6 | 95.4 | 0.0 | -4.04 | 0.71 | 0.79 | — | 4.7 | 0.003 | 0.75 | 0.0 | 0.04 | 13.98 | 0.00 | 2.161 | 13.18 | 0.00 | 3.3 | 96.7 | 0.0 | 0.51 | 1.46 | 0.71 | 0.79 | — | 8233 | 1022 | 5 | 0 | 1 | 0 | 0 | logfile |
✔ | 8BYi | 16326 | 2024-03-16 | 2022-12-13 | 4.1 | 3.68 | 3.94 | 4.0 | 0.009 | 0.72 | 0.0 | 0.21 | 12.07 | 0.00 | 2.132 | 24.08 | 0.00 | 2.3 | 97.7 | 0.0 | 1.89 | 0.61 | 0.78 | — | 3.7 | 0.003 | 0.62 | 0.0 | 0.04 | 11.52 | 0.00 | 2.230 | 12.03 | 0.00 | 4.0 | 96.0 | 0.0 | -0.32 | 1.14 | 0.64 | 0.80 | — | 13031 | 1600 | 15 | 0 | 12 | 9 | 0 | logfile |
✔ | 8SRM | 40735 | 2024-03-10 | 2023-05-05 | 4.46 | 5.07 | 4.47 | 4.4 | 0.003 | 0.51 | 0.0 | 0.03 | 4.38 | 0.00 | 2.233 | 4.32 | 0.00 | 4.0 | 96.0 | 0.0 | 2.57 | 0.82 | 0.84 | — | 4.3 | 0.006 | 0.64 | 0.0 | 0.04 | 5.47 | 0.00 | 2.070 | 5.40 | 0.00 | 7.2 | 92.8 | 0.0 | -0.25 | 1.59 | 0.83 | 0.86 | — | 5773 | 1163 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 7TGG | 25881 | 2024-03-17 | 2022-01-07 | 4.1 | 4.67 | — | 4.4 | 0.004 | 0.71 | 0.0 | 0.05 | 11.74 | 0.01 | 2.070 | 15.91 | 0.00 | 7.4 | 92.6 | 0.0 | -2.21 | 0.66 | 0.82 | — | 4.4 | 0.003 | 0.70 | 0.0 | 0.04 | 11.93 | 0.00 | 2.250 | 7.75 | 0.00 | 10.1 | 89.9 | 0.0 | -0.54 | 0.69 | 0.68 | 0.87 | — | 18255 | 2445 | 30 | 0 | 0 | 0 | 0 | logfile |
✔ | 8AFM | 15402 | 2024-03-11 | 2022-07-18 | 4.8 | 3.13 | 4.72 | 3.9 | 0.004 | 0.74 | 0.0 | 0.04 | 15.27 | 0.00 | 2.153 | 18.43 | 0.25 | 8.2 | 91.8 | 0.0 | -3.48 | 0.46 | 0.51 | — | 3.0 | 0.003 | 0.73 | 0.0 | 0.04 | 15.59 | 0.00 | 2.101 | 13.44 | 0.00 | 4.0 | 96.0 | 0.0 | -0.87 | 2.12 | 0.48 | 0.56 | — | 7842 | 1010 | 12 | 0 | 0 | 0 | 0 | logfile |
✔ | 8JUY | 36666 | 2024-03-19 | 2023-06-27 | 4.34 | 4.24 | 4.46 | 4.2 | 0.005 | 0.86 | 0.0 | 0.05 | 15.36 | 0.01 | 1.353 | 19.63 | 0.15 | 8.7 | 91.2 | 0.1 | -1.58 | 0.73 | 0.63 | — | 4.1 | 0.003 | 0.72 | 0.0 | 0.04 | 14.48 | 0.00 | 2.027 | 12.00 | 0.00 | 7.3 | 92.6 | 0.1 | -0.88 | 1.44 | 0.78 | 0.72 | — | 24554 | 3069 | 11 | 0 | 6 | 0 | 0 | logfile |
✔ | 7YNG | 33961 | 2024-03-10 | 2022-07-30 | 3.1 | 3.08 | 2.33 | 3.4 | 0.009 | 0.85 | 0.0 | 0.06 | 13.71 | 0.00 | 2.192 | 9.66 | 0.00 | 10.4 | 89.6 | 0.0 | -4.25 | 0.36 | 0.76 | 3.68 | 3.4 | 0.003 | 0.56 | 0.0 | 0.05 | 14.79 | 0.00 | 2.286 | 7.62 | 0.00 | 4.9 | 95.1 | 0.0 | -2.13 | 0.35 | 0.34 | 0.75 | 3.30 | 2628 | 378 | 6 | 0 | 0 | 0 | 0 | logfile |