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Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 6DBQ | 7847 | 2023-04-25 | 2018-05-03 | 4.22 | 4.34 | — | 4.2 | 0.005 | 1.05 | 2.0 | 0.04 | 23.25 | 0.01 | 1.539 | 28.02 | 0.12 | 10.4 | 89.5 | 0.1 | -4.19 | 0.81 | 0.82 | — | 4.2 | 0.004 | 0.74 | 0.0 | 0.04 | 21.84 | 0.00 | 1.691 | 20.03 | 0.00 | 6.5 | 93.4 | 0.1 | -1.35 | 1.52 | 0.81 | 0.82 | — | 19956 | 1939 | 10 | 222 | 6 | 0 | 0 | logfile |
✔ | 6oFJ | 20047 | 2023-04-21 | 2019-03-30 | 4.5 | 5.60 | 3.27 | 7.8 | 0.007 | 0.96 | 0.0 | 0.05 | 15.74 | 0.01 | 2.135 | 3.69 | 0.00 | 7.1 | 92.9 | 0.0 | -4.36 | 0.48 | 0.33 | — | 7.8 | 0.002 | 0.58 | 0.0 | 0.04 | 14.03 | 0.00 | 2.002 | 10.00 | 0.00 | 8.7 | 91.3 | 0.0 | -1.93 | 1.22 | 0.56 | 0.54 | — | 10310 | 650 | 2 | 0 | 0 | 0 | 5142 | logfile |
✔ | 5Z3V | 6883 | 2023-04-24 | 2018-01-08 | 4.22 | 3.73 | — | 3.7 | 0.004 | 0.63 | 0.0 | 0.04 | 23.01 | 0.00 | 2.160 | 12.97 | 0.00 | 7.8 | 92.2 | 0.0 | -2.72 | 0.69 | 0.74 | — | 3.7 | 0.004 | 0.66 | 0.0 | 0.04 | 24.67 | 0.00 | 2.130 | 12.01 | 0.00 | 4.7 | 95.2 | 0.2 | 0.43 | 0.85 | 0.70 | 0.72 | — | 16758 | 1339 | 12 | 292 | 3 | 0 | 0 | logfile |
✔ | 6DBo | 7846 | 2023-04-24 | 2018-05-03 | 4.4 | 4.68 | — | 4.4 | 0.009 | 1.35 | 0.0 | 0.07 | 22.20 | 0.01 | 1.874 | 25.40 | 0.00 | 6.8 | 92.4 | 0.7 | -4.15 | 0.86 | 0.82 | — | 4.4 | 0.004 | 0.78 | 0.0 | 0.04 | 19.66 | 0.00 | 2.126 | 20.40 | 0.00 | 4.8 | 95.2 | 0.0 | -0.96 | 4.04 | 0.87 | 0.84 | — | 16820 | 1786 | 10 | 128 | 6 | 0 | 0 | logfile |
✔ | 5FN2 | 3237 | 2023-04-21 | 2015-11-10 | 4.2 | 4.23 | — | 4.2 | 0.009 | 1.73 | 23.0 | 0.10 | 17.98 | 0.01 | 1.890 | 19.04 | 11.69 | 11.9 | 84.1 | 3.9 | -1.77 | 0.48 | 0.55 | — | 4.2 | 0.005 | 0.92 | 0.0 | 0.05 | 14.42 | 0.01 | 2.145 | 22.58 | 0.00 | 9.5 | 89.6 | 0.8 | -1.02 | 1.11 | 0.59 | 0.73 | — | 10276 | 1309 | 4 | 0 | 0 | 0 | 0 | logfile |
✔ | 6TNF | 10531 | 2023-04-21 | 2019-12-07 | 3.8 | 2.90 | 3.67 | 2.7 | 0.032 | 1.64 | 0.0 | 0.32 | 19.07 | 0.01 | 2.236 | 8.40 | 0.00 | 17.8 | 81.5 | 0.7 | -5.32 | 0.60 | 0.56 | — | 2.6 | 0.005 | 1.03 | 0.0 | 0.08 | 13.61 | 0.01 | 2.106 | 13.33 | 0.00 | 19.1 | 80.8 | 0.1 | -3.46 | 0.54 | 0.65 | 0.64 | — | 9559 | 2206 | 5 | 0 | 66 | 0 | 0 | logfile |
✔ | 7CYN | 30501 | 2023-04-25 | 2020-09-03 | 4.2 | 5.28 | — | 4.4 | 0.002 | 0.52 | 0.0 | 0.04 | 12.56 | 0.00 | 2.204 | 9.21 | 0.09 | 5.6 | 94.4 | 0.1 | -2.47 | 0.67 | 0.65 | — | 4.4 | 0.003 | 0.73 | 0.0 | 0.04 | 12.81 | 0.00 | 2.107 | 19.70 | 0.00 | 5.7 | 94.3 | 0.0 | -0.47 | 1.48 | 0.73 | 0.81 | — | 20432 | 2538 | 8 | 0 | 6 | 0 | 0 | logfile |
✔ | 7SCY | 25042 | 2023-04-26 | 2021-09-29 | 4.1 | 6.14 | — | 5.6 | 0.014 | 1.93 | 1.0 | 0.09 | 27.69 | 0.04 | 2.508 | 0.26 | 0.56 | 2.8 | 97.2 | 0.0 | -0.81 | 0.82 | 0.67 | — | 5.5 | 0.009 | 0.77 | 0.0 | 0.05 | 27.61 | 0.01 | 1.778 | 29.96 | 0.00 | 5.4 | 94.6 | 0.0 | -1.01 | 1.09 | 0.87 | 0.79 | — | 23206 | 850 | 11 | 294 | 0 | 0 | 10436 | logfile |
✔ | 7NL0 | 12453 | 2023-04-22 | 2021-02-19 | 3.5 | 3.08 | — | 3.0 | 0.006 | 0.71 | 0.0 | 0.04 | 29.75 | 0.00 | 2.147 | 12.17 | 0.00 | 4.1 | 95.9 | 0.0 | 0.67 | 0.78 | 0.81 | 3.10 | 3.1 | 0.004 | 0.61 | 0.0 | 0.03 | 29.99 | 0.00 | 2.219 | 10.71 | 0.00 | 3.0 | 97.0 | 0.0 | 2.21 | 0.24 | 0.78 | 0.81 | 2.84 | 11363 | 755 | 10 | 262 | 0 | 0 | 0 | logfile |
✔ | 7D76 | 30602 | 2023-04-20 | 2020-10-03 | 3.1 | 3.39 | — | 3.4 | 0.008 | 0.79 | 0.0 | 0.05 | 13.86 | 0.01 | 2.167 | 8.33 | 0.00 | 4.7 | 95.3 | 0.0 | -2.55 | 0.65 | 0.81 | 3.21 | 3.3 | 0.003 | 0.60 | 0.0 | 0.04 | 15.23 | 0.00 | 2.183 | 7.26 | 0.00 | 4.6 | 95.4 | 0.0 | 0.47 | 2.30 | 0.64 | 0.81 | 2.73 | 7015 | 874 | 6 | 0 | 7 | 0 | 0 | logfile |
✔ | 5Z3U | 6882 | 2023-04-24 | 2018-01-08 | 4.31 | 4.01 | — | 3.9 | 0.011 | 0.98 | 0.0 | 0.05 | 24.03 | 0.01 | 2.030 | 18.98 | 0.09 | 9.0 | 91.0 | 0.0 | -5.01 | 0.77 | 0.81 | — | 3.9 | 0.004 | 0.64 | 0.0 | 0.04 | 24.58 | 0.00 | 2.048 | 11.49 | 0.00 | 5.1 | 94.9 | 0.0 | 0.12 | 0.79 | 0.75 | 0.77 | — | 16766 | 1341 | 12 | 292 | 3 | 0 | 0 | logfile |
✔ | 7Q2Z | 13786 | 2023-04-20 | 2021-10-26 | 3.2 | 2.91 | 3.15 | 3.2 | 0.002 | 0.48 | 0.0 | 0.03 | 18.78 | 0.00 | 2.227 | 4.26 | 0.00 | 6.5 | 93.4 | 0.1 | -1.44 | 0.67 | 0.80 | 2.05 | 3.2 | 0.003 | 0.54 | 0.0 | 0.03 | 19.97 | 0.00 | 2.121 | 3.33 | 0.00 | 2.8 | 97.1 | 0.1 | 2.11 | 1.23 | 0.70 | 0.86 | 1.84 | 8258 | 902 | 4 | 46 | 0 | 0 | 0 | logfile |
✔ | 7RPW | 24624 | 2023-04-21 | 2021-08-04 | 4.38 | 4.64 | — | 4.4 | 0.003 | 0.57 | 0.0 | 0.04 | 19.19 | 0.00 | 1.756 | 18.05 | 9.97 | 11.3 | 88.6 | 0.1 | -2.82 | 0.77 | 0.68 | — | 4.4 | 0.003 | 0.66 | 0.0 | 0.04 | 18.63 | 0.00 | 1.110 | 15.84 | 0.00 | 7.5 | 92.4 | 0.1 | -3.06 | 3.75 | 0.77 | 0.67 | — | 10594 | 1179 | 10 | 62 | 5 | 0 | 0 | logfile |
✔ | 8C02 | 16353 | 2023-04-20 | 2022-12-15 | 4.09 | 4.26 | 4.03 | 4.2 | 0.004 | 0.83 | 0.0 | 0.04 | 13.16 | 0.01 | 2.225 | 19.86 | 0.44 | 4.1 | 95.9 | 0.0 | 1.51 | 0.58 | 0.77 | — | 4.2 | 0.004 | 0.79 | 0.0 | 0.04 | 13.27 | 0.00 | 2.201 | 17.06 | 0.00 | 4.3 | 95.7 | 0.0 | 1.78 | 1.54 | 0.58 | 0.77 | — | 4242 | 549 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 6NYB | 0541 | 2023-04-21 | 2019-02-11 | 4.1 | 4.15 | — | 4.0 | 0.014 | 1.76 | 3.0 | 0.09 | 14.33 | 0.00 | 2.070 | 6.97 | 3.66 | 5.4 | 94.4 | 0.2 | -3.02 | 0.75 | 0.74 | — | 4.0 | 0.005 | 0.80 | 0.0 | 0.04 | 13.88 | 0.00 | 1.864 | 12.75 | 0.00 | 4.2 | 95.8 | 0.0 | 0.25 | 2.59 | 0.79 | 0.80 | — | 8842 | 1097 | 6 | 0 | 6 | 0 | 0 | logfile |
✔ | 8DMB | 27533 | 2023-04-23 | 2022-07-08 | 3.1 | 3.10 | 3.12 | 3.1 | 0.005 | 0.91 | 0.0 | 0.05 | 15.85 | 0.01 | 2.091 | 0.28 | 0.74 | 2.5 | 97.5 | 0.0 | 0.39 | 0.69 | 0.81 | 4.57 | 3.1 | 0.003 | 0.55 | 0.0 | 0.03 | 16.17 | 0.01 | 1.969 | 3.37 | 0.00 | 3.1 | 96.9 | 0.0 | 0.52 | 0.57 | 0.70 | 0.83 | 4.27 | 14225 | 328 | 5 | 275 | 2 | 0 | 5728 | logfile |
✔ | 6SXA | 10337 | 2023-04-20 | 2019-09-25 | 3.6 | 5.82 | 4.21 | 4.6 | 0.010 | 1.37 | 5.0 | 0.09 | 15.20 | 0.01 | 2.245 | 15.25 | 3.18 | 10.9 | 88.9 | 0.2 | -4.66 | 0.83 | 0.67 | -0.05 | 4.6 | 0.003 | 0.83 | 0.0 | 0.04 | 15.04 | 0.00 | 2.240 | 11.90 | 0.00 | 6.0 | 93.9 | 0.1 | -0.30 | 1.73 | 0.91 | 0.85 | 0.41 | 7014 | 943 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 7BZY | 30263 | 2023-04-20 | 2020-04-29 | 3.7 | 5.07 | 3.67 | 2.9 | 0.005 | 1.03 | 0.0 | 0.05 | 7.60 | 0.00 | 2.175 | 11.89 | 0.00 | 15.0 | 84.6 | 0.3 | -5.26 | 0.62 | 0.47 | — | 3.4 | 0.003 | 0.82 | 0.0 | 0.05 | 6.08 | 0.00 | 2.106 | 13.54 | 0.00 | 14.3 | 85.7 | 0.0 | -3.30 | 1.23 | 0.85 | 0.74 | — | 6169 | 1260 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 6RVY | 10018 | 2023-04-21 | 2019-06-03 | 4.13 | 4.25 | 4.04 | 4.1 | 0.006 | 1.03 | 0.0 | 0.06 | 14.69 | 0.01 | 2.290 | 6.87 | 0.49 | 7.5 | 92.5 | 0.0 | -5.00 | 0.64 | 0.81 | — | 4.1 | 0.003 | 0.74 | 0.0 | 0.04 | 13.23 | 0.00 | 2.369 | 10.92 | 0.00 | 5.0 | 95.0 | 0.0 | -0.04 | 0.72 | 0.64 | 0.80 | — | 9627 | 1290 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 5UZ7 | 8623 | 2023-04-20 | 2017-02-24 | 4.1 | 4.03 | — | 4.0 | 0.008 | 1.17 | 0.0 | 0.06 | 11.04 | 0.01 | 2.267 | 7.82 | 0.37 | 4.4 | 95.6 | 0.0 | -2.30 | 0.64 | 0.75 | — | 4.0 | 0.004 | 0.76 | 0.0 | 0.04 | 13.79 | 0.00 | 2.197 | 14.85 | 0.00 | 5.6 | 94.4 | 0.0 | -0.38 | 1.40 | 0.67 | 0.78 | — | 7643 | 974 | 5 | 0 | 0 | 0 | 0 | logfile |