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Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 7WSM | 32760 | 2023-11-13 | 2022-01-30 | 3.25 | 3.65 | — | 3.6 | 0.011 | 1.41 | 0.0 | 0.05 | 16.83 | 0.01 | 2.253 | 11.36 | 0.81 | 6.5 | 93.5 | 0.0 | -1.23 | 0.62 | 0.82 | 1.57 | 3.6 | 0.003 | 0.77 | 0.0 | 0.04 | 17.01 | 0.01 | 2.222 | 8.62 | 0.00 | 3.9 | 96.1 | 0.0 | 0.82 | 0.51 | 0.61 | 0.82 | 1.21 | 3577 | 464 | 3 | 0 | 3 | 0 | 0 | logfile |
✔ | 8G88 | 29843 | 2023-11-16 | 2023-02-17 | 4.8 | 7.18 | 4.63 | 3.2 | 0.004 | 0.60 | 0.0 | 0.03 | 28.10 | 0.00 | 2.275 | 7.12 | 0.93 | 1.0 | 99.0 | 0.0 | 1.45 | 0.78 | 0.60 | — | 3.2 | 0.005 | 0.67 | 0.0 | 0.04 | 29.46 | 0.00 | 2.058 | 27.11 | 0.00 | 2.3 | 97.7 | 0.0 | 1.56 | 2.55 | 0.91 | 0.81 | — | 13995 | 891 | 11 | 336 | 0 | 0 | 0 | logfile |
✔ | 7PBW | 13307 | 2023-11-14 | 2021-08-02 | 2.1 | 1.98 | — | 2.1 | 0.009 | 0.99 | 0.0 | 0.05 | 12.27 | 0.01 | 2.243 | 2.93 | 0.00 | 0.0 | 100.0 | 0.0 | 3.14 | 0.78 | 0.90 | 7.90 | 2.1 | 0.004 | 0.76 | 0.0 | 0.04 | 14.47 | 0.01 | 2.150 | 7.99 | 0.00 | 0.0 | 100.0 | 0.0 | 4.46 | 0.28 | 0.77 | 0.90 | 7.32 | 9500 | 873 | 54 | 0 | 81 | 230 | 0 | logfile |
✔ | 7RRA | 24657 | 2023-11-14 | 2021-08-09 | 4.4 | 4.79 | — | 3.5 | 0.003 | 0.59 | 0.0 | 0.04 | 13.75 | 0.00 | 2.261 | 9.42 | 0.00 | 3.0 | 97.0 | 0.0 | 1.98 | 0.62 | 0.57 | — | 3.5 | 0.003 | 0.62 | 0.0 | 0.04 | 13.95 | 0.00 | 2.142 | 14.85 | 0.00 | 4.1 | 95.9 | 0.0 | 1.58 | 1.89 | 0.65 | 0.62 | — | 9608 | 1204 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 8G8B | 29845 | 2023-11-16 | 2023-02-17 | 4.3 | 7.82 | 4.33 | 3.2 | 0.004 | 0.64 | 0.0 | 0.04 | 29.04 | 0.00 | 2.061 | 8.20 | 1.98 | 1.8 | 98.1 | 0.1 | 1.94 | 0.87 | 0.75 | — | 3.2 | 0.005 | 0.68 | 0.0 | 0.04 | 28.83 | 0.00 | 2.167 | 22.64 | 0.00 | 2.8 | 97.2 | 0.0 | 1.33 | 1.93 | 0.90 | 0.81 | — | 14067 | 902 | 11 | 336 | 0 | 0 | 0 | logfile |
✔ | 5G06 | 3366 | 2023-11-19 | 2016-03-17 | 4.2 | 4.89 | — | 4.7 | 0.036 | 3.53 | 246.0 | 0.21 | 17.03 | 0.03 | 1.189 | 3.05 | 3.01 | 5.9 | 92.3 | 1.9 | -2.39 | 0.66 | 0.46 | — | 4.7 | 0.003 | 0.75 | 0.0 | 0.04 | 14.36 | 0.00 | 2.082 | 17.81 | 0.00 | 4.2 | 95.6 | 0.1 | -0.48 | 1.80 | 0.88 | 0.79 | — | 26794 | 3420 | 11 | 0 | 0 | 0 | 0 | logfile |
✔ | 6DMW | 7967 | 2023-11-17 | 2018-06-05 | 4.4 | 4.49 | — | 4.4 | 0.006 | 1.02 | 0.0 | 0.05 | 11.36 | 0.01 | 2.253 | 6.75 | 0.18 | 4.0 | 96.0 | 0.0 | -3.38 | 0.59 | 0.66 | — | 4.4 | 0.003 | 0.70 | 0.0 | 0.04 | 13.15 | 0.00 | 2.206 | 8.67 | 0.00 | 3.2 | 96.8 | 0.0 | 0.54 | 0.95 | 0.72 | 0.84 | — | 20546 | 2562 | 6 | 0 | 3 | 0 | 0 | logfile |
✔ | 7o17 | 12692 | 2023-11-15 | 2021-03-28 | 4.5 | 4.66 | — | 4.2 | 0.007 | 1.22 | 0.0 | 0.07 | 16.51 | 0.01 | 2.089 | 10.97 | 1.09 | 9.8 | 90.2 | 0.0 | -5.33 | 0.78 | 0.83 | — | 4.2 | 0.003 | 0.76 | 0.0 | 0.04 | 14.39 | 0.00 | 1.928 | 23.91 | 0.00 | 8.0 | 92.0 | 0.0 | -1.97 | 0.57 | 0.78 | 0.83 | — | 11679 | 1531 | 7 | 0 | 4 | 0 | 0 | logfile |
✔ | 7TX6 | 26155 | 2023-11-13 | 2022-02-07 | 3.3 | 3.60 | 3.29 | 3.5 | 0.008 | 0.90 | 1.0 | 0.05 | 12.44 | 0.01 | 2.327 | 6.69 | 0.62 | 3.0 | 97.0 | 0.0 | 2.51 | 0.53 | 0.76 | 2.79 | 3.6 | 0.003 | 0.71 | 1.0 | 0.05 | 15.51 | 0.01 | 2.189 | 6.37 | 0.00 | 3.3 | 96.7 | 0.0 | 1.64 | 1.61 | 0.53 | 0.77 | 2.32 | 3169 | 398 | 1 | 0 | 2 | 0 | 0 | logfile |
✔ | 7LV9 | 23530 | 2023-11-14 | 2021-02-24 | 4.5 | 7.82 | 4.59 | 4.4 | 0.003 | 0.64 | 0.0 | 0.04 | 27.26 | 0.00 | 1.334 | 3.02 | 0.00 | 3.2 | 96.8 | 0.0 | -3.35 | 0.82 | 0.66 | — | 4.4 | 0.005 | 0.67 | 0.0 | 0.04 | 29.32 | 0.00 | 2.143 | 21.19 | 0.00 | 3.9 | 96.1 | 0.0 | 1.21 | 1.93 | 0.90 | 0.85 | — | 8238 | 581 | 8 | 190 | 0 | 0 | 0 | logfile |
✔ | 7NPU | 12521 | 2023-11-17 | 2021-02-28 | 4.48 | 4.74 | 4.43 | 3.8 | 0.008 | 1.19 | 0.0 | 0.06 | 11.87 | 0.01 | 2.086 | 1.37 | 0.37 | 1.8 | 98.1 | 0.1 | -0.61 | 0.66 | 0.68 | — | 3.8 | 0.003 | 0.60 | 0.0 | 0.04 | 12.55 | 0.00 | 1.902 | 8.02 | 0.00 | 2.8 | 97.2 | 0.0 | 1.44 | 3.28 | 0.69 | 0.76 | — | 126727 | 8230 | 24 | 0 | 0 | 0 | 64397 | logfile |
✔ | 7Ai5 | 11791 | 2023-11-15 | 2020-09-26 | 4.4 | 4.82 | 4.47 | 4.4 | 0.014 | 1.85 | 5.0 | 0.10 | 17.79 | 0.01 | 2.472 | 3.75 | 1.14 | 3.3 | 96.7 | 0.0 | -2.02 | 0.86 | 0.70 | — | 4.3 | 0.003 | 0.66 | 0.0 | 0.04 | 16.95 | 0.00 | 2.155 | 14.39 | 0.00 | 2.1 | 97.9 | 0.0 | 0.17 | 0.95 | 0.89 | 0.78 | — | 13376 | 1576 | 6 | 44 | 2 | 0 | 0 | logfile |
✔ | 7YCH | 33739 | 2023-11-14 | 2022-07-01 | 3.09 | 4.46 | 3.30 | 3.5 | 0.002 | 0.48 | 0.0 | 0.02 | 14.59 | 0.00 | 1.420 | 15.91 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.92 | 0.84 | — | 3.6 | 0.007 | 0.67 | 0.0 | 0.04 | 15.50 | 0.00 | 1.805 | 31.05 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.90 | 0.94 | 0.88 | — | 8661 | 0 | 2 | 404 | 4 | 0 | 0 | logfile |
✔ | 6VXJ | 21440 | 2023-11-14 | 2020-02-22 | 4.1 | 4.12 | — | 4.1 | 0.007 | 1.02 | 0.0 | 0.05 | 16.27 | 0.01 | 2.251 | 6.79 | 3.32 | 9.5 | 90.5 | 0.0 | -5.74 | 0.57 | 0.78 | — | 4.1 | 0.006 | 0.89 | 0.0 | 0.05 | 13.89 | 0.00 | 2.100 | 15.36 | 0.00 | 9.4 | 90.6 | 0.0 | -2.29 | 0.73 | 0.58 | 0.80 | — | 8895 | 1132 | 4 | 0 | 3 | 0 | 0 | logfile |
✔ | 7PDG | 13337 | 2023-11-14 | 2021-08-05 | 4.3 | 4.51 | — | 3.1 | 0.005 | 0.82 | 0.0 | 0.05 | 14.59 | 0.00 | 2.161 | 16.17 | 0.00 | 5.2 | 94.8 | 0.0 | -0.49 | 0.58 | 0.72 | — | 3.1 | 0.003 | 0.73 | 0.0 | 0.04 | 14.74 | 0.00 | 2.173 | 12.63 | 0.00 | 4.3 | 95.7 | 0.0 | 0.21 | 0.88 | 0.58 | 0.72 | — | 7642 | 970 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 8B0M | 15788 | 2023-11-14 | 2022-09-07 | 3.01 | 3.39 | 3.03 | 3.3 | 0.003 | 0.66 | 0.0 | 0.04 | 10.77 | 0.00 | 2.258 | 5.92 | 0.48 | 5.7 | 94.3 | 0.0 | -0.18 | 0.57 | 0.84 | 5.07 | 3.3 | 0.003 | 0.56 | 0.0 | 0.04 | 13.28 | 0.00 | 2.239 | 6.42 | 0.00 | 5.9 | 94.1 | 0.0 | 0.50 | 1.70 | 0.58 | 0.86 | 4.35 | 4015 | 508 | 1 | 0 | 1 | 0 | 0 | logfile |
✔ | 7E2C | 30954 | 2023-11-18 | 2021-02-05 | 4.18 | 4.23 | — | 4.1 | 0.008 | 1.50 | 3.0 | 0.08 | 15.12 | 0.01 | 1.675 | 10.10 | 0.94 | 15.3 | 83.6 | 1.1 | -5.41 | 0.78 | 0.68 | — | 4.1 | 0.003 | 0.77 | 1.0 | 0.05 | 14.06 | 0.00 | 2.118 | 12.98 | 0.00 | 13.0 | 86.7 | 0.2 | -3.20 | 0.71 | 0.76 | 0.68 | — | 23020 | 3295 | 11 | 0 | 0 | 0 | 0 | logfile |
✔ | 8F7W | 28911 | 2023-11-14 | 2022-11-20 | 3.19 | 3.44 | 3.14 | 3.4 | 0.004 | 0.80 | 0.0 | 0.06 | 8.06 | 0.01 | 2.282 | 3.96 | 0.10 | 1.9 | 98.1 | 0.0 | -1.80 | 0.58 | 0.75 | 1.92 | 3.4 | 0.003 | 0.58 | 0.0 | 0.04 | 13.69 | 0.00 | 2.162 | 8.41 | 0.00 | 2.1 | 97.9 | 0.0 | 0.69 | 1.23 | 0.60 | 0.81 | 2.39 | 9087 | 1145 | 7 | 0 | 5 | 0 | 0 | logfile |
✔ | 6oGE | 20055 | 2023-11-15 | 2019-04-02 | 4.36 | 4.64 | — | 4.4 | 0.008 | 1.16 | 0.0 | 0.06 | 10.69 | 0.01 | 2.203 | 12.45 | 0.16 | 13.5 | 86.4 | 0.1 | -4.34 | 0.80 | 0.81 | — | 4.4 | 0.004 | 0.81 | 0.0 | 0.05 | 12.35 | 0.01 | 2.118 | 23.53 | 0.00 | 11.6 | 88.4 | 0.1 | -2.97 | 0.90 | 0.80 | 0.80 | — | 11494 | 1489 | 7 | 0 | 9 | 0 | 0 | logfile |
✔ | 7KAP | 22779 | 2023-11-15 | 2020-10-01 | 4.1 | 4.58 | 4.09 | 4.2 | 0.003 | 0.55 | 0.0 | 0.04 | 11.24 | 0.00 | 2.205 | 8.00 | 0.00 | 2.3 | 97.7 | 0.0 | -1.05 | 0.62 | 0.83 | — | 4.2 | 0.003 | 0.60 | 0.0 | 0.04 | 12.31 | 0.00 | 2.187 | 9.26 | 0.00 | 2.9 | 97.1 | 0.0 | 2.08 | 0.64 | 0.64 | 0.85 | — | 10715 | 1342 | 7 | 0 | 56 | 0 | 0 | logfile |